PI0009052 (gene) Melon (PI 482460) v1

Overview
NamePI0009052
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 3571414 .. 3572334 (+)
RNA-Seq ExpressionPI0009052
SyntenyPI0009052
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGGTAAAAACCAACCCTAATGTCTTAGATTTGATGTGAATTTATGGATATTCTGGTGAAGCAGTATTTATTATATGCCTTAGCAGTTTATGACGACATCAATGATAGGCCAACCTTCAATGGATCCTGGGGAACTAAAGGAATACGGCAGTTTCTGGCAGTAAGTTTGAGGATGAAACGAGGTTGATCTTGCATGTCGTAAGTAGTAATGCAATCATCCAATGATAAAGCTAATCCAAATTATAGAGCTCTGACACAATCAAACTCGAAACGAGCAAAATGTTGAATTAAATCTTACCGGTTATTACTCATTTTTGTACTTTTTTATTTTTCAATTATTTCTTCTATTTAAACTAAAAAAATTACTAAATAATAGTACAAATATTCTTATCTGATTTGGAAGGATATCATCTAATAACTATCTATGTCTGTTTTTGTCTCTAGCACACGACCACTTGATGAAATGGGGACGAAAGTGGGACAAATGGCCCAGACGACTGGAAGGCTTCATTATTGGATAATAGGTACTGTAATTGATATTCTACGGTCGGTTTAGTCACCATTACGATGTTGACCATTACGGTTTAGTCACAAATATAATAGCATATATTCTTTTATTTTTCTTGATGTTGTTTGAGTATGAGAATCTTATTCTCAAAACCCGGGGGAAAATTAAGATGCTACTTAGATAACAATTGAGAAGTAGTCTGTTTATTCCTCAATTTTTCATATCAAGTGAAGTTTATACGGATCAAACTTCTCTTCTTAGAGCTTTTGTGAAATTTCATTGCTTTAGAAATCTCATTAAAGAAGGTCGGGGTACTTCTTTAGGGAAGTGGATTATGTAACATTAAAAACTCTAACCTTTTTCGTTTGTTGTAGTTCTTACTTTTGCCTCTTCAGAAAATGATATCTGA

mRNA sequence

ATGCCAGTTTATGACGACATCAATGATAGGCCAACCTTCAATGGATCCTGGGGAACTAAAGGAATACGGCACACACGACCACTTGATGAAATGGGGACGAAAGTGGGACAAATGGCCCAGACGACTGGAAGGCTTCATTATTGGATAATAGTTCTTACTTTTGCCTCTTCAGAAAATGATATCTGA

Coding sequence (CDS)

ATGCCAGTTTATGACGACATCAATGATAGGCCAACCTTCAATGGATCCTGGGGAACTAAAGGAATACGGCACACACGACCACTTGATGAAATGGGGACGAAAGTGGGACAAATGGCCCAGACGACTGGAAGGCTTCATTATTGGATAATAGTTCTTACTTTTGCCTCTTCAGAAAATGATATCTGA

Protein sequence

MPVYDDINDRPTFNGSWGTKGIRHTRPLDEMGTKVGQMAQTTGRLHYWIIVLTFASSENDI
Homology
[Close]
BLAST of PI0009052 vs. ExPASy TrEMBL
Match: A0A0A0KXQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025710 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.4e-10
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 0 

Query: 1  MPVYDDINDRPTFNGSWGTKGIRH---TRPLDEMGTKVGQMAQTTGRLHYWII 51
          MPVYDDIN+RPTFNGS GTKGI        L + G KVGQMA+TT RL YWII
Sbjct: 1  MPVYDDINERPTFNGSGGTKGIWQFLARNHLMKWGKKVGQMAKTTARLSYWII 53

[Close]
BLAST of PI0009052 vs. NCBI nr
Match: KGN53192.1 (hypothetical protein Csa_014660 [Cucumis sativus])

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-09
Identity = 36/53 (67.92%), Postives = 39/53 (73.58%), Query Frame = 0 

Query: 1  MPVYDDINDRPTFNGSWGTKGIRH---TRPLDEMGTKVGQMAQTTGRLHYWII 51
          MPVYDDIN+RPTFNGS GTKGI        L + G KVGQMA+TT RL YWII
Sbjct: 1  MPVYDDINERPTFNGSGGTKGIWQFLARNHLMKWGKKVGQMAKTTARLSYWII 53

The following BLAST results are available for this feature:
BLAST of PI0009052 vs.
Match NameE-valueIdentityDescription
BLAST of PI0009052 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXQ37.4e-1067.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G025710 PE=4 SV=1[more]
BLAST of PI0009052 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53192.11.5e-0967.92hypothetical protein Csa_014660 [Cucumis sativus][more]
BLAST of PI0009052 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0009052.1PI0009052.1mRNA