PI0008963 (gene) Melon (PI 482460) v1

Overview


Name	PI0008963
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Thioredoxin domain-containing protein
Location	chr08: 12607916 .. 12609699 (-)
RNA-Seq Expression	PI0008963
Synteny	PI0008963

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCAAGTCCCATCCCATCCCCTCCCCTCCCCTCTCACGTGCTACTCCTTGGGCTTACGGATAAGCACTCCAAAAAAAAACGCTTTCCCTTCCACAGTTCCACTTCTTCTTCTCTCTCGATTTCAAAATCACATCCAAAAAAAAAGGAAAGAAAACCTTAAAAACAGAGAGAGTGAAACAGACATGTCTGTTTTGGGTGCAAGTAGTTCTCACATTCTTTACACACAACTTCACCAACACCAATTTCTAAGCAATGGGAAGCGTTGTAGTTTTCTCAATACAGATTTTGGAGATCACCGGCGGAGGGAGCTCCGGATCAAGGCCGAGGCTGGCTTTTGGCCGGATTTATCAAGACCGGCGTCGGTGGAAATGGAATCCATCGATGATTCCGATCAACTCGATCGGATTTTGATCCACGCTCAACAACTTTCTCAGCCAATTCTTATTGATTGGTTCGTATAATTTCCTCTATCCTTTCATTCCAAGGGCTTTTTTGTAATTTCCTGTCTCTCTTTTTGAAATTACAAATTTAATCTTTTATTTTATTTTATATGGTCTAGGATTTCAAATTAGTGATTTTGTTTTTAATTAGCTGAATTTGGTTTTTTCACTATCAAATTCAACATTTTAATAATAATAATAATAATATATGTATACATTTAGCTAACCATTTCACTCTTAATCATTTGTTTTTATATTATGAACACATCTTTCAAACTTTGAAAACTAACTTAAAAAACAATTTTTGAAAATGTCTCCTTTTAAAAAAAAAAAAAAAAAATTGTTATGGTTACTTAAATTGATTTTGAGTATGTTTGGAAAAGATTTTAAATGTAATATAACTAATTCAAAATCAATTATTAATTTAAATTGAAGTGTTTTGTTTTGGAGAATATTATAAATTAGGTCTGTATGTGATATTAATATTAAATAAATGGGGAAAAATAGGATGGCAACTTGGTGTAGGAAATGCATCTACTTGAAGCCTAAACTCGAGAAACTTGCTGCTGATTATGTTACCAAGTAACCTTCTATGCTATCTTTTTTATTATTTTTTTTTTCTCTCTACTTCTGTTATGCAAACAATAATTTATGTAGTGCTTAAATTTCAGAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAACATCTCTGTAAGTATAATCTATATAATCCTTTGAAGCTTCTTCAATTCTTTACTTTTCTAATTATTCTAATTATTTCAATTTTTTTATTTTTTATTTTTTTCTTTCTGCAGAAAATGCCAACAATTCAGGTGACCACTTTTTCTTAATCTTCAATTTTAGATTAATTTTTTTACAAAAAAGAATGCTTTTTGGTGAAGTACGTTTTTGTTTTTTTTTTTTCCATAAAAATATGAATTTGAATATTTGAGAGTGGTACAAATGAGTTGTTCATAATTTGTTCTAAAGTTATTAATTTATTAGCTTTGGAAAGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGTTTCATAATATTCTGTTCACAACACTTTCTTTGTTTGTTCATTTATTATAATTACTTCATCTTCAACCTCCCCTTACCTCAAATTTCATTCTCAAAATTTTCATTATATAATATACATTCCTATATTTGTAAACTTTAATTTAATGTACATATATAACAATATGTCTATGTCAAATCTTGACACCTTTAATTTTATAGGTTTGTTACACATAATCAA

mRNA sequence

TCCCAAGTCCCATCCCATCCCCTCCCCTCCCCTCTCACGTGCTACTCCTTGGGCTTACGGATAAGCACTCCAAAAAAAAACGCTTTCCCTTCCACAGTTCCACTTCTTCTTCTCTCTCGATTTCAAAATCACATCCAAAAAAAAAGGAAAGAAAACCTTAAAAACAGAGAGAGTGAAACAGACATGTCTGTTTTGGGTGCAAGTAGTTCTCACATTCTTTACACACAACTTCACCAACACCAATTTCTAAGCAATGGGAAGCGTTGTAGTTTTCTCAATACAGATTTTGGAGATCACCGGCGGAGGGAGCTCCGGATCAAGGCCGAGGCTGGCTTTTGGCCGGATTTATCAAGACCGGCGTCGGTGGAAATGGAATCCATCGATGATTCCGATCAACTCGATCGGATTTTGATCCACGCTCAACAACTTTCTCAGCCAATTCTTATTGATTGGATGGCAACTTGGTGTAGGAAATGCATCTACTTGAAGCCTAAACTCGAGAAACTTGCTGCTGATTATGTTACCAAAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAAGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGTTTCATAATATTCTGTTCACAACACTTTCTTTGTTTGTTCATTTATTATAATTACTTCATCTTCAACCTCCCCTTACCTCAAATTTCATTCTCAAAATTTTCATTATATAATATACATTCCTATATTTGTAAACTTTAATTTAATGTACATATATAACAATATGTCTATGTCAAATCTTGACACCTTTAATTTTATAGGTTTGTTACACATAATCAA

Coding sequence (CDS)

ATGTCTGTTTTGGGTGCAAGTAGTTCTCACATTCTTTACACACAACTTCACCAACACCAATTTCTAAGCAATGGGAAGCGTTGTAGTTTTCTCAATACAGATTTTGGAGATCACCGGCGGAGGGAGCTCCGGATCAAGGCCGAGGCTGGCTTTTGGCCGGATTTATCAAGACCGGCGTCGGTGGAAATGGAATCCATCGATGATTCCGATCAACTCGATCGGATTTTGATCCACGCTCAACAACTTTCTCAGCCAATTCTTATTGATTGGATGGCAACTTGGTGTAGGAAATGCATCTACTTGAAGCCTAAACTCGAGAAACTTGCTGCTGATTATGTTACCAAAGTAAAATTCTACTATGTAGATGTGAATAAGGTCCCTCAATCTCTTGTAAAACGTGGAAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAAGATGGAGAGATGAAAGCAGAAGTAATTGGAGGGCACAAAGCTTGGCTTGTGATTGAAGAAGTTAGAGAAATGATCCAAAAGTTTGTTTCATAA

Protein sequence

MSVLGASSSHILYTQLHQHQFLSNGKRCSFLNTDFGDHRRRELRIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFVS

Homology

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BLAST of PI0008963 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 105/167 (62.87%), Postives = 131/167 (78.44%), Query Frame = 0


Query: 15  QLHQHQFLSNGKRCSFL-----NTDFG-DHRRRELRIKAEAGFWPDLSRPASVEMESIDD 74
           QL + + L+  K+C F      N   G  H  +E R+KA   FW ++++P ++EME I++
Sbjct: 47  QLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA---FWSNIAQPTTLEMEPINN 106

Query: 75  SDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQ 134
            ++LD +L HA+QLSQPI+I+WMA+WCRKCIYLKPKLEKLAA+Y  + KFYYVDVNKVPQ
Sbjct: 107 VEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQ 166

Query: 135 SLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFV 176
           +LVKRGNISKMPTIQLWK+ EMK EVIGGHK WLVIEEVRE+I KFV
Sbjct: 167 TLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINKFV 210

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BLAST of PI0008963 vs. ExPASy Swiss-Prot
Match: Q6Z7L3 (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 3.9e-45
Identity = 93/141 (65.96%), Postives = 114/141 (80.85%), Query Frame = 0


Query: 36  GDHRRREL---RIKAEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMA 95
           G  RRRE     ++AEA FW D+S+P  VEME ID  ++LD  L  + +  QPI+IDWMA
Sbjct: 55  GKGRRRERGDGMLRAEAYFW-DVSKP--VEMEEIDSMEKLDDALRWSVENKQPIIIDWMA 114

Query: 96  TWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKA 155
           +WCRKCIYLKP+LEK+A ++   V+FY+VDVNKVPQ++VKRGNI+KMPTIQLWKDGE  A
Sbjct: 115 SWCRKCIYLKPRLEKIAGEF-PGVRFYFVDVNKVPQTVVKRGNITKMPTIQLWKDGEWAA 174

Query: 156 EVIGGHKAWLVIEEVREMIQK 174
           EVIGGHKAWLV++EVREMIQK
Sbjct: 175 EVIGGHKAWLVMDEVREMIQK 191

[Close]

BLAST of PI0008963 vs. ExPASy Swiss-Prot
Match: Q8VZT6 (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-35
Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 39  RRRELRIKAEAGFWPDL-SRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRK 98
           R R + I+ + G   +L   P SVE+  I      D+++  AQ+L + ++I WMA WCRK
Sbjct: 53  RIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRK 112

Query: 99  CIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGG 158
           CIYLKPKLEKLAA++  +++FY+VDVN VP  LV R  ++KMPTIQLW+DG+ +AEVIGG
Sbjct: 113 CIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGG 172

Query: 159 HKAWLVIEEVREMIQ 173
           HKA  V+ EVREMI+
Sbjct: 173 HKAHFVVNEVREMIE 187

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BLAST of PI0008963 vs. ExPASy Swiss-Prot
Match: Q1RQJ1 (Thioredoxin Asp f 28 OS=Neosartorya fumigata OX=746128 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.2e-10
Identity = 38/99 (38.38%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 75  ILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRG 134
           I+  A   S P+++D+ ATWC  C  + PK+ +L+  Y + V+F  VDV+KV +S+    
Sbjct: 13  IIYKALTSSGPVVVDFFATWCGPCRAVAPKVGELSEKY-SNVRFIQVDVDKV-RSVAHEM 72

Query: 135 NISKMPTIQLWKDGE-MKAEVIGGHKAWLVIEEVREMIQ 173
           NI  MPT  L+KDG+ ++  V+GG+     + E+ EMI+
Sbjct: 73  NIRAMPTFVLYKDGQPLEKRVVGGN-----VRELEEMIK 104

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BLAST of PI0008963 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-09
Identity = 34/117 (29.06%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 59  ASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKF 118
           A+VE+ ++ DS+   ++L    +   P+L+++ A WC  C  + P +++LA D+  K KF
Sbjct: 84  AAVEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKF 143

Query: 119 YYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFV 176
           Y ++ ++ P +   R  I  +PT+ ++K GE K  +IG     +  E + + I++F+
Sbjct: 144 YKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIGA----VPRETLEKTIERFL 191

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BLAST of PI0008963 vs. ExPASy TrEMBL
Match: A0A1S3B504 (thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.2e-94
Identity = 172/176 (97.73%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 1   MSVLGASSSHILYTQLHQHQFLSNGKRCSFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60
           M VLGASSSHILY QLHQHQFLSNGKRC FLNTDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120
           VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120

Query: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFVS 177
           VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKF S
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

[Close]

BLAST of PI0008963 vs. ExPASy TrEMBL
Match: A0A0A0KZ53 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496780 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 166/176 (94.32%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MSVLGASSSHILYTQLHQHQFLSNGKRCSFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60
           MSVLGAS+SHILY  LHQH FL+N KRCSFL+TDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120
           VEMESIDDSDQLDRILIHAQ LSQPILIDWMATWCRKCIYLKPKLEKLAADYVTK KFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKAKFYY 120

Query: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFVS 177
           VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKF S
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

[Close]

BLAST of PI0008963 vs. ExPASy TrEMBL
Match: A0A6J1HTV8 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.5e-75
Identity = 145/189 (76.72%), Postives = 158/189 (83.60%), Query Frame = 0


Query: 1   MSVLGASSSHILYTQLH--QHQFLSNGKRCSFLNTDFGD------------HRRRELRIK 60
           MSVL AS++ ILY+++H  QHQ  SNG R  F+N DFG              RRRE R+ 
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 61  AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLE 120
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LIDWMATWCRKCIYLKPKLE
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 121 KLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 176
           KL ADY+TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

[Close]

BLAST of PI0008963 vs. ExPASy TrEMBL
Match: A0A5D3C8R2 (Thioredoxin-like 3-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold427G00010 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.9e-74
Identity = 140/144 (97.22%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MSVLGASSSHILYTQLHQHQFLSNGKRCSFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60
           M VLGASSSHILY QLHQHQFLSNGKRC FLNTDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120
           VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120

Query: 121 VDVNKVPQSLVKRGNISKMPTIQL 145
           VDVNKVPQSLVKRGNISKMPTIQ+
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQV 144

[Close]

BLAST of PI0008963 vs. ExPASy TrEMBL
Match: A0A6J1EDU4 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432326 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.9e-74
Identity = 145/189 (76.72%), Postives = 159/189 (84.13%), Query Frame = 0


Query: 1   MSVLGASSSHILYTQLH--QHQFLSNGKRCSFLNTDFGD------------HRRRELRIK 60
           MSVL A+++ ILY++ H  QHQ  SNG R  F+N DFG              RRREL++ 
Sbjct: 1   MSVLAATTAQILYSEAHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 61  AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLE 120
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LIDWMATWCRKCIYLKPKLE
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 121 KLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 176
           KLAADY+TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

[Close]

BLAST of PI0008963 vs. NCBI nr
Match: XP_008442136.1 (PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo])

HSP 1 Score: 353.2 bits (905), Expect = 1.3e-93
Identity = 172/176 (97.73%), Postives = 172/176 (97.73%), Query Frame = 0


Query: 1   MSVLGASSSHILYTQLHQHQFLSNGKRCSFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60
           M VLGASSSHILY QLHQHQFLSNGKRC FLNTDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MYVLGASSSHILYAQLHQHQFLSNGKRCGFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120
           VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120

Query: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFVS 177
           VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKF S
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

[Close]

BLAST of PI0008963 vs. NCBI nr
Match: XP_004146393.3 (thioredoxin-like 3-1, chloroplastic isoform X1 [Cucumis sativus] >KGN54788.1 hypothetical protein Csa_012348 [Cucumis sativus])

HSP 1 Score: 342.4 bits (877), Expect = 2.3e-90
Identity = 166/176 (94.32%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 1   MSVLGASSSHILYTQLHQHQFLSNGKRCSFLNTDFGDHRRRELRIKAEAGFWPDLSRPAS 60
           MSVLGAS+SHILY  LHQH FL+N KRCSFL+TDFGDHRRRELRIKAEAGFWPDLSRPAS
Sbjct: 1   MSVLGASTSHILYPPLHQHHFLTNAKRCSFLSTDFGDHRRRELRIKAEAGFWPDLSRPAS 60

Query: 61  VEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYY 120
           VEMESIDDSDQLDRILIHAQ LSQPILIDWMATWCRKCIYLKPKLEKLAADYVTK KFYY
Sbjct: 61  VEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKAKFYY 120

Query: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFVS 177
           VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKF S
Sbjct: 121 VDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFAS 176

[Close]

BLAST of PI0008963 vs. NCBI nr
Match: XP_038883417.1 (thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 330.5 bits (846), Expect = 8.9e-87
Identity = 166/179 (92.74%), Postives = 169/179 (94.41%), Query Frame = 0


Query: 1   MSVLGASSSHILYTQLHQHQFLSNGKRCSFLNTDF---GDHRRRELRIKAEAGFWPDLSR 60
           MSVLGA+SS ILY QLHQHQ LS GKRC FLNTDF   GD RRRELRIKAEAGFWPDLSR
Sbjct: 1   MSVLGANSSQILYRQLHQHQILSTGKRC-FLNTDFGLLGDQRRRELRIKAEAGFWPDLSR 60

Query: 61  PASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK 120
           PA+VEMESIDDSD LDRILIH+QQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK
Sbjct: 61  PAAVEMESIDDSDHLDRILIHSQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVK 120

Query: 121 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFVS 177
           FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFVS
Sbjct: 121 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFVS 178

[Close]

BLAST of PI0008963 vs. NCBI nr
Match: XP_022966464.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 290.0 bits (741), Expect = 1.3e-74
Identity = 145/189 (76.72%), Postives = 158/189 (83.60%), Query Frame = 0


Query: 1   MSVLGASSSHILYTQLH--QHQFLSNGKRCSFLNTDFGD------------HRRRELRIK 60
           MSVL AS++ ILY+++H  QHQ  SNG R  F+N DFG              RRRE R+ 
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 61  AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLE 120
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LIDWMATWCRKCIYLKPKLE
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 121 KLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 176
           KL ADY+TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

[Close]

BLAST of PI0008963 vs. NCBI nr
Match: KAG6595600.1 (Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 145/189 (76.72%), Postives = 160/189 (84.66%), Query Frame = 0


Query: 1   MSVLGASSSHILYTQLH--QHQFLSNGKRCSFLNTDFGD------------HRRRELRIK 60
           MSVL A+++ ILY+++H  QHQ  SNG R  F+N DFG              RRREL++ 
Sbjct: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 61  AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLE 120
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LIDWMATWCRKCIYLKPKLE
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 121 KLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 176
           KLAADY+TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

[Close]

BLAST of PI0008963 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-55
Identity = 105/167 (62.87%), Postives = 131/167 (78.44%), Query Frame = 0


Query: 15  QLHQHQFLSNGKRCSFL-----NTDFG-DHRRRELRIKAEAGFWPDLSRPASVEMESIDD 74
           QL + + L+  K+C F      N   G  H  +E R+KA   FW ++++P ++EME I++
Sbjct: 47  QLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA---FWSNIAQPTTLEMEPINN 106

Query: 75  SDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQ 134
            ++LD +L HA+QLSQPI+I+WMA+WCRKCIYLKPKLEKLAA+Y  + KFYYVDVNKVPQ
Sbjct: 107 VEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQ 166

Query: 135 SLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFV 176
           +LVKRGNISKMPTIQLWK+ EMK EVIGGHK WLVIEEVRE+I KFV
Sbjct: 167 TLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIEEVRELINKFV 210

[Close]

BLAST of PI0008963 vs. TAIR 10
Match: AT5G04260.1 (WCRKC thioredoxin 2 )

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-36
Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 0


Query: 39  RRRELRIKAEAGFWPDL-SRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRK 98
           R R + I+ + G   +L   P SVE+  I      D+++  AQ+L + ++I WMA WCRK
Sbjct: 53  RIRAVDIQKQDGGLQELDDSPVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRK 112

Query: 99  CIYLKPKLEKLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGG 158
           CIYLKPKLEKLAA++  +++FY+VDVN VP  LV R  ++KMPTIQLW+DG+ +AEVIGG
Sbjct: 113 CIYLKPKLEKLAAEFYPRLRFYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGG 172

Query: 159 HKAWLVIEEVREMIQ 173
           HKA  V+ EVREMI+
Sbjct: 173 HKAHFVVNEVREMIE 187

[Close]

BLAST of PI0008963 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 147.5 bits (371), Expect = 1.0e-35
Identity = 73/129 (56.59%), Postives = 97/129 (75.19%), Query Frame = 0


Query: 15  QLHQHQFLSNGKRCSFL-----NTDFG-DHRRRELRIKAEAGFWPDLSRPASVEMESIDD 74
           QL + + L+  K+C F      N   G  H  +E R+KA   FW ++++P ++EME I++
Sbjct: 47  QLWRKESLNLEKKCGFCVSVYSNEKLGRSHMEKEWRLKA---FWSNIAQPTTLEMEPINN 106

Query: 75  SDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQ 134
            ++LD +L HA+QLSQPI+I+WMA+WCRKCIYLKPKLEKLAA+Y  + KFYYVDVNKVPQ
Sbjct: 107 VEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQ 166

Query: 135 SLVKRGNIS 138
           +LVKRGNIS
Sbjct: 167 TLVKRGNIS 172

[Close]

BLAST of PI0008963 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10
Identity = 34/117 (29.06%), Postives = 67/117 (57.26%), Query Frame = 0


Query: 59  ASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKF 118
           A+VE+ ++ DS+   ++L    +   P+L+++ A WC  C  + P +++LA D+  K KF
Sbjct: 84  AAVEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKF 143

Query: 119 YYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQKFV 176
           Y ++ ++ P +   R  I  +PT+ ++K GE K  +IG     +  E + + I++F+
Sbjct: 144 YKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIGA----VPRETLEKTIERFL 191

[Close]

BLAST of PI0008963 vs. TAIR 10
Match: AT1G76760.1 (thioredoxin Y1 )

HSP 1 Score: 55.1 bits (131), Expect = 6.7e-08
Identity = 28/103 (27.18%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 70  DQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLEKLAADYVTKVKFYYVDVNKVPQS 129
           D  + +L+++    +P+L+D+ ATWC  C ++ P L +++     K++   +D  K P S
Sbjct: 71  DSFEDLLVNS---DKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYP-S 130

Query: 130 LVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIQ 173
           +  +  I  +PT  L+KDGE      G   A  +I+ + + ++
Sbjct: 131 IANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSLK 169

The following BLAST results are available for this feature:

BLAST of PI0008963 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG36	1.6e-54	62.87	Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE...	[more]
Q6Z7L3	3.9e-45	65.96	Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q8VZT6	2.8e-35	53.33	Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE...	[more]
Q1RQJ1	9.2e-10	38.38	Thioredoxin Asp f 28 OS=Neosartorya fumigata OX=746128 PE=1 SV=1	[more]
Q9SEU6	2.0e-09	29.06	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]

BLAST of PI0008963 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B504	6.2e-94	97.73	thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4...	[more]
A0A0A0KZ53	1.1e-90	94.32	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496780...	[more]
A0A6J1HTV8	6.5e-75	76.72	thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 ...	[more]
A0A5D3C8R2	1.9e-74	97.22	Thioredoxin-like 3-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold427...	[more]
A0A6J1EDU4	1.9e-74	76.72	thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143232...	[more]

BLAST of PI0008963 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442136.1	1.3e-93	97.73	PREDICTED: thioredoxin-like 3-1, chloroplastic [Cucumis melo]	[more]
XP_004146393.3	2.3e-90	94.32	thioredoxin-like 3-1, chloroplastic isoform X1 [Cucumis sativus] >KGN54788.1 hyp...	[more]
XP_038883417.1	8.9e-87	92.74	thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_022966464.1	1.3e-74	76.72	thioredoxin-like 3-1, chloroplastic [Cucurbita maxima]	[more]
KAG6595600.1	2.3e-74	76.72	Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of PI0008963 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06690.1	1.1e-55	62.87	WCRKC thioredoxin 1	[more]
AT5G04260.1	2.0e-36	53.33	WCRKC thioredoxin 2	[more]
AT5G06690.2	1.0e-35	56.59	WCRKC thioredoxin 1	[more]
AT3G15360.1	1.5e-10	29.06	thioredoxin M-type 4	[more]
AT1G76760.1	6.7e-08	27.18	thioredoxin Y1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 56..176 e-value: 4.5E-21 score: 76.8
None	No IPR available	PANTHER	PTHR47192:SF3	THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC	coord: 1..175
None	No IPR available	CDD	cd02947	TRX_family	coord: 83..172 e-value: 2.58E-21 score: 81.4504
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 82..160 e-value: 5.6E-17 score: 61.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 46..176 score: 10.58246
IPR044253	Thioredoxin-like 3-1/3-2	PANTHER	PTHR47192	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 1..175
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 62..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008963.1	PI0008963.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma