PI0009309 (gene) Melon (PI 482460) v1

Overview


Name	PI0009309
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	50S ribosomal protein l3
Location	chr06: 5772533 .. 5777139 (-)
RNA-Seq Expression	PI0009309
Synteny	PI0009309

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTGAATGTGATCGATTTTGCTTTCTTAGAACCCTAAACCCCAAGTCGCAACCTGCTGCCGCTCCCTTACACTGCATCAGTTGCATAACACGAGAGAGGAAGACAATGAAATTTCATAGTCTCCGAGATCGAAATCAACCCTAAAATTTGAACCAAACCCTTCTTCTTCCTATCCGATTTTTCCCAACTTCGCATCATAATCGTTGTGATTGGTTCTCACCATGTCAGCTTTATCTAGAGGTCTCATTTCTCGTTTTCGTATTCTCTCGATCAATTCCGGCGCTTCTCATTCAATTACTTCTTCTTCTCCTTCTTCTTCTTCAAGGACAAATGCGTCCTGTTACTACTTCTTCCGTGCTTTCAGTACCCAGGATTTAACTCAGGCTAGCGATGGGTCTTTGCCAGCTTCTTCGATTATTGAAGCTAAACCTCGTACCATGAGCAGTAACTCTACGCGGACGGGTGTTATTGCCGTCAAGTGTGGAATGTCGGCGTTGTGGGATAAATGGGGAGCTAGGATACCCATCACTGTGCTCTGGGTTGATGATAATATCGTGTCTCAGGTCAAGACCATTGAGAAAGAAGGTATCACAGCTCTACAGGTACTGTTCAAATCTCTTATTCTCATTCTCATTCCGTCTGTGTTGTGTTTATTATTATTATTAGTTGCTGTTGATACTTAGCTGAAATTAAGAGCATGACCGAAACCTAGAAAACGACTTCGTTGGCCTTGGCATTGTTAGTTTCTATCACAGTCGTAGAACCAAAGAAAGCAGAAATGAAATGGGACTTTGGCGTAATGATGTTAAGGACGCTACTTCGACCTAATGGATTTGAGTCCTTGTCTGTAGTTAGGGTCGAGCTCTCTTTTCTTGTTGAGCCCTTTTTTTTGCTCTTGTATATTTTTTCATTTTTCTCAACCAAAGTGTGGTTTATATATATAATATATATATATATTCTATTGTGTAAGAGGGATTTTAAGCTGTTGTTCTGGCAATTCCATTGATTTTATTATTATACTGAACTGAACTGCACATTGTTGTTTTGGACCTGAATTTCACCATCTCATATCATGTCATCACTTCCATCCATACTCTTAGCTAGACATAAGCATTCGTAACTTTTTTAATTTTAATAGCCACGATATCGATGTTGAAGGTTGTACTCCTTGCATCATGCTTATGGCCATTCCCACTAATCTTCAGTGTTGATTTCACTCTTTCTGTAAAAAGGAAAAAGTTGTCTCCACCGTTTGACCATAATTTTGAGGTTCTTTTTTTTTCATTTCATACATATTTTATCTCCTACGACTTGAATTTATTGACCAAAGGTTCTATGGTATGGTGCTAGTTAGATTGGCTGTGGACAGAAGAAGGAAAAGCATTTGAGTAAACCTGAATTAGGCCATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAGCTGAGGGAGTTCCCAGTGTCACAAGATGCACTTCTTCCAGTTGGTACAGAAATTGGCGCTCGCCATTTTGTTCCTGGACAGTATGTCGATGTGACAGGAACAAGTAGAGGGAAAGGTTTTCAGGTGAATCTATTGAACCATTACTCCATTCGTTTTTTAACTCACAACCTTTGTTCCTTTTTCTTTTCATTCAATTCCTTATATTTGCTATTATGGTAGTCAGTAACATATCAAAATTACTTAAACAGTTAAATGTCATCGTGGGAACATTGATTCATATAATTGCAGGTCTCTGTCTGAATTTAGGTCAAAGTACCAATTAAAAGCTATTTAATCATCAATGACAATTGAATGAGCAGAACTATGAAATTGAACTGCATGAAGTGATAACTGTAAACTAGCGCGGAGTTGTGAAAATTTTTGTTGGTTCCCTTTCTCTTTCTTCCTTGGCATTGACGTTTCTAGTCAATAATGTTCTTCAACATTATTCTATATGTACTGATATTTCTTCCAGTGATTTTCAAATATGCTATTTTAATCATGGTAGCACTGCATAATGTGATATCAAGAACATGAACTATTGGCTTTTTCATCAAGCATTACTGATGATGCAAGACTTGTTATGTTTAACTACCCAAAACTTTCTTTGATGTCCAACTTACAACTCAAACTTTAACTTATAGAGCAAGTCAAATCCAATTAAAGTATCAAGTTACACCAAATGATCATATAGACCTTATCTAGCAAAACAAGTGACAAAACTCAAAGAATGCTATCAAGTGACAAAGAATGCTAAAACCACAAGAGTAAATATCTTTAGCTCAAAACTCAAGTGAACATCCTCATGGTGTCCCACTCCACTAATAACTAAACTCCAAAATCTAAAATGTCCACTGAAGAGTTAAAATGAGAGTTTTAGCAGAAACAACTATTGGACAAGTTATGCATGCTTGTTTGTCATTGTCAGCTTCCAAATTGTATCATTGCAAGCTGTACTTTGGGTTGTGGGCATTATAATAGATTTAGTAAGCAGTAAGCAAATATTTACATGAGAGTGACACACAATGGCCAAAATATTTCGATATTTTATCATGATTTAACCTAGTTTTAGTCGTGCTTTAACTTGCTTATTGGCTTGCATCCTCAATTGCCTGACTTGCTGCATGGTCTGCAAGATACAAATTAACCATCAAAGTTTCAGCGAGATATATGTGTGTATTATCATAAGATAACATGAACAATTTCTCAATGAGCTCATGTACATCCTGGAGACAAAAATAATAAAAAAAAACGCAATAAATTGATGTAAAAGTATACAAAACATATATAGGGTTTAATATATATATATATAAATATATTAAGGAGCTAACCCTGTCGAAAGATGTATGTAGCTGATCATTTATGTGGAGCTGTGATCGTTGCTTTGTCTTCTTTCATGTTTGTGCTTGTTTGGGTAATATCAAGCTGTATATCCGTGTCCTGAAAATTCTTCACGAGATCCAGAATTATTATAACAAAATTGTTTTCTTTCTTACCTTTTGTAAATGGTATAAAATCTTTTCCATGAAAGTGATGTCTCTCATTGCTAATCCTTTATCTAATTGTGTTCAGGGAGTGATGAAAAGGCATGGTTTCAAAGGAATGCCTGCATCCCACGGAGCATCATTATCTCATAGGAGCGGTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTGAGTTTATGTTTCCATGATGGTTTACGGATTTAACTCTGCTTGTGGAATGAATTACTGTCTAGCAACATGTGGAAAATTTCACGGGTTACAATCTTGAAAATAATATTCTTTTTGTTGTTGCCTTATTTCTGGTGAAGTTTAATGTTTATGAAGTTTGAAAAGACTTACACTCTTGAATCCTCTTTCACATACCTACCTTATCTTCTTCAGTTCCGTGATTCAATAGAACATATTGAGTTTTGTTTGATTTGCTTTGCACATAGAACCATGGAAACCTGTGTCGAATTTTAGATGCTTGTTCCTGTTTCTAAATACAGAGAAAAGAAAATCCAAAAGTGTCGAATAACTATTTATGATCTGTTTAGAGCAAGTTCTAGTCTTTTTTCACTGTATTCCATATAATTTATGATGGTGAGAAACACCTGCTTATTTTGCAGGTTTTCAAAGGCAGAAAGATGGCTGGGCGTATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGATATACAAAATTGATGCTGCAAGGAACTTGATATGGGTGAAAGGACCAGTAAGTTTCTTCTAAAACCGAATTTCAAACTCTTGATGTGATCCCCTATATAGAGTCCTTGTTTTGTACATAAATATCTTACTCTTGGGACATCATGGTCTGAGGTTTTTGCTGTGCACAACTCCACCTCTTTTTAGATCCCCGGCGCTGAAGGAAGCTTTGTATTTATAAAAGATGCCATGCACAAGAAACTCAATAAGTCGGCAATCCTTCCATTTCCTACGTACTTTGCAACCGATGGTGAGGACACAGACAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGATTGGAGATTGATTAGGAGTTGGCCTTCAGCGCAAGTTGTGCACTTTGCTCTGCTTTTTCCTTTTATTGATGGTGTTTGCAGGTATGCTTATTGACCAACCCTTACGGGTAGTCAATTTCACTATAGAACTGCAGTCAGAGGATCTCTCCGAGGTGATCGAATCTTCTAATCCGATGGTATTCTTCTACAGTTATATTTTTCTTTTTAAAAATTTTCTCACCATCTCAAACCTGTACCGGAAAAAACCATTTTGAAATAAAGAGTAGAGAGAAGAAAAAAAAAAGCTATGATTATTCAGAATTTTTGGTTGAGTGATCTTATAACTTCTTTTGGGAATTGAAGTTAATGTTTATGTGAACTTAGAAGAAGATATTGTTCATGGCTGCCAATTGCGTTAGCAATTTCTTACTATTCGAACCAAGTGTCAAACCTCTCTTTTCTTTATATTATTTATAATGTAATTCCTTTGCATTTTGATTTTGGAATTGTGATCCGTTCTATAAACAATGTTTGACTCATGTTGAGTCAAAAGTCAACATGAATTGATGGTTCAAAATGTGAAGTTTAATCAAAATGATACATTTCAGGAAA

mRNA sequence

ATTTTGAATGTGATCGATTTTGCTTTCTTAGAACCCTAAACCCCAAGTCGCAACCTGCTGCCGCTCCCTTACACTGCATCAGTTGCATAACACGAGAGAGGAAGACAATGAAATTTCATAGTCTCCGAGATCGAAATCAACCCTAAAATTTGAACCAAACCCTTCTTCTTCCTATCCGATTTTTCCCAACTTCGCATCATAATCGTTGTGATTGGTTCTCACCATGTCAGCTTTATCTAGAGGTCTCATTTCTCGTTTTCGTATTCTCTCGATCAATTCCGGCGCTTCTCATTCAATTACTTCTTCTTCTCCTTCTTCTTCTTCAAGGACAAATGCGTCCTGTTACTACTTCTTCCGTGCTTTCAGTACCCAGGATTTAACTCAGGCTAGCGATGGGTCTTTGCCAGCTTCTTCGATTATTGAAGCTAAACCTCGTACCATGAGCAGTAACTCTACGCGGACGGGTGTTATTGCCGTCAAGTGTGGAATGTCGGCGTTGTGGGATAAATGGGGAGCTAGGATACCCATCACTGTGCTCTGGGTTGATGATAATATCGTGTCTCAGGTCAAGACCATTGAGAAAGAAGGTATCACAGCTCTACAGATTGGCTGTGGACAGAAGAAGGAAAAGCATTTGAGTAAACCTGAATTAGGCCATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAGCTGAGGGAGTTCCCAGTGTCACAAGATGCACTTCTTCCAGTTGGTACAGAAATTGGCGCTCGCCATTTTGTTCCTGGACAGTATGTCGATGTGACAGGAACAAGTAGAGGGAAAGGTTTTCAGGGAGTGATGAAAAGGCATGGTTTCAAAGGAATGCCTGCATCCCACGGAGCATCATTATCTCATAGGAGCGGTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTTTTCAAAGGCAGAAAGATGGCTGGGCGTATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGATATACAAAATTGATGCTGCAAGGAACTTGATATGGGTGAAAGGACCAATCCCCGGCGCTGAAGGAAGCTTTGTATTTATAAAAGATGCCATGCACAAGAAACTCAATAAGTCGGCAATCCTTCCATTTCCTACGTACTTTGCAACCGATGGTGAGGACACAGACAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGATTGGAGATTGATTAGGAGTTGGCCTTCAGCGCAAGTTGTGCACTTTGCTCTGCTTTTTCCTTTTATTGATGGTGTTTGCAGGTATGCTTATTGACCAACCCTTACGGGTAGTCAATTTCACTATAGAACTGCAGTCAGAGGATCTCTCCGAGGTGATCGAATCTTCTAATCCGATGGTATTCTTCTACAGTTATATTTTTCTTTTTAAAAATTTTCTCACCATCTCAAACCTGTACCGGAAAAAACCATTTTGAAATAAAGAGTAGAGAGAAGAAAAAAAAAAGCTATGATTATTCAGAATTTTTGGTTGAGTGATCTTATAACTTCTTTTGGGAATTGAAGTTAATGTTTATGTGAACTTAGAAGAAGATATTGTTCATGGCTGCCAATTGCGTTAGCAATTTCTTACTATTCGAACCAAGTGTCAAACCTCTCTTTTCTTTATATTATTTATAATGTAATTCCTTTGCATTTTGATTTTGGAATTGTGATCCGTTCTATAAACAATGTTTGACTCATGTTGAGTCAAAAGTCAACATGAATTGATGGTTCAAAATGTGAAGTTTAATCAAAATGATACATTTCAGGAAA

Coding sequence (CDS)

ATGTCAGCTTTATCTAGAGGTCTCATTTCTCGTTTTCGTATTCTCTCGATCAATTCCGGCGCTTCTCATTCAATTACTTCTTCTTCTCCTTCTTCTTCTTCAAGGACAAATGCGTCCTGTTACTACTTCTTCCGTGCTTTCAGTACCCAGGATTTAACTCAGGCTAGCGATGGGTCTTTGCCAGCTTCTTCGATTATTGAAGCTAAACCTCGTACCATGAGCAGTAACTCTACGCGGACGGGTGTTATTGCCGTCAAGTGTGGAATGTCGGCGTTGTGGGATAAATGGGGAGCTAGGATACCCATCACTGTGCTCTGGGTTGATGATAATATCGTGTCTCAGGTCAAGACCATTGAGAAAGAAGGTATCACAGCTCTACAGATTGGCTGTGGACAGAAGAAGGAAAAGCATTTGAGTAAACCTGAATTAGGCCATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAGCTGAGGGAGTTCCCAGTGTCACAAGATGCACTTCTTCCAGTTGGTACAGAAATTGGCGCTCGCCATTTTGTTCCTGGACAGTATGTCGATGTGACAGGAACAAGTAGAGGGAAAGGTTTTCAGGGAGTGATGAAAAGGCATGGTTTCAAAGGAATGCCTGCATCCCACGGAGCATCATTATCTCATAGGAGCGGTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTTTTCAAAGGCAGAAAGATGGCTGGGCGTATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGATATACAAAATTGATGCTGCAAGGAACTTGATATGGGTGAAAGGACCAATCCCCGGCGCTGAAGGAAGCTTTGTATTTATAAAAGATGCCATGCACAAGAAACTCAATAAGTCGGCAATCCTTCCATTTCCTACGTACTTTGCAACCGATGGTGAGGACACAGACAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGATTGGAGATTGA

Protein sequence

MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSLPASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFVPGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTYFATDGEDTDKLEPLVADLGEVDPFMIGD

Homology

[Close]

BLAST of PI0009309 vs. ExPASy Swiss-Prot
Match: Q9LRN8 (50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL3B PE=1 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-124
Identity = 236/332 (71.08%), Postives = 265/332 (79.82%), Query Frame = 0


Query: 1   MSALSRGLISRF-RILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGS 60
           M+A+ RGL+SR  + LSI      SIT S  SS S  + S ++  R FS+        GS
Sbjct: 1   MAAVPRGLLSRINQFLSI-----RSITPS--SSESLPHCSSFFLIRRFSSDTGLMDGGGS 60

Query: 61  ---LPASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVK 120
                 + IIEAK   MSS S RTG+IAVKCGM+ALWDKWG RIPI++LWVDDNIVSQVK
Sbjct: 61  DIIGAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVK 120

Query: 121 TIEKEGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGA 180
           T+EKEGI ALQIGCGQKK KHLSK  +GHFRAQGVPLKRKLREFPV++DALLPVGT +G 
Sbjct: 121 TVEKEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGV 180

Query: 181 RHFVPGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKG 240
           RHFVPGQYVDVTG +RGKGFQG MKRHGF GMPASHGASLSHRSGGSTGQRDAPGKVFKG
Sbjct: 181 RHFVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKG 240

Query: 241 RKMAGRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILP 300
           RKMAGRMG  QRTVKNVW+YKID ARNL+WV+G +PGAEG+FVFIKDA  KK + S  LP
Sbjct: 241 RKMAGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISK-LP 300

Query: 301 FPTYFATDGEDTDKLEPLVADLGEVDPFMIGD 329
           FPTY A + ED  +LEPLVADLGEVDPFM+ +
Sbjct: 301 FPTYLAPEDEDPSELEPLVADLGEVDPFMLAE 324

[Close]

BLAST of PI0009309 vs. ExPASy Swiss-Prot
Match: Q2G8Y0 (50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=rplC PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.4e-59
Identity = 112/220 (50.91%), Postives = 161/220 (73.18%), Query Frame = 0


Query: 79  RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKEKHL 138
           RTGVIA K GM+ L+ + G  +P+TVL +++  V  V+T E++G  ALQ+G G+ K+K++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKNV 61

Query: 139 SKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFVPGQYVDVTGTSRGKGFQG 198
           +KP+  HF    VPLK ++ EF V+ DALL VG+ I A HFVPGQYVD+TG ++GKGFQG
Sbjct: 62  AKPQREHFAKAEVPLKMEVAEFRVADDALLDVGSTIAASHFVPGQYVDITGQTQGKGFQG 121

Query: 199 VMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 258
            MKR GF GM A+HG S+SHR+ GSTG R  PG+VFK +KMAG MG +QRT +N+ + + 
Sbjct: 122 AMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVVRT 181

Query: 259 DAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFP 299
           D  R LI+VKG +PG++ +++ ++DA+  K+++ A  P+P
Sbjct: 182 DDERGLIFVKGSVPGSKNAWLLVRDAV--KVSRHAEAPYP 219

[Close]

BLAST of PI0009309 vs. ExPASy Swiss-Prot
Match: Q5LLU6 (50S ribosomal protein L3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=rplC PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.5e-58
Identity = 119/220 (54.09%), Postives = 154/220 (70.00%), Query Frame = 0


Query: 79  RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKEKHL 138
           R+G+IA K GM+ L+ + G +IP+TVL +D+  V   +T EK+G TA+Q+G G  K K +
Sbjct: 2   RSGIIAKKVGMTRLFMEDGKQIPVTVLQLDNLQVVAQRTTEKDGYTAVQLGAGTPKIKRV 61

Query: 139 SKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFVPGQYVDVTGTSRGKGFQG 198
           SK   GHF AQ V  KRKL EF VS+DAL+ VG EI A HF+ GQ VDV+GTS GKGF G
Sbjct: 62  SKAMRGHFAAQKVEPKRKLAEFRVSEDALIEVGAEISAEHFLTGQKVDVSGTSIGKGFAG 121

Query: 199 VMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 258
            MKRH F G+ ASHG S+SHRS GSTGQ   PG+VFKG+KMAG MG  + T +N+ + K 
Sbjct: 122 AMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLEVVKT 181

Query: 259 DAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFP 299
           DA R L+++KG +PG +  +V +KDA+ KK  +   LPFP
Sbjct: 182 DAERGLVFIKGAVPGPKSGWVTVKDAVKKKAPEG--LPFP 219

[Close]

BLAST of PI0009309 vs. ExPASy Swiss-Prot
Match: Q5FTY3 (50S ribosomal protein L3 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rplC PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.4e-58
Identity = 119/224 (53.12%), Postives = 151/224 (67.41%), Query Frame = 0


Query: 79  RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKEKHL 138
           RTG+IA K GM+ L+ + G  +P+TVL +D+  V   +T E++G TA+Q+G G  K K++
Sbjct: 2   RTGLIAKKLGMTRLFKEDGTHVPVTVLHLDNVEVVDARTNERDGYTAIQLGLGNAKVKNV 61

Query: 139 SKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFVPGQYVDVTGTSRGKGFQG 198
           +K   GHF    V  KR L EF VS+DALL  GT++ A HFV GQ VDVTG S+GKGF G
Sbjct: 62  TKANRGHFARTKVEPKRHLAEFRVSEDALLEAGTKLSAAHFVVGQKVDVTGQSKGKGFAG 121

Query: 199 VMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 258
           VMKRH F G+ ASHG S+SHRS GSTGQR  PGKVFKG+KMAG MG ++ T  N+ I  +
Sbjct: 122 VMKRHNFAGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGDERVTTLNLEIAAV 181

Query: 259 DAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTYFA 303
           D  RNLI V+G IPGA+   V I+DA+ K  +  A  P  T  A
Sbjct: 182 DEERNLIMVRGAIPGAKNGLVLIRDAIKKARHADAPYPAATVAA 225

[Close]

BLAST of PI0009309 vs. ExPASy Swiss-Prot
Match: Q2W2J1 (50S ribosomal protein L3 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rplC PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-57
Identity = 115/220 (52.27%), Postives = 154/220 (70.00%), Query Frame = 0


Query: 79  RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKEKHL 138
           R+G+IA K GM+ ++ + G  +P+TVL VD   V   +++EK+G  A+Q+G G  K K++
Sbjct: 2   RSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTCQVVSTRSVEKDGYVAVQLGAGTAKVKNV 61

Query: 139 SKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFVPGQYVDVTGTSRGKGFQG 198
           SKP   +F    V  K+KL EF V+ + LL VGTE+ A HF+PGQYVDVTGT+ GKGF G
Sbjct: 62  SKPARANFAKAKVEPKKKLVEFRVAPENLLEVGTELSAAHFIPGQYVDVTGTTIGKGFAG 121

Query: 199 VMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 258
            MKR  F+G+ A+HG S+SHRS GSTGQR  PGKVFKG+KMAG MG +Q T +N+ +   
Sbjct: 122 GMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLTVVST 181

Query: 259 DAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFP 299
           DA R LI VKG +PG EGS+V ++DA+ +KL     +PFP
Sbjct: 182 DADRGLILVKGSVPGHEGSWVLVRDAVKRKLPDG--VPFP 219

[Close]

BLAST of PI0009309 vs. ExPASy TrEMBL
Match: E5GC40 (50S ribosomal protein l3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 6.4e-177
Identity = 317/328 (96.65%), Postives = 322/328 (98.17%), Query Frame = 0


Query: 1   MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60
           MSALSRGLISR R+LSINSGASHS+TSSS SSSSRTNASCYYFFRAFSTQDLTQASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           PASSIIEAKP TMSSNS RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFV 180
           EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKL+EFPVSQDALLPVGTEIGARHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTG SRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTY 300
           GRMGGKQRTVKNVWIYKID ARNLIWVKGPIPGAEGSFVFIKDAM+K+LNKSAILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 329
           FATDGEDTDKLEPLVADLGEVDPFMIGD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 328

[Close]

BLAST of PI0009309 vs. ExPASy TrEMBL
Match: A0A1S3AYD1 (50S ribosomal protein L3-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483925 PE=3 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 6.4e-177
Identity = 317/328 (96.65%), Postives = 322/328 (98.17%), Query Frame = 0


Query: 1   MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60
           MSALSRGLISR R+LSINSGASHS+TSSS SSSSRTNASCYYFFRAFSTQDLTQASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           PASSIIEAKP TMSSNS RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFV 180
           EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKL+EFPVSQDALLPVGTEIGARHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTG SRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTY 300
           GRMGGKQRTVKNVWIYKID ARNLIWVKGPIPGAEGSFVFIKDAM+K+LNKSAILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 329
           FATDGEDTDKLEPLVADLGEVDPFMIGD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 328

[Close]

BLAST of PI0009309 vs. ExPASy TrEMBL
Match: A0A0A0LAV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171140 PE=3 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.0e-174
Identity = 312/328 (95.12%), Postives = 318/328 (96.95%), Query Frame = 0


Query: 1   MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60
           MSALSRGLISRFR+LSINS ASHSIT+SS SSSSRTNASCYYFFRAFSTQDLTQASDGSL
Sbjct: 1   MSALSRGLISRFRLLSINSSASHSITTSSSSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
            ASSI EAKP TM SNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  SASSIFEAKPGTMGSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFV 180
           EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGVRHFV 180

Query: 181 PGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTG SRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTY 300
           GRMGGKQRTVKNVWIYKID ARNL+WVKGPIPGAEG+FVFIKDA++KKLNKSAILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLMWVKGPIPGAEGNFVFIKDAVYKKLNKSAILPFPTY 300

Query: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 329
           FATDGEDTDKLEPLVADLGEVDPFM GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMTGD 328

[Close]

BLAST of PI0009309 vs. ExPASy TrEMBL
Match: A0A5A7U8A2 (50S ribosomal protein L3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00220 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.6e-172
Identity = 310/321 (96.57%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60
           MSALSRGLISR R+LSINSGASHS+TSSS SSSSRTNASCYYFFRAFSTQDLTQASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           PASSIIEAKP TMSSNS RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFV 180
           EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKL+EFPVSQDALLPVGTEIGARHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTG SRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTY 300
           GRMGGKQRTVKNVWIYKID ARNLIWVKGPIPGAEGSFVFIKDAM+K+LNKSAILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FATDGEDTDKLEPLVADLGEV 322
           FATDGEDTDKLEPLVADLGEV
Sbjct: 301 FATDGEDTDKLEPLVADLGEV 321

[Close]

BLAST of PI0009309 vs. ExPASy TrEMBL
Match: A0A6J1CAF7 (50S ribosomal protein L3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009440 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 6.5e-153
Identity = 277/328 (84.45%), Postives = 299/328 (91.16%), Query Frame = 0


Query: 1   MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60
           MSALSRGL+SRFR+LSINSGAS +I+     SSSRT+ SCYYFFR+FS++DL QA D S 
Sbjct: 1   MSALSRGLVSRFRLLSINSGASSTIS----PSSSRTHPSCYYFFRSFSSEDLIQAGDVSS 60

Query: 61  PASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           P+S IIEAKP  M+ NS RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFV 180
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKLREFPVS DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFV 180

Query: 181 PGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTG +RGKGFQGVMKRHGFKGMPASHGASLSHRS GSTGQRDAPGKVFKG+KM 
Sbjct: 181 PGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMP 240

Query: 241 GRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTY 300
           GRMGGKQRTVKNVW+YKID ARNLIWVKG +PGAEG+FVFIKDA +KK +KS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKS-ILPFPTY 300

Query: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 329
           FAT+ ED++KLEPLVADLGEVDPFM+GD
Sbjct: 301 FATEDEDSEKLEPLVADLGEVDPFMVGD 323

[Close]

BLAST of PI0009309 vs. NCBI nr
Match: XP_008438999.1 (PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Cucumis melo] >ADN34039.1 50S ribosomal protein l3 [Cucumis melo subsp. melo])

HSP 1 Score: 629.8 bits (1623), Expect = 1.3e-176
Identity = 317/328 (96.65%), Postives = 322/328 (98.17%), Query Frame = 0


Query: 1   MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60
           MSALSRGLISR R+LSINSGASHS+TSSS SSSSRTNASCYYFFRAFSTQDLTQASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           PASSIIEAKP TMSSNS RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFV 180
           EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKL+EFPVSQDALLPVGTEIGARHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTG SRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTY 300
           GRMGGKQRTVKNVWIYKID ARNLIWVKGPIPGAEGSFVFIKDAM+K+LNKSAILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 329
           FATDGEDTDKLEPLVADLGEVDPFMIGD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 328

[Close]

BLAST of PI0009309 vs. NCBI nr
Match: XP_004147630.1 (50S ribosomal protein L3-2, mitochondrial [Cucumis sativus] >KGN57206.1 hypothetical protein Csa_010606 [Cucumis sativus])

HSP 1 Score: 620.9 bits (1600), Expect = 6.2e-174
Identity = 312/328 (95.12%), Postives = 318/328 (96.95%), Query Frame = 0


Query: 1   MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60
           MSALSRGLISRFR+LSINS ASHSIT+SS SSSSRTNASCYYFFRAFSTQDLTQASDGSL
Sbjct: 1   MSALSRGLISRFRLLSINSSASHSITTSSSSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
            ASSI EAKP TM SNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  SASSIFEAKPGTMGSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFV 180
           EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGVRHFV 180

Query: 181 PGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTG SRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTY 300
           GRMGGKQRTVKNVWIYKID ARNL+WVKGPIPGAEG+FVFIKDA++KKLNKSAILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLMWVKGPIPGAEGNFVFIKDAVYKKLNKSAILPFPTY 300

Query: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 329
           FATDGEDTDKLEPLVADLGEVDPFM GD
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFMTGD 328

[Close]

BLAST of PI0009309 vs. NCBI nr
Match: KAA0052153.1 (50S ribosomal protein L3-2 [Cucumis melo var. makuwa] >TYK05118.1 50S ribosomal protein L3-2 [Cucumis melo var. makuwa])

HSP 1 Score: 614.0 bits (1582), Expect = 7.5e-172
Identity = 310/321 (96.57%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60
           MSALSRGLISR R+LSINSGASHS+TSSS SSSSRTNASCYYFFRAFSTQDLTQASDGSL
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           PASSIIEAKP TMSSNS RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFV 180
           EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKL+EFPVSQDALLPVGTEIGARHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTG SRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTY 300
           GRMGGKQRTVKNVWIYKID ARNLIWVKGPIPGAEGSFVFIKDAM+K+LNKSAILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FATDGEDTDKLEPLVADLGEV 322
           FATDGEDTDKLEPLVADLGEV
Sbjct: 301 FATDGEDTDKLEPLVADLGEV 321

[Close]

BLAST of PI0009309 vs. NCBI nr
Match: XP_038881747.1 (50S ribosomal protein L3-2, mitochondrial [Benincasa hispida])

HSP 1 Score: 585.1 bits (1507), Expect = 3.7e-163
Identity = 295/328 (89.94%), Postives = 309/328 (94.21%), Query Frame = 0


Query: 1   MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60
           MSALSRGLISRFR+LSINSGASH+ITS   SSSSRTNASCYYFFRAFSTQDL QASDGSL
Sbjct: 1   MSALSRGLISRFRLLSINSGASHTITS---SSSSRTNASCYYFFRAFSTQDLIQASDGSL 60

Query: 61  PASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           P+SSIIEAKPR M+ NS RTGVIAVKCGM+ALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PSSSIIEAKPRVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFV 180
           EGITALQIGCGQKK KHL+KPE+GHFRAQGVPLKRKLREFPVS+DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVSEDALLPVGTAIGVRHFV 180

Query: 181 PGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTG SRGKGFQGVMKRH FKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHNFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTY 300
           GRMGGKQRTVKNVWIYKID ARNLIWV+G +PGAEG+FVFIKDA +KKLNKS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVRGQVPGAEGNFVFIKDAFYKKLNKS-ILPFPTY 300

Query: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 329
           FATD ED + LEPLVADLGEVDPFM+GD
Sbjct: 301 FATDDEDMENLEPLVADLGEVDPFMVGD 324

[Close]

BLAST of PI0009309 vs. NCBI nr
Match: XP_022138212.1 (50S ribosomal protein L3-2, chloroplastic [Momordica charantia])

HSP 1 Score: 550.1 bits (1416), Expect = 1.3e-152
Identity = 277/328 (84.45%), Postives = 299/328 (91.16%), Query Frame = 0


Query: 1   MSALSRGLISRFRILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60
           MSALSRGL+SRFR+LSINSGAS +I+     SSSRT+ SCYYFFR+FS++DL QA D S 
Sbjct: 1   MSALSRGLVSRFRLLSINSGASSTIS----PSSSRTHPSCYYFFRSFSSEDLIQAGDVSS 60

Query: 61  PASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           P+S IIEAKP  M+ NS RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGARHFV 180
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKLREFPVS DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFV 180

Query: 181 PGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240
           PGQYVDVTG +RGKGFQGVMKRHGFKGMPASHGASLSHRS GSTGQRDAPGKVFKG+KM 
Sbjct: 181 PGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMP 240

Query: 241 GRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILPFPTY 300
           GRMGGKQRTVKNVW+YKID ARNLIWVKG +PGAEG+FVFIKDA +KK +KS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKS-ILPFPTY 300

Query: 301 FATDGEDTDKLEPLVADLGEVDPFMIGD 329
           FAT+ ED++KLEPLVADLGEVDPFM+GD
Sbjct: 301 FATEDEDSEKLEPLVADLGEVDPFMVGD 323

[Close]

BLAST of PI0009309 vs. TAIR 10
Match: AT3G17465.1 (ribosomal protein L3 plastid )

HSP 1 Score: 447.6 bits (1150), Expect = 8.7e-126
Identity = 236/332 (71.08%), Postives = 265/332 (79.82%), Query Frame = 0


Query: 1   MSALSRGLISRF-RILSINSGASHSITSSSPSSSSRTNASCYYFFRAFSTQDLTQASDGS 60
           M+A+ RGL+SR  + LSI      SIT S  SS S  + S ++  R FS+        GS
Sbjct: 1   MAAVPRGLLSRINQFLSI-----RSITPS--SSESLPHCSSFFLIRRFSSDTGLMDGGGS 60

Query: 61  ---LPASSIIEAKPRTMSSNSTRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVK 120
                 + IIEAK   MSS S RTG+IAVKCGM+ALWDKWG RIPI++LWVDDNIVSQVK
Sbjct: 61  DIIGAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVK 120

Query: 121 TIEKEGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLREFPVSQDALLPVGTEIGA 180
           T+EKEGI ALQIGCGQKK KHLSK  +GHFRAQGVPLKRKLREFPV++DALLPVGT +G 
Sbjct: 121 TVEKEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGV 180

Query: 181 RHFVPGQYVDVTGTSRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKG 240
           RHFVPGQYVDVTG +RGKGFQG MKRHGF GMPASHGASLSHRSGGSTGQRDAPGKVFKG
Sbjct: 181 RHFVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKG 240

Query: 241 RKMAGRMGGKQRTVKNVWIYKIDAARNLIWVKGPIPGAEGSFVFIKDAMHKKLNKSAILP 300
           RKMAGRMG  QRTVKNVW+YKID ARNL+WV+G +PGAEG+FVFIKDA  KK + S  LP
Sbjct: 241 RKMAGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISK-LP 300

Query: 301 FPTYFATDGEDTDKLEPLVADLGEVDPFMIGD 329
           FPTY A + ED  +LEPLVADLGEVDPFM+ +
Sbjct: 301 FPTYLAPEDEDPSELEPLVADLGEVDPFMLAE 324

[Close]

BLAST of PI0009309 vs. TAIR 10
Match: AT2G43030.1 (Ribosomal protein L3 family protein )

HSP 1 Score: 149.4 bits (376), Expect = 4.9e-36
Identity = 99/266 (37.22%), Postives = 148/266 (55.64%), Query Frame = 0


Query: 28  SSPSSSSRTNASCYYFFRAFSTQDLTQASDGSLPASS---IIEAKPRT----MSSNSTRT 87
           S PS  ++T  S   F   F            LPA S   +I++ P+T     SS     
Sbjct: 9   SFPSLLNKTTLSSSLFTPTF------------LPAKSSSLLIKSSPKTRFVVSSSMEAGI 68

Query: 88  GVIAVKCGMSALWDKWGARIPITVL-WVDDNIVSQVKTIEKEGITALQIGCGQKKEKHLS 147
           GV+  K GM + +++ G  +P+TV+ + + NIV+Q+KT+  +G  A+QIG  + ++K L+
Sbjct: 69  GVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLT 128

Query: 148 KPELGHFRAQGVPLKRKLREFPVSQ-DALLPVGTEIGARHFVPGQYVDVTGTSRGKGFQG 207
           KPE GH +  G    R L+EF ++  +   P    +    F  G  VDV GT+ GKGFQG
Sbjct: 129 KPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQG 188

Query: 208 VMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYKI 267
            +KRH FK    +HG S SHR+ GS G    PG+V+KG+KM GRMGG +  ++ + I K+
Sbjct: 189 GIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKV 248

Query: 268 DAARNLIWVKGPIPGAEGSFVFIKDA 285
           D   N++ +KG +PG  G+ + I  A
Sbjct: 249 DKELNVVMIKGALPGKPGNLLRITPA 261

The following BLAST results are available for this feature:

BLAST of PI0009309 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRN8	1.2e-124	71.08	50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL...	[more]
Q2G8Y0	2.4e-59	50.91	50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain ATCC 700278 ...	[more]
Q5LLU6	1.5e-58	54.09	50S ribosomal protein L3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / ...	[more]
Q5FTY3	3.4e-58	53.13	50S ribosomal protein L3 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpl...	[more]
Q2W2J1	1.3e-57	52.27	50S ribosomal protein L3 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700...	[more]

BLAST of PI0009309 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GC40	6.4e-177	96.65	50S ribosomal protein l3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3AYD1	6.4e-177	96.65	50S ribosomal protein L3-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10348392...	[more]
A0A0A0LAV0	3.0e-174	95.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171140 PE=3 SV=1	[more]
A0A5A7U8A2	3.6e-172	96.57	50S ribosomal protein L3-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A6J1CAF7	6.5e-153	84.45	50S ribosomal protein L3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of PI0009309 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438999.1	1.3e-176	96.65	PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Cucumis melo] >ADN34039.1 ...	[more]
XP_004147630.1	6.2e-174	95.12	50S ribosomal protein L3-2, mitochondrial [Cucumis sativus] >KGN57206.1 hypothet...	[more]
KAA0052153.1	7.5e-172	96.57	50S ribosomal protein L3-2 [Cucumis melo var. makuwa] >TYK05118.1 50S ribosomal ...	[more]
XP_038881747.1	3.7e-163	89.94	50S ribosomal protein L3-2, mitochondrial [Benincasa hispida]	[more]
XP_022138212.1	1.3e-152	84.45	50S ribosomal protein L3-2, chloroplastic [Momordica charantia]	[more]

BLAST of PI0009309 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17465.1	8.7e-126	71.08	ribosomal protein L3 plastid	[more]
AT2G43030.1	4.9e-36	37.22	Ribosomal protein L3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 202..288 e-value: 7.6E-25 score: 89.2
None	No IPR available	GENE3D	3.30.160.810		coord: 111..174 e-value: 1.5E-23 score: 85.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..232
None	No IPR available	PANTHER	PTHR11229:SF15	BNAA01G27990D PROTEIN	coord: 1..327
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 176..260 e-value: 4.9E-17 score: 62.0
IPR019927	Ribosomal protein L3, bacterial/organelle-type	TIGRFAM	TIGR03625	TIGR03625	coord: 81..282 e-value: 5.0E-77 score: 256.3
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 1..327
IPR019927	Ribosomal protein L3, bacterial/organelle-type	HAMAP	MF_01325_B	Ribosomal_L3_B	coord: 79..285 score: 34.120228
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 179..202
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 71..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009309.1	PI0009309.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome