PI0009176 (gene) Melon (PI 482460) v1

Overview


Name	PI0009176
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr11: 6416765 .. 6417534 (-)
RNA-Seq Expression	PI0009176
Synteny	PI0009176

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTCACCAACTTTTATTATCTTCAAATGCTTTCGTCTCATCCACGAATCTACAATCTTACATGCCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCATGGTCAATCTCGACCATCGTCATCGTATGCATCGTCTTCCTACTGTTGAGCAACTATAGACTTTTGAAACAATTGTGCCGTGTCCTTCATGGACTGATTTCCGGTCGACCTACGGTCCAATTTGAGGAAAACCCTAACAATCCTTCACTACAAATCCATGGCCATGGACTGGAGACCTCGATGATTCGTCTGCTACCTATATCACAGTTCAAAAAGAATGAAGAATCCGAATCAACGACAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGCGAATTCGAAGAAGGGGAATTGATTAAACACTTACCGAATTGTAATCATTCGTTTCATAGTTCTTGTATCGATGCCTGGTTCCGTGATCATTCGAGGTGCCCTCTCTGCAGATTGCAAGTCTTGAGTTTCTCTACTCCTGATTCTTCTTCAGCAATGCTGGAAACGCTTGGAAGAGAAAATGTTCTACGAGAAAGAGTAGCGCATTATCAAACACTCCGTGCTCAAATTCTGCAGCACCCTGAATTCAGAAGAGATGCATCGATTCAAGGATAACCGATGAACAAATCAATCGACGGAAAGCGAAATTTGCGATGAAACCGAGATATCGGCGATTTTTCTTTCAAGTATTTATTCATCTACTAATGCATCGATGATCAG

mRNA sequence

CCCTTCACCAACTTTTATTATCTTCAAATGCTTTCGTCTCATCCACGAATCTACAATCTTACATGCCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCATGGTCAATCTCGACCATCGTCATCGTATGCATCGTCTTCCTACTGTTGAGCAACTATAGACTTTTGAAACAATTGTGCCGTGTCCTTCATGGACTGATTTCCGGTCGACCTACGGTCCAATTTGAGGAAAACCCTAACAATCCTTCACTACAAATCCATGGCCATGGACTGGAGACCTCGATGATTCGTCTGCTACCTATATCACAGTTCAAAAAGAATGAAGAATCCGAATCAACGACAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGCGAATTCGAAGAAGGGGAATTGATTAAACACTTACCGAATTGTAATCATTCGTTTCATAGTTCTTGTATCGATGCCTGGTTCCGTGATCATTCGAGGTGCCCTCTCTGCAGATTGCAAGTCTTGAGTTTCTCTACTCCTGATTCTTCTTCAGCAATGCTGGAAACGCTTGGAAGAGAAAATGTTCTACGAGAAAGAGTAGCGCATTATCAAACACTCCGTGCTCAAATTCTGCAGCACCCTGAATTCAGAAGAGATGCATCGATTCAAGGATAACCGATGAACAAATCAATCGACGGAAAGCGAAATTTGCGATGAAACCGAGATATCGGCGATTTTTCTTTCAAGTATTTATTCATCTACTAATGCATCGATGATCAG

Coding sequence (CDS)

ATGCCATCGAGTCCGCCGCCGCCATCTCCGGTGCCTGATTACTCTAGCTGGAGTCCATGGTCAATCTCGACCATCGTCATCGTATGCATCGTCTTCCTACTGTTGAGCAACTATAGACTTTTGAAACAATTGTGCCGTGTCCTTCATGGACTGATTTCCGGTCGACCTACGGTCCAATTTGAGGAAAACCCTAACAATCCTTCACTACAAATCCATGGCCATGGACTGGAGACCTCGATGATTCGTCTGCTACCTATATCACAGTTCAAAAAGAATGAAGAATCCGAATCAACGACAAGTTTCAATACGGAATGCGCTGTTTGTTTGGGCGAATTCGAAGAAGGGGAATTGATTAAACACTTACCGAATTGTAATCATTCGTTTCATAGTTCTTGTATCGATGCCTGGTTCCGTGATCATTCGAGGTGCCCTCTCTGCAGATTGCAAGTCTTGAGTTTCTCTACTCCTGATTCTTCTTCAGCAATGCTGGAAACGCTTGGAAGAGAAAATGTTCTACGAGAAAGAGTAGCGCATTATCAAACACTCCGTGCTCAAATTCTGCAGCACCCTGAATTCAGAAGAGATGCATCGATTCAAGGATAA

Protein sequence

MPSSPPPPSPVPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTVQFEENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPDSSSAMLETLGRENVLRERVAHYQTLRAQILQHPEFRRDASIQG

Homology

[Close]

BLAST of PI0009176 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.9e-20
Identity = 59/166 (35.54%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTV 64
           PPPPS   D       SS+SP  I+ I I+    +L+S Y L+ + C   H   S   T+
Sbjct: 36  PPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCH-RHHQTSSSETL 95

Query: 65  QFEEN-----PNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFE 124
               N      +   +  +G GL  SMI+ + + ++K  +         ++C+VCL EFE
Sbjct: 96  NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD----GSDCSVCLSEFE 155

Query: 125 EGELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPDSS 160
           E E ++ LP CNH+FH  CID W + HS CPLCR  V   + P +S
Sbjct: 156 ENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTAS 196

[Close]

BLAST of PI0009176 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-18
Identity = 66/195 (33.85%), Postives = 101/195 (51.79%), Query Frame = 0


Query: 5   PPPPSPV-----PDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGL-ISGRPTV 64
           PPPP P+        +S+   +++ I I+   FLL+S Y  + + C   H + I GR ++
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 65  -QFEENPNNP----SLQIHGHGLETSMIRLLPISQFKK----------NEESESTTSFNT 124
            +   N  +P    S ++   GL+ S+IR +PI +FKK           E  E     + 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 125 ECAVCLGEFEEGELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQV---LSF-----ST 171
           EC+VCL EF++ E ++ +PNC+H FH  CID W ++++ CPLCR +V    SF     S 
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196

[Close]

BLAST of PI0009176 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 1.0e-17
Identity = 64/191 (33.51%), Postives = 96/191 (50.26%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVIVCIVFLLLSNYRLLKQLC-RVLH-------- 64
           PPPPS   D       S +SP  I+ I I+   F+L+S Y L+ + C R  H        
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 65  --GLISGRPTVQFEENPN-----NPSLQI---HGHGLETSMIRLLPISQFKKNEESESTT 124
               IS   T Q   N N     NP+  I    G GL+ S+I+ + + +++K +      
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-- 157

Query: 125 SFNTECAVCLGEFEEGELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPDSS 171
             +++C+VCL EF+E E ++ LP CNH+FH  CID W + HS CPLCR  +++ S  +  
Sbjct: 158 --SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIV 217

[Close]

BLAST of PI0009176 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.8e-17
Identity = 65/197 (32.99%), Postives = 88/197 (44.67%), Query Frame = 0


Query: 2   PSSPPPPSPVPDYSSWSPWSISTI-VIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTVQF 61
           P  PPPP P  + S   P SI  +  I+  +FL+   Y  + Q  R+    ++   T Q 
Sbjct: 26  PPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQ 85

Query: 62  EENPNNPS---------LQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGE 121
           E+                QI   GL  S I  + +  FKK E         TEC+VCL E
Sbjct: 86  EDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIID----GTECSVCLNE 145

Query: 122 FEEGELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTP----------DSSSA 179
           FEE E ++ LP C+H+FH +CID W   H  CPLCR  VL  + P            S +
Sbjct: 146 FEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQETETNHQPDSES 205

[Close]

BLAST of PI0009176 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 4.0e-17
Identity = 54/171 (31.58%), Postives = 83/171 (48.54%), Query Frame = 0


Query: 5   PPPPSPVPDYSS-------WSPWSISTIVIVCIVFLLLSNYRLLKQLCRV---LHGLISG 64
           PPPP  V   S+       +SP  I+ I ++   FLL+S Y  + + C     L G + G
Sbjct: 36  PPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFG 95

Query: 65  RPTVQFEENPNNPSLQIHGH---------------GLETSMIRLLPISQFKKNEESESTT 124
             +          S   HGH               GL+ ++I  + + ++++ +    T 
Sbjct: 96  SSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKYRRGDGFVHT- 155

Query: 125 SFNTECAVCLGEFEEGELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQV 151
              T+C+VCLGEF +GE ++ LP C+H+FH  CID W + HS CPLCR  +
Sbjct: 156 ---TDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANI 202

[Close]

BLAST of PI0009176 vs. ExPASy TrEMBL
Match: A0A0A0KCA5 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G303210 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 7.3e-107
Identity = 194/201 (96.52%), Postives = 197/201 (98.01%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIV+VCIVFLLLSNYRLLKQLCRVLHGL +GRPTVQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60

Query: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120
           EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH
Sbjct: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120

Query: 121 LPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPD-SSSAMLETLGRENVLRERVAHY 180
           LPNCNHSFHS CIDAWFR+HS CPLCRLQVLSFSTPD SSSAMLETLGRENVLRERVAHY
Sbjct: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSSAMLETLGRENVLRERVAHY 180

Query: 181 QTLRAQILQHPEFRRDASIQG 201
           QTLRAQILQHPEFRRDASIQG
Sbjct: 181 QTLRAQILQHPEFRRDASIQG 201

[Close]

BLAST of PI0009176 vs. ExPASy TrEMBL
Match: A0A5A7V3S2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00390 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 188/200 (94.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIVIVC++FLLLSNYRLLKQLCRVLH L SGRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120
           EENPNNPSLQIH HGLETSMIRLLPISQFKK EESESTTSFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPDSSSAMLETLGRENVLRERVAHYQ 180
           LPNCNHSFHSSCIDAWFRDHS CPLCRLQV SFSTPDSSSAMLETLGREN+LRERVAHYQ
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TLRAQILQHPEFRRDASIQG 201
           TLRAQILQHPEFRRD SIQG
Sbjct: 181 TLRAQILQHPEFRRDESIQG 200

[Close]

BLAST of PI0009176 vs. ExPASy TrEMBL
Match: A0A1S3BIX6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103490579 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.5e-104
Identity = 188/200 (94.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIVIVC++FLLLSNYRLLKQLCRVLH L SGRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120
           EENPNNPSLQIH HGLETSMIRLLPISQFKK EESESTTSFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPDSSSAMLETLGRENVLRERVAHYQ 180
           LPNCNHSFHSSCIDAWFRDHS CPLCRLQV SFSTPDSSSAMLETLGREN+LRERVAHYQ
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TLRAQILQHPEFRRDASIQG 201
           TLRAQILQHPEFRRD SIQG
Sbjct: 181 TLRAQILQHPEFRRDESIQG 200

[Close]

BLAST of PI0009176 vs. ExPASy TrEMBL
Match: A0A6A6KKG1 (RING-type E3 ubiquitin transferase OS=Hevea brasiliensis OX=3981 GN=GH714_013318 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.5e-40
Identity = 100/198 (50.51%), Postives = 126/198 (63.64%), Query Frame = 0


Query: 1   MPSSPPPPS--PVPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTV 60
           MP SP P +   + +   W+P+ I  +V VC   ++ S YR+LK+LC  L+ L   R   
Sbjct: 1   MPLSPTPAAQHQLENSPEWNPYVIGPVVAVCTFIVMFSYYRILKRLCCSLNTLTFSRNRF 60

Query: 61  QF----EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEE 120
           Q     E +  + SLQ   HGLE++++  LPISQFKK +E ES TS N+ECAVCLGEFEE
Sbjct: 61  QMRRIGENSLGDSSLQYFSHGLESAIMCSLPISQFKKEKEEESRTS-NSECAVCLGEFEE 120

Query: 121 GELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQV--LSFSTPDSSSAMLETLGRENVL 180
           GE +KHLP C H FH +CID WF+ HS CPLCR QV  LS     S S +LETL RE+ L
Sbjct: 121 GEWLKHLPICAHVFHVACIDTWFQTHSNCPLCRSQVYDLSHEYSISVSILLETLRREDFL 180

Query: 181 RERVAHYQTLRAQILQHP 191
            ER  HYQ LR +IL +P
Sbjct: 181 HERAKHYQILRPEILGNP 197

[Close]

BLAST of PI0009176 vs. ExPASy TrEMBL
Match: A0A2C9W1B6 (RING-type E3 ubiquitin transferase OS=Manihot esculenta OX=3983 GN=MANES_04G030200 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 3.4e-40
Identity = 95/197 (48.22%), Postives = 125/197 (63.45%), Query Frame = 0


Query: 1   MPSSPPPPSP--VPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTV 60
           MP SP P +P  + +YS W+ + I  ++ VC   +L S YR+L++LC  L+     R   
Sbjct: 1   MPPSPTPEAPLRLENYSQWNAYVIGPVIAVCSSVVLFSYYRMLRRLCCTLNTQTLPRNRA 60

Query: 61  QF----EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEE 120
           Q     + N  + SLQ + HGLE++++R LPISQFKK EESE++   N ECAVCLGEFEE
Sbjct: 61  QMSRINQNNLEDSSLQNYSHGLESNIMRSLPISQFKKEEESEAS---NRECAVCLGEFEE 120

Query: 121 GELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQV--LSFSTPDSSSAMLETLGRENVL 180
           GE +KHLPNC H FH +CID WF+ HS CPLCR  V  L      S   +L TL RE+  
Sbjct: 121 GEWLKHLPNCAHVFHVACIDTWFQTHSNCPLCRSHVYDLCHEYSISMDTLLHTLRREDFF 180

Query: 181 RERVAHYQTLRAQILQH 190
            ER  HYQ LR++IL++
Sbjct: 181 NERAEHYQNLRSEILRN 194

[Close]

BLAST of PI0009176 vs. NCBI nr
Match: XP_031743630.1 (RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN47355.1 hypothetical protein Csa_023057 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 1.5e-106
Identity = 194/201 (96.52%), Postives = 197/201 (98.01%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIV+VCIVFLLLSNYRLLKQLCRVLHGL +GRPTVQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60

Query: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120
           EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH
Sbjct: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120

Query: 121 LPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPD-SSSAMLETLGRENVLRERVAHY 180
           LPNCNHSFHS CIDAWFR+HS CPLCRLQVLSFSTPD SSSAMLETLGRENVLRERVAHY
Sbjct: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFSTPDSSSSAMLETLGRENVLRERVAHY 180

Query: 181 QTLRAQILQHPEFRRDASIQG 201
           QTLRAQILQHPEFRRDASIQG
Sbjct: 181 QTLRAQILQHPEFRRDASIQG 201

[Close]

BLAST of PI0009176 vs. NCBI nr
Match: XP_008448367.1 (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >KAA0061954.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa] >TYK23976.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 388.7 bits (997), Expect = 3.1e-104
Identity = 188/200 (94.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTVQF 60
           MPSSPPPPSPVPDYSSWSPWSISTIVIVC++FLLLSNYRLLKQLCRVLH L SGRP VQF
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120
           EENPNNPSLQIH HGLETSMIRLLPISQFKK EESESTTSFNTECAVCLGEFEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPDSSSAMLETLGRENVLRERVAHYQ 180
           LPNCNHSFHSSCIDAWFRDHS CPLCRLQV SFSTPDSSSAMLETLGREN+LRERVAHYQ
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFSTPDSSSAMLETLGRENILRERVAHYQ 180

Query: 181 TLRAQILQHPEFRRDASIQG 201
           TLRAQILQHPEFRRD SIQG
Sbjct: 181 TLRAQILQHPEFRRDESIQG 200

[Close]

BLAST of PI0009176 vs. NCBI nr
Match: KAG6570731.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010575.1 RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327.4 bits (838), Expect = 8.6e-86
Identity = 164/207 (79.23%), Postives = 179/207 (86.47%), Query Frame = 0


Query: 1   MPSS---PPPPSPVPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPT 60
           MPSS   PPPPSPVPDYSSWSPWSIS I IVCIV LLLSNYR+LK+ CRVLHGL  GR  
Sbjct: 1   MPSSPPPPPPPSPVPDYSSWSPWSISIIAIVCIVVLLLSNYRILKRWCRVLHGLFCGRFV 60

Query: 61  VQFEENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGEL 120
           VQF+ENPN+PS ++H HGLE S IRLLPISQFKKNEE+EST S NTECAVCLGEFEEGEL
Sbjct: 61  VQFDENPNDPSPEVHVHGLEASTIRLLPISQFKKNEEAESTASINTECAVCLGEFEEGEL 120

Query: 121 IKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFS----TPDSSSAMLETLGRENVLR 180
           IK+LPNCNHSFHSSCIDAW R+HS CPLCRL V + S    TPDSSSAMLETLGRE+V R
Sbjct: 121 IKNLPNCNHSFHSSCIDAWLRNHSSCPLCRLHVSNLSIDCPTPDSSSAMLETLGREDVER 180

Query: 181 ERVAHYQTLRAQILQHPEFRRDASIQG 201
           ERV++YQTLRAQILQ+PE RRDAS+QG
Sbjct: 181 ERVSYYQTLRAQILQNPELRRDASVQG 207

[Close]

BLAST of PI0009176 vs. NCBI nr
Match: XP_023512261.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.6 bits (823), Expect = 4.7e-84
Identity = 161/207 (77.78%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 1   MPSS---PPPPSPVPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPT 60
           MPSS   PPPPSPVPDYSSWSPWSIS I IVCIV LLLSNYR+LK+ CRV HGL  GR  
Sbjct: 1   MPSSPPPPPPPSPVPDYSSWSPWSISIIAIVCIVVLLLSNYRILKRWCRVFHGLFCGRSV 60

Query: 61  VQFEENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGEL 120
           VQF+ENPN+PS Q+H HGLE S IRLLPISQFKKNEE+EST S NTECAVCLGEFEEGEL
Sbjct: 61  VQFDENPNDPSPQVHVHGLEASTIRLLPISQFKKNEEAESTASINTECAVCLGEFEEGEL 120

Query: 121 IKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFS----TPDSSSAMLETLGRENVLR 180
           IK+LPNCNHSFHSSCIDAW R+HS CPLCRL V + S    TPDSSSAMLETL RE+V  
Sbjct: 121 IKNLPNCNHSFHSSCIDAWLRNHSSCPLCRLHVSNLSIDCPTPDSSSAMLETLSREDVDG 180

Query: 181 ERVAHYQTLRAQILQHPEFRRDASIQG 201
           ERV++YQTLRAQILQ+P+ RRDAS+QG
Sbjct: 181 ERVSYYQTLRAQILQNPDLRRDASVQG 207

[Close]

BLAST of PI0009176 vs. NCBI nr
Match: XP_031247518.1 (RING-H2 finger protein ATL16-like [Pistacia vera])

HSP 1 Score: 179.5 bits (454), Expect = 2.9e-41
Identity = 95/197 (48.22%), Postives = 118/197 (59.90%), Query Frame = 0


Query: 3   SSPPPPSPVPDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTVQ--- 62
           SS P P+P+    SW+P  +S + + C +FLL S Y  LK+LC       + R   Q   
Sbjct: 2   SSSPSPAPIYKPPSWNPLVVSLVALTCTIFLLFSYYNYLKKLCCCAFNRGNSRNPDQRQL 61

Query: 63  -FEENPNNPSLQIHGHGLETSMIRLLPISQFKKN---EESESTTSFNTECAVCLGEFEEG 122
             E N ++PSLQ + HGLE+S+I  LPI+QFKKN   EE E     N+EC VCLGEFEEG
Sbjct: 62  LNEANFDDPSLQFNSHGLESSIIHSLPITQFKKNINKEEEEELQPRNSECGVCLGEFEEG 121

Query: 123 ELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPDSSS----AMLETLGRENV 182
           E +KHLPNC+H+FH  CID WF  HS CPLCR Q    + P   S     +LE L RE+ 
Sbjct: 122 EWLKHLPNCSHAFHIPCIDTWFHSHSNCPLCRSQAFDLTIPHECSVSMYTLLENLRREDF 181

Query: 183 LRERVAHYQTLRAQILQ 189
             ER  HYQ LR  +LQ
Sbjct: 182 FHERATHYQILRTAVLQ 198

[Close]

BLAST of PI0009176 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.1e-21
Identity = 59/166 (35.54%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTV 64
           PPPPS   D       SS+SP  I+ I I+    +L+S Y L+ + C   H   S   T+
Sbjct: 36  PPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCH-RHHQTSSSETL 95

Query: 65  QFEEN-----PNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFE 124
               N      +   +  +G GL  SMI+ + + ++K  +         ++C+VCL EFE
Sbjct: 96  NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSGDGFVD----GSDCSVCLSEFE 155

Query: 125 EGELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPDSS 160
           E E ++ LP CNH+FH  CID W + HS CPLCR  V   + P +S
Sbjct: 156 ENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTGVNNPTAS 196

[Close]

BLAST of PI0009176 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19
Identity = 66/195 (33.85%), Postives = 101/195 (51.79%), Query Frame = 0


Query: 5   PPPPSPV-----PDYSSWSPWSISTIVIVCIVFLLLSNYRLLKQLCRVLHGL-ISGRPTV 64
           PPPP P+        +S+   +++ I I+   FLL+S Y  + + C   H + I GR ++
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 65  -QFEENPNNP----SLQIHGHGLETSMIRLLPISQFKK----------NEESESTTSFNT 124
            +   N  +P    S ++   GL+ S+IR +PI +FKK           E  E     + 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 125 ECAVCLGEFEEGELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQV---LSF-----ST 171
           EC+VCL EF++ E ++ +PNC+H FH  CID W ++++ CPLCR +V    SF     S 
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSA 196

[Close]

BLAST of PI0009176 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 7.4e-19
Identity = 64/191 (33.51%), Postives = 96/191 (50.26%), Query Frame = 0


Query: 5   PPPPSPVPD------YSSWSPWSISTIVIVCIVFLLLSNYRLLKQLC-RVLH-------- 64
           PPPPS   D       S +SP  I+ I I+   F+L+S Y L+ + C R  H        
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 65  --GLISGRPTVQFEENPN-----NPSLQI---HGHGLETSMIRLLPISQFKKNEESESTT 124
               IS   T Q   N N     NP+  I    G GL+ S+I+ + + +++K +      
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-- 157

Query: 125 SFNTECAVCLGEFEEGELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTPDSS 171
             +++C+VCL EF+E E ++ LP CNH+FH  CID W + HS CPLCR  +++ S  +  
Sbjct: 158 --SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIV 217

[Close]

BLAST of PI0009176 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 91.3 bits (225), Expect = 9.6e-19
Identity = 56/143 (39.16%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 26  VIVCIVFL-LLSNYRLLKQLCRVLHGLISGR--PTVQFEENPNNPSLQ-IHGHGLETSMI 85
           V++ +VFL L + + LL+   R L      R    V F  +P+  +   +   GL+ ++I
Sbjct: 41  VVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVASRGLDPNVI 100

Query: 86  RLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKHLPNCNHSFHSSCIDAWFRDHS 145
           + LP+  F     S+ T     ECAVCL EFEE E  + LPNC H+FH  CID WF  HS
Sbjct: 101 KSLPVFTF-----SDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHS 160

Query: 146 RCPLCRLQVLSFSTPDSSSAMLE 165
            CPLCR  V S +  +S++A  E
Sbjct: 161 TCPLCRSLVESLAGIESTAAARE 178

[Close]

BLAST of PI0009176 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18
Identity = 65/197 (32.99%), Postives = 88/197 (44.67%), Query Frame = 0


Query: 2   PSSPPPPSPVPDYSSWSPWSISTI-VIVCIVFLLLSNYRLLKQLCRVLHGLISGRPTVQF 61
           P  PPPP P  + S   P SI  +  I+  +FL+   Y  + Q  R+    ++   T Q 
Sbjct: 26  PPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQ 85

Query: 62  EENPNNPS---------LQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGE 121
           E+                QI   GL  S I  + +  FKK E         TEC+VCL E
Sbjct: 86  EDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIID----GTECSVCLNE 145

Query: 122 FEEGELIKHLPNCNHSFHSSCIDAWFRDHSRCPLCRLQVLSFSTP----------DSSSA 179
           FEE E ++ LP C+H+FH +CID W   H  CPLCR  VL  + P            S +
Sbjct: 146 FEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPPHQETETNHQPDSES 205

The following BLAST results are available for this feature:

BLAST of PI0009176 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF64	2.9e-20	35.54	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9LSW9	2.1e-18	33.85	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
Q9SRQ8	1.0e-17	33.51	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q9LX93	1.8e-17	32.99	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q7XLY8	4.0e-17	31.58	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]

BLAST of PI0009176 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCA5	7.3e-107	96.52	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G303210 PE...	[more]
A0A5A7V3S2	1.5e-104	94.00	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BIX6	1.5e-104	94.00	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103490579 PE=3 ...	[more]
A0A6A6KKG1	1.5e-40	50.51	RING-type E3 ubiquitin transferase OS=Hevea brasiliensis OX=3981 GN=GH714_013318...	[more]
A0A2C9W1B6	3.4e-40	48.22	RING-type E3 ubiquitin transferase OS=Manihot esculenta OX=3983 GN=MANES_04G0302...	[more]

BLAST of PI0009176 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743630.1	1.5e-106	96.52	RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN47355.1 hypothetical pro...	[more]
XP_008448367.1	3.1e-104	94.00	PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >KAA0061954.1 RING-H...	[more]
KAG6570731.1	8.6e-86	79.23	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_023512261.1	4.7e-84	77.78	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]	[more]
XP_031247518.1	2.9e-41	48.22	RING-H2 finger protein ATL16-like [Pistacia vera]	[more]

BLAST of PI0009176 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	2.1e-21	35.54	RING/U-box superfamily protein	[more]
AT5G43420.1	1.5e-19	33.85	RING/U-box superfamily protein	[more]
AT3G03550.1	7.4e-19	33.51	RING/U-box superfamily protein	[more]
AT3G16720.1	9.6e-19	39.16	TOXICOS EN LEVADURA 2	[more]
AT5G10380.1	1.3e-18	32.99	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 105..146 e-value: 1.6E-6 score: 37.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 104..147 e-value: 6.5E-13 score: 48.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 105..147 score: 12.518784
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 65..151 e-value: 6.8E-21 score: 75.7
None	No IPR available	PANTHER	PTHR45676:SF107	RING/U-BOX SUPERFAMILY PROTEIN	coord: 14..157
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 104..147 e-value: 6.73678E-16 score: 66.5565
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..152
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 14..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009176.1	PI0009176.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane