Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCACCCAACCTCTACAACTTTCAACCCAGGAATCGCCTACCCTGTATTCGGCGAAAACGCCAGGTTTGAAATCAAACATGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGAACATCCTAGGGAAGATCCACACGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACTTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAAAGGTGGGCAAATGCTCTAGAAGATGGCGAGGTGGGAACATGGGATCAACTAATAGAGAAATTTATGAAGAAATTTTTCCCACCTTACGAAAACGCTAGAAGAAGGAAAGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATGGAGGTTTTCTATTTCGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGCTTGTAGACGGTATGCTAAAGAGCACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAACAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGGTGATGATGGCATGGATAAAAGCGCCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTCAAATCAATGACAATATCGCAAGTCAACGTCGAAGGAAGCTCTGTGCACGCGGCTAACCAAATTGATGACATGAGATGCGTGGGATGCGGCGGTCATCCTAACACTGACGCATGCCCACTCAATACTGAAACCGTCGCATTCATAAGGAAGGACCCCTACTCCAATACTTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAACAAGGACGACATGGTGGTTAAGGTGACCATCGCGGGGAAGCATCTGCTCCCACACGAGGTACCAAAACAATAGACCCCAACACTCCCATCATCAACAGCAGCCCACCACCACCGCCTCATCCACCTCTCCCATGGAAAGTCTCCTCCGCGAATACATGCAGAAAAATGATCCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTCCCAATCAATACATAA
mRNA sequence
ATGCGGCACCCAACCTCTACAACTTTCAACCCAGGAATCGCCTACCCTGTATTCGGCGAAAACGCCAGGTTTGAAATCAAACATGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGAACATCCTAGGGAAGATCCACACGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACTTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAAAGGTGGGCAAATGCTCTAGAAGATGGCGAGGTGGGAACATGGGATCAACTAATAGAGAAATTTATGAAGAAATTTTTCCCACCTTACGAAAACGCTAGAAGAAGGAAAGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATGGAGGTTTTCTATTTCGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGCTTGTAGACGGTATGCTAAAGAGCACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAACAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGGTGATGATGGCATGGATAAAAGCGCCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTCAAATCAATGACAATATCGCAAGTCAACGTCGAAGGAAGCTCTGTGCACGCGGCTAACCAAATTGATGACATGAGATGCGTGGGATGCGGCGGTCATCCTAACACTGACGCATGCCCACTCAATACTGAAACCCAGCCCACCACCACCGCCTCATCCACCTCTCCCATGGAAAGTCTCCTCCGCGAATACATGCAGAAAAATGATCCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTCCCAATCAATACATAA
Coding sequence (CDS)
ATGCGGCACCCAACCTCTACAACTTTCAACCCAGGAATCGCCTACCCTGTATTCGGCGAAAACGCCAGGTTTGAAATCAAACATGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGAACATCCTAGGGAAGATCCACACGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACTTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAAAGGTGGGCAAATGCTCTAGAAGATGGCGAGGTGGGAACATGGGATCAACTAATAGAGAAATTTATGAAGAAATTTTTCCCACCTTACGAAAACGCTAGAAGAAGGAAAGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATGGAGGTTTTCTATTTCGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGCTTGTAGACGGTATGCTAAAGAGCACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAACAATGAAGAATGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGGTGATGATGGCATGGATAAAAGCGCCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTCAAATCAATGACAATATCGCAAGTCAACGTCGAAGGAAGCTCTGTGCACGCGGCTAACCAAATTGATGACATGAGATGCGTGGGATGCGGCGGTCATCCTAACACTGACGCATGCCCACTCAATACTGAAACCCAGCCCACCACCACCGCCTCATCCACCTCTCCCATGGAAAGTCTCCTCCGCGAATACATGCAGAAAAATGATCCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGGAAGACAGCAAGGATCCCTCCCAATCAATACATAA
Protein sequence
MRHPTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFHMPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNLLKSMTISQVNVEGSSVHAANQIDDMRCVGCGGHPNTDACPLNTETQPTTTASSTSPMESLLREYMQKNDPLLQSQASSIRNLEVQLGQLASDFSGRQQGSLPINT
Homology
BLAST of PI0009091 vs. ExPASy TrEMBL
Match:
U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1)
HSP 1 Score: 233.8 bits (595), Expect = 1.1e-57
Identity = 124/285 (43.51%), Postives = 168/285 (58.95%), Query Frame = 0
Query: 4 PTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFH 63
P NPGI P + +FE+K VM QM+Q GQF P EDPH H+RSF + SF
Sbjct: 29 PMFNELNPGIVRPEI-QAPQFELKPVMFQMLQTVGQFSGMPTEDPHLHLRSFLEVSDSFK 88
Query: 64 MPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKE 123
+ G+S E LR LFP +LRD A+ W N L V W+ L EKF++K+FPP NA+ R E
Sbjct: 89 IQGVSEEVLRLKLFPFSLRDRARSWLNTLPPDSVTNWNDLAEKFLRKYFPPTRNAKFRSE 148
Query: 124 LMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGM 183
+MSFQQ + E+ DAW RFK +++ CPH+GIP CI ME FY GLN A++ DA +
Sbjct: 149 IMSFQQLEDESTSDAWERFKELLRKCPHHGIPHCIQMETFYNGLNAASRMVLDASANGAI 208
Query: 184 LKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDG-MDKSAVVALQGQMTAMNNL 243
L +YN+ L+T+ASNN +W N R ++ G ++ A+ AL QM +M N+
Sbjct: 209 LSKSYNEAFEILETIASNNYQW-----SNTRAPTSRKVAGVLEVDAITALTAQMASMTNV 268
Query: 244 LKSMTISQVNVEGSSVHAANQIDDMRCVGCGGHPNTDACPLNTET 288
LK+++I N + AA Q DD+ CV CG + CP N E+
Sbjct: 269 LKNLSIG--NAKNIQPAAAIQSDDVSCVFCGEGHVFEKCPSNPES 305
BLAST of PI0009091 vs. ExPASy TrEMBL
Match:
A0A6J1G7Q6 (uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC111451598 PE=4 SV=1)
HSP 1 Score: 221.9 bits (564), Expect = 4.3e-54
Identity = 138/421 (32.78%), Postives = 201/421 (47.74%), Query Frame = 0
Query: 3 HPTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASF 62
HP NP I P + FE+K VM QM+Q GQF +DPH H++SF + SF
Sbjct: 27 HPAVEELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLSSKDPHLHLKSFLGVSDSF 86
Query: 63 HMPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRK 122
G+ + +R + F +LRD AK W N L G + +W+ L EKF+ K+FPP +AR R
Sbjct: 87 RFQGVDKDVIRLSFFSYSLRDGAKSWLNILALGIIDSWNSLAEKFLFKYFPPTRSARFRN 146
Query: 123 ELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDG 182
E+++FQ+ + E L +AW RFK ++ CPH+G+P CI +E FY GLN AT+Q DA
Sbjct: 147 EIVAFQKFENETLSEAWERFKETLRKCPHHGLPHCIQIETFYNGLNTATKQVVDASANGD 206
Query: 183 MLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNL 242
+L TYN+ L+ +ASNN +W + R K + ++ A+ ++ Q+ +M N+
Sbjct: 207 ILSKTYNEAYEILERIASNNCQWVD----VRSNPGKKTREVLEVDALSSINAQLASMTNI 266
Query: 243 LKSMTISQVNVEGSSVHAAN---QIDDMRCVGCGGHPNTDACPLNTET------------ 302
L+++ Q ++ + H A Q CV CG D CP N +
Sbjct: 267 LQNLAFGQGSMIKAPAHTATVMIQTATESCVYCGEKHTFDQCPSNPASIFYVGNQASQGN 326
Query: 303 -----------------------------------------------------QPTTTAS 348
Q TT
Sbjct: 327 PKTNPSSNTYNPGWRNHPNFLCKGQGSYNQQMPPKANYPPGFGLQNQLTYDSQQATTQGE 386
BLAST of PI0009091 vs. ExPASy TrEMBL
Match:
A0A5D3CC26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00270 PE=4 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 8.0e-53
Identity = 122/241 (50.62%), Postives = 159/241 (65.98%), Query Frame = 0
Query: 125 MSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGML 184
M+F+Q+DRENL D W RFKRM+K CPH+ IP+C+LME FYFGL+K T Q+A+ V GML
Sbjct: 1 MTFEQRDRENLIDVWKRFKRMIKRCPHHCIPECVLMEQFYFGLSKNTLQSANIVFTGGML 60
Query: 185 KSTYNQIKTTLDTMASNNEEWDEDDFGNR------RGGRAKGDDGMDKSAVVALQGQMTA 244
+S+YNQIK LDTMASN++EW ++ FG+R +G R + +DG+D S +VALQGQ+
Sbjct: 61 RSSYNQIKNMLDTMASNSQEWRDESFGSRNDSRGTKGNRGRIEDGIDMSIMVALQGQVIE 120
Query: 245 MNNLLKSMTISQVNVEGSSVHAANQIDDMRCVGCGGHPNTDACPLNTETQPTTTASSTSP 304
M N+L+SM + QVNV SSV Q+++M CVGC NT+ACPLNTE
Sbjct: 121 M-NILQSMALLQVNVVRSSVQMVQQVNEMGCVGCRAPHNTNACPLNTE------------ 180
Query: 305 MESLLREYMQKNDPL------------LQSQASSIRNLEVQLGQLASDFSGRQQGSLPIN 348
+ Y+ KNDP + SQASSI+N+E+QLGQL SDFS R + S P N
Sbjct: 181 ----IVAYL-KNDPTPIHIMWGGETTQISSQASSIKNMELQLGQLTSDFSRRPKRSFPSN 223
BLAST of PI0009091 vs. ExPASy TrEMBL
Match:
A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 8.0e-53
Identity = 134/401 (33.42%), Postives = 197/401 (49.13%), Query Frame = 0
Query: 3 HPTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASF 62
HP NP I P + FE+K VM QM+Q GQF P EDPH H++SF + SF
Sbjct: 57 HPAVEELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLPSEDPHLHLKSFLGVSDSF 116
Query: 63 HMPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRK 122
+ + +R +LFP +LRD AK W N L G + +W+ L+EKF+ K+FPP NAR R
Sbjct: 117 RFQRVDKDVIRLSLFPYSLRDGAKSWLNTLALGTIDSWNSLVEKFLIKYFPPTRNARFRN 176
Query: 123 ELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDG 182
E++ FQQ + + L +AW RFK M++ CPH+G+P CI ME FY GLN AT+Q DA
Sbjct: 177 EIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQMETFYNGLNIATKQVVDASANGA 236
Query: 183 MLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNL 242
+L TYN+ L+ +ASNN +W D + G + +G ++ A+ ++ Q+ ++ N+
Sbjct: 237 ILSKTYNEAYEILERIASNNCQW--ADVRSNPGRKTRG--VLEVDALSSINAQLASVTNI 296
Query: 243 LKSMTISQVNVEGSSVHAA---NQIDDMRCVGCGGHPNTDACP----------------- 302
L+++ + Q ++ + VH NQ CV CG D CP
Sbjct: 297 LQNLALGQDSMIKAPVHTVAVINQTAAESCVYCGEEHTFDQCPSNPASIFYVGNQASQGN 356
Query: 303 ------------------------------------------------------LNTETQ 328
+NT+ +
Sbjct: 357 PKNNPFSNTYNPGWRNHPNFSWKGQGSYNQQMPPKANYPPGFGLQNQLAYSSQQVNTQGK 416
BLAST of PI0009091 vs. ExPASy TrEMBL
Match:
A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 8.0e-53
Identity = 138/410 (33.66%), Postives = 199/410 (48.54%), Query Frame = 0
Query: 3 HPTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSI---- 62
HP NP I P + FE+K VM QM+Q GQF P EDPH H++SF +
Sbjct: 79 HPAVEELNPCIIRPEI-QGTTFELKPVMFQMLQTIGQFHGLPLEDPHLHLKSFLGVSDSF 138
Query: 63 ---CASFHMPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPY 122
SF G+ + +R +LFP LRD AK W N L G + +W+ L E F+ K+FPP
Sbjct: 139 RFHSDSFRFQGVDKDMIRLSLFPYLLRDGAKSWLNTLAPGTIDSWNSLAENFLIKYFPPT 198
Query: 123 ENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTA 182
NAR + E+++FQQ + E L +A RFK M++ CPH+G+P CI ME FY GLN T+Q
Sbjct: 199 RNARFKNEIVTFQQFEDETLSEACERFKEMLRKCPHHGLPHCIQMETFYNGLNIVTKQVV 258
Query: 183 DAVLVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQ 242
DA +L TYN+ L+ +ASNN +W D + G + +G ++ A+ ++ Q
Sbjct: 259 DASANGAILSKTYNEAYEILERIASNNCQW--ADVRSNPGRKTRG--VLEVDALSSINAQ 318
Query: 243 MTAMNNLLKSMTISQVNVEGSSVHAA---NQIDDMRCVGCGGHPNTDACP---------- 302
+ ++ N+L+++ + Q ++ + VH A NQ CV CG D CP
Sbjct: 319 LASVTNILQNLALGQDSMIKAPVHTAAAINQTAAESCVYCGEEHTFDQCPSNPASIFYVG 378
Query: 303 ------------------------------------------------------------ 330
Sbjct: 379 NQASQGNLKNNPFSNTYNPGWRNHPNFSWKGQSLYNQQMPPKANYPSGFRLQNQLAYSSQ 438
BLAST of PI0009091 vs. NCBI nr
Match:
XP_038889363.1 (uncharacterized protein LOC120079279 [Benincasa hispida])
HSP 1 Score: 271.6 bits (693), Expect = 9.7e-69
Identity = 150/370 (40.54%), Postives = 222/370 (60.00%), Query Frame = 0
Query: 20 ENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFHMPGISLEELRFALFPL 79
EN RF+IK VMLQM+QN GQFG ED H H+ SF +C++F + G++ E +R LFP
Sbjct: 4 ENTRFKIKSVMLQMVQNTGQFGGLQGEDLHAHLTSFVEMCSTFSISGVTPEGIRLYLFPY 63
Query: 80 TLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKELMSFQQKDRENLHDAW 139
TLRDEA WA++LE E+ +WDQL+E FMKKFFPP NARRRK++++F+Q + E L W
Sbjct: 64 TLRDEANIWAHSLEPNEITSWDQLVEWFMKKFFPPTVNARRRKDVLNFEQMNNETLSTTW 123
Query: 140 SRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGMLKSTYNQIKTTLDTMA 199
+R+VK C H GIP C+LM+ FY GLN++TQ ADA + G + TY + K L ++
Sbjct: 124 VHLRRLVKNCLHIGIPDCVLMKTFYNGLNRSTQVVADASVARGFMDKTYTEAKVILHRIS 183
Query: 200 SNNEEWDEDDFGNRRGGRAKGDDG-MDKSAVVALQGQMTAMNNLLKSMTISQ--VNVEGS 259
N ++ +D +G R R + D+ + + L QM A+ +LL++M ++Q ++ +
Sbjct: 184 RNTDDCVDDGYGGRGSERRRNDNAIVPLDTMTTLAAQMAAVTSLLQTMALNQGALSQISA 243
Query: 260 SVHAANQIDDMRCVGCGG----HPN-------TDACPLNTET------------------ 319
+A Q+ + CV CGG HPN P N ++
Sbjct: 244 QPNAPAQVAAISCVQCGGGHANHPNFGWGGNHNQGGPSNHQSNNFENRGNSPPFHQNQNQ 303
Query: 320 ----QP------TTTASSTSPMESLLREYMQKNDPLLQSQASSIRNLEVQLGQLASDFSG 348
QP + T++++S +ESLL++Y++KND ++QSQ SSIRNLE+Q+GQLA++
Sbjct: 304 GHQPQPQNLPSSSNTSANSSSLESLLKQYIEKNDVVMQSQVSSIRNLEIQVGQLATELRN 363
BLAST of PI0009091 vs. NCBI nr
Match:
XP_030497803.1 (uncharacterized protein LOC115713460 [Cannabis sativa])
HSP 1 Score: 266.5 bits (680), Expect = 3.1e-67
Identity = 159/398 (39.95%), Postives = 207/398 (52.01%), Query Frame = 0
Query: 4 PTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFH 63
P NPGI P + FE+K VM QM+Q GQFG P EDPH HIRSF + SF
Sbjct: 33 PMFNELNPGIVRPEI-QAPHFELKPVMFQMLQTVGQFGGSPTEDPHLHIRSFLEVSDSFK 92
Query: 64 MPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKE 123
+ G+S E LR LFP +LRD A+ W N L V W+ L EKF++K+FPP NA+ R E
Sbjct: 93 LQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNWNDLAEKFLRKYFPPTRNAKFRSE 152
Query: 124 LMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGM 183
+MSFQQ + E DAW RFK +++ CPH+GIP CI +E FY GLN A++ DA +
Sbjct: 153 IMSFQQSEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNGLNAASRMVLDASANGAI 212
Query: 184 LKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNLL 243
L +YN+ L+ +ASNN +W NR K ++ A+ AL QM +M N+L
Sbjct: 213 LSKSYNEAFEILERIASNNYQWST----NRAHTSRKVAGVLEVDALTALTAQMASMTNIL 272
Query: 244 KSMTISQVNVEGSSVHAANQIDDMR--CVGCGGHPNTDACPLNTET-------------- 303
K+M + G SV A I + CV CG + CP N +
Sbjct: 273 KNMNM------GGSVQPAAAIQRAKNSCVYCGDGHTFENCPSNLASVCYVGNQNFNRNNN 332
Query: 304 -------------------------------------QP-TTTASSTSPMESLLREYMQK 348
QP S TS +ESL+R+YM K
Sbjct: 333 PYSNSYNPAWKHHPNFSWGGQGKQSFPPGFSQQPRPQQPHQPQGSQTSSLESLMRDYMAK 392
BLAST of PI0009091 vs. NCBI nr
Match:
XP_030510138.1 (uncharacterized protein LOC115724905 [Cannabis sativa])
HSP 1 Score: 260.8 bits (665), Expect = 1.7e-65
Identity = 157/397 (39.55%), Postives = 206/397 (51.89%), Query Frame = 0
Query: 10 NPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFHMPGISL 69
NPGI P + FE+K VM QM+Q GQFG P EDPH HI SF + SF + G+S
Sbjct: 6 NPGIVRPEI-QAPHFELKPVMFQMLQTVGQFGGSPTEDPHLHIHSFLEVSDSFKLQGVSE 65
Query: 70 EELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKELMSFQQ 129
E LR LFP +LRD A+ W N L V W+ L E F++K+FPP NA+ R E+MSFQQ
Sbjct: 66 EALRLKLFPFSLRDRARAWLNTLPSDSVTNWNDLAENFLRKYFPPTRNAKFRSEIMSFQQ 125
Query: 130 KDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGMLKSTYN 189
+ E DAW RFK +++ CPH+GIP CI +E FY GLN A++ DA +L +YN
Sbjct: 126 LEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNGLNAASRMVLDASANGAILSKSYN 185
Query: 190 QIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNLLKSMTIS 249
+ L+ +ASNN +W NR K ++ A+ AL QM +M N+LK+M +
Sbjct: 186 EAFEILERIASNNYQWST----NRAPTSRKVAGVLEVDALTALTAQMASMTNILKNMNM- 245
Query: 250 QVNVEGSSVH--AANQIDDMRCVGCGGHPNTDACPLNTET-------------------- 309
G SV AA Q ++ CV CG + CP N +
Sbjct: 246 -----GGSVQPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYVGNQNFNRNNNPYSNSY 305
Query: 310 ------------------------------------QP-TTTASSTSPMESLLREYMQKN 348
QP S TS +ESL+R+YM KN
Sbjct: 306 NPAWKHHPNFSWGGQGASSSGAQGQGKQSFPPGFSQQPHQPQGSQTSSLESLMRDYMAKN 365
BLAST of PI0009091 vs. NCBI nr
Match:
XP_030505184.1 (uncharacterized protein LOC115720166 [Cannabis sativa])
HSP 1 Score: 257.3 bits (656), Expect = 1.9e-64
Identity = 153/402 (38.06%), Postives = 206/402 (51.24%), Query Frame = 0
Query: 4 PTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFH 63
P NPGI P + +FE+K VM QM+Q GQF E P EDPH H+RSF + SF
Sbjct: 34 PMFNELNPGIVRPEI-QAPQFELKPVMFQMLQTVGQFSEMPTEDPHLHLRSFLEMSDSFK 93
Query: 64 MPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKE 123
+ G+S E R LFP +LRD A+ W N L V W+ EKF++K+FPP NA+ R E
Sbjct: 94 IQGVSEEVRRLKLFPFSLRDRARSWLNTLSPDSVTNWNDFAEKFLRKYFPPTRNAKFRSE 153
Query: 124 LMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGM 183
+MSF Q + E+ DAW RFK +++ CPH+GIP CI ME FY GLN +Q DA +
Sbjct: 154 IMSFHQLEDESASDAWERFKELLRKCPHHGIPHCIQMETFYNGLNATSQMVLDASANGAI 213
Query: 184 LKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNLL 243
L +YN+ L+T+ASNN +W R G K ++ A+ AL QM +M N+L
Sbjct: 214 LSKSYNEAFEILETIASNNYQWS----NTRAPGSRKVAGVLEVDAITALTTQMASMTNVL 273
Query: 244 KSMTISQVNVEGSSVHAANQIDDMRCVGCGGHPNTDACPLNTET---------------- 303
K+++I N + AA Q DD+ CV C + CP N E+
Sbjct: 274 KNLSIG--NSKNIQPAAAIQSDDVSCVFCREGHAFEKCPSNPESVCYMGNQNFNRNNGAF 333
Query: 304 ----------QPTTT--------------------------------ASSTSPMESLLRE 348
P + S S +ESL+R+
Sbjct: 334 SNSYNQAWKNHPNLSWGSRSKLKHFDQGRQAYPPGFSQQLRHPQHAQNSQPSSLESLMRD 393
BLAST of PI0009091 vs. NCBI nr
Match:
XP_030508936.1 (uncharacterized protein LOC115723589 [Cannabis sativa])
HSP 1 Score: 246.5 bits (628), Expect = 3.3e-61
Identity = 153/396 (38.64%), Postives = 200/396 (50.51%), Query Frame = 0
Query: 4 PTSTTFNPGIAYPVFGENARFEIKHVMLQMIQNAGQFGEHPREDPHEHIRSFYSICASFH 63
P NPGI P + FE+K VM QM+Q GQFG P EDPH HIRSF + SF
Sbjct: 68 PMFNELNPGIVRPEI-QAPHFELKPVMFQMLQTVGQFGGSPTEDPHLHIRSFLEVSDSFK 127
Query: 64 MPGISLEELRFALFPLTLRDEAKRWANALEDGEVGTWDQLIEKFMKKFFPPYENARRRKE 123
+ G+S E LR LFP +LRD A+ W N L V W+ L EKF++K+FPP NA+ R E
Sbjct: 128 LQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNWNDLAEKFLRKYFPPTRNAKFRSE 187
Query: 124 LMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVLVDGM 183
+MSFQQ + E DAW RFK +++ CPH+GIP CI +E FY GLN A + DA +
Sbjct: 188 IMSFQQLEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNGLNAAARMVLDAFANGAI 247
Query: 184 LKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKGDDGMDKSAVVALQGQMTAMNNLL 243
L +YN+ L+ +ASNN +W NR K ++ A+ AL QM +M N+L
Sbjct: 248 LSKSYNEAFEILERIASNNYQWST----NRAPTSRKVAGVLEVDALTALTAQMASMTNIL 307
Query: 244 KSMTISQVNVEGSSVH--AANQIDDMRCVGCG-GHP-------------------NTDAC 303
K+M + G SV AA Q ++ CV CG GH N +
Sbjct: 308 KNMNM------GGSVQPAAAIQRAEISCVYCGDGHTFENFPSNPASVCYVGNQNFNRNNN 367
Query: 304 PLNTETQPT-------------------------------------------TTASSTSP 335
P + P S TS
Sbjct: 368 PYSNSYNPAWKHHPNFSWGGQGASSSGAQQAQGKQSFLPGFSQQPRPQQPHQPQGSQTSS 427
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
U5CUI2 | 1.1e-57 | 43.51 | Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMT... | [more] |
A0A6J1G7Q6 | 4.3e-54 | 32.78 | uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC1114515... | [more] |
A0A5D3CC26 | 8.0e-53 | 50.62 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1EEI2 | 8.0e-53 | 33.42 | uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333... | [more] |
A0A6J1EQ90 | 8.0e-53 | 33.66 | uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC1114364... | [more] |
Match Name | E-value | Identity | Description | |