PI0008934 (gene) Melon (PI 482460) v1

Overview


Name	PI0008934
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ribosome assembly factor mrt4
Location	chr11: 30419371 .. 30424102 (+)
RNA-Seq Expression	PI0008934
Synteny	PI0008934

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAACCAAAAAGAATATAAAGAAAAAAAAAAGAAAACGTAAACCCTAGACTGAAACACTTCTTTTTCTCTATTTGTTCCATCGCTTGCCGCCAACTCTGCAACCATTTTTGATTTCTTTCTTCTCCCTTCTCCCTCTCCATCGCCGCCATTATCGCTCTCCGGTTCACCTCCACACTCAATTTTCTTTCTCCTCCTCTCATCTCTCTCTCTACTGTTGCAAAACTCCATCTCAAGGTCTGTATCAACTATCAAGGTTTTTTTTTTCTGCAGCAATAAAAGATGCCTAAGTCGAAGCGTGATAGACCAGGTACGTTTTAATTCCTCTTGGACTTATCTGTGCATTGTTTCCTGCTGCAAGAAGTTGAATCTGTTTCGTTATTTTGTGTTTTTGTTGGTTGTTCTATCTTGTTTGTTTTCCACACTTAAAGAAGTAGATTTTAGCTCATCTGGTTAACACAGTACAAGGAGAGATTAGTTTGATATGTTAGGGGAAGTTGTCACTGGAAAAGTTGTAGTTGAAAGATGGGTTGTTTTTTTTTTTTTTTTTTTGTGTATTTTTGCTATATGAGGGGAAGTTCATTCTGAAATGCTTAGTTCACTAGGTTGGCTGCAAGTGCACCGGCATTTGTGGTGTTACATTATGTAATAGGACCTGAATGTAAAAATATATGAATATCTTTAGTATGCACACAACTAAGTATATCTTTTTTATTGCTATTTTCATGAGACACCCCTGATGAAATTTGTTTCTTATTAAAAATAGGTAGCTTTTTTCCTTCATTTTACTCTGTGGCAATGATAAGTTGTGTGGTTTTCTAGTTTCTAAGTTTCTGACCAAATTTTTTAACACCAAAGAAGATATTTGGTATTTCTTAGGCTAGGTATTGTTTAGGCTTGAGATGGTCTTGATATCTTATCATCAGTTATGGAGAAATATTCCACTAGTTCCTTCGTTCTGACAAGGTTACCATAGTTGATAAATTGTTTATAGCAACTTTCCTTGTAATTCAGATTTATAAACTAGTTTTGATGTATTGTTTTGTTCATCTAAGGCTCTTCAAAGTTTTATTGACGATATTTGATGTGTTTCTTGTGCAAATACTTTAAGAGTGAGGAATTTGTAGGGCATCCTGATAAGGAGTAGCCAGTAGGTCATTTGCCACCCACTTCTTGAACTAATGCTTATTACAAATATGATGTTCTGTGAGCATCAAGCTTGCTTCCCTTGATGGTAGGGGATGCTTTAGTGTGCCCTAGAAGATAGTTTTTGTTGTCGAATTTGAGGGAAGAATAATTTTACTTTTTAGTATAGATGTTGCCAGGAGGTGGTTGGGTTGAAAGTTTCTATCTATGAGCAAAATATAGAGTTGCTTACAACACGGAACATGTCTAAAGATACAGCGTTTTTTACCTGTGATTAATATCTAAAAATATATACCTGGCAGGCCGATTAATGTTGTTAAACAGAAACCAAATAGCAGTAAACCTAGGGGAACTTAATGACTTGCTTAAGTGTAGGAAGATGCTAAAATTTTGTTCTTTTAATTCAAGGTTTTTGTTGAATATGGGTTAAAGGGTTAGTTATATTATGGGTTAATTTGTGTGAGGCAGTTTCTAGTGATAAGTATGAGGCAGTTGAAGAAGTTAAATGACTTGTGGTAGTATTCAGTGTCAAACTCATGTGGTTTTTAACTTAAAAAGAAAGAGGAAAAATATGAACTTAGTCCAATGCAGATTAGTGTTTTGAGTCTTTTGACTAATTGTTCGTGCGATAAATGCAGTTACTTTATCAAAAACAAAGAAGAAAGGAAGGGACCACAAGAAATCAATGGTGGAATTGATCAGGCAGGCTGTGGAACATTACAACTCAGTTTTTGTTTTCACTGTTGAGAACATGAGAAACCTTAAGTTCAAGGAACTCAGGGAGCAGCTGAAGTCCACTAGCAGGCAAGTTGTACTTCCTGACTTCTGTATTATTAATTTGCTTCATCATTTCAAATATTGATTAGAGATACAAATGCACTTCCTCTATGTTGTTTGGTTAGCTTCTGGATAGCACAAGAACAGATATGAATAATAAATAGCATGTTTTACAACTCAAAAGAAAAAGTCATACTGAATAGCATGTCTTAGGAGAAAGGATGAGAACGCGCTGTTGCCTTAACGACTGAAAATAACAATTTTAGCAGGTTATGGTAGCACCAAGTGTTTCCATGGTTACAGAGCAACCTTTCTCTCCTTGCTTTAAAAAGCTTCACTTAAAATAGGGGGTTACAACCTTTGGCTGCTCCTTGTGTACCTGTGTCTTAACATGTCTATTTTTTTTCTTCTTGAAGGCATCAATGATTTAGAAATTATATTACTTGACTTTGAAACATATTTTAGCTTTACATTATTAGATCATGCCTCTGATGCTCGTTCACATTTTTTAAGTGTAAAGATGTATAATGAGGCTAAATGGTTGAAAATCAGGATGTTCTGTTTGTGAACCTCATTTACTGCAATTTTTGAACTGCTGCTGAATGGCATTTTGGGATGTCATGCATGGCCTCCCTCAATTTTTCTAATGAATTGATGTGACCTGACCAGACTGAGTAGTTTTAAGTGGGTTTCCAAATTGACTTTTTTCCCCAATGATAGATTGTTTTTTGGAGCAAACAAAGTTATGCAAGTTTCTCTTGGGCGAAGTGCTTCCGATGAGATTCAACCAGGCCTTCACAAGGTTTCTAAGGTGAATCTCTTTTTCCAAATTGCATATACTTCAAGTGTTCTTTTTTTTTTTTGTAGTCTTTAGGAAGTAACATTCACTCTTCTATTTTCAGCTTTTGCATGGAAATACTGGAATTTGCTTCACAAACTTGCCAAAAGAAGAGGTTGAGAGGTAAATGGGCGTGCACTGTTTTAAATTTGACAAGCTTTGCCAAAAAGTAGTAGATTTGATAAGTTGCTATTTCTTTTTAAATTTAAATACTATGGTATTTAAATTTAATGAATTATGCATTCTGTTTTTGTTTAGCAGTTGAAGGATCAGATAAATTGTGCTCGATAAATTTCCATATCTATGAATACAAAAGTTTGAAACTTTCATTTGAGAAAGACACCTTAAAAATGAGATTTTTGGCCAAAAAAAAAATCCCAACTTTGTATCACATGGTTAGCATTTCAATTCTGAGGGAAGGGACTTCAAGAATAAATTGCTTAAAAGAAAATTCTCGTGTATTTGTTATCTTTTACAATAATGCTTGATTTAATTTTTAATGTTTTGTTATACAGGTTATTTAAAGAGTATGAGGATTATGATTATGCAAGGACTGGAAGTGCAGCCTCAGAAAAGGTTTGTGCCCCTTTGAACACGACATTTATCGAGTTTTCTTTTGTAATAATTTGATTGCACATTTTTTGAATGTGGTGATTCAACAAAAAGGTCTAGTATGATTTTATATAATCTGTGTTATAATTTGCATGTACTTGGTGGTTGGATGCTTTATTGAAGTTTAATGCTATTAGGTTGAGCTTAAGGAAGGTCCCCTAGAGCAGTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAGGGTCAGTTAATACACACTTTGTGCCTGGAAGCATTACGTATTTTTAAAAAGTTGGTTATAATCAGTATTCTTTGTGGAACAGGTGTGGTGGAGCTTGTATCAGACTTCGTTGTATGCGAGGAGGGAAAGTCTCTATCACCGGAGTCAGCTGGAATACTGGTTTGTGTCTTTTTGCGACTTGCTCTTTCCTTAAATCTATGTTGAATTTGACTTGTGGATGAGGTTCTGTGAAGTTGTTCCAGCAGTAGCGTTTGTCACTTCCAACTCCCATCTCAAATTAAGTGTGTTTTGAAGATGTTTTTGGAACAAGTACTTTGAGGGAAAACAATTTTTATAGGCACTTTTTTAATTATAGGATCTTTTGTGTTGCCATTGAGAGAACTGAGCGTTTATAAAAAAGAACAGGTGGCTTTGATGTCGGCATAGAGCAAATTGTCAGGTTCCTTGGGTTTTTGTTCTCTAAGTTTGAATTTTTTTATCTAGCAATTTGTAGTTTTAAAGAGAACTTTTATTTGTTTCTTCTTTACTGTTACTTCCTTAATTTGACATGATTTGTTCTGTAAGTTGTACGTTTGTGTGAGTTCTAATAACACTGTAGGCAAAAGCGATATCAATTGACAGTTGAAATATGAGGCTAAGAGACATTTTACTTTGGCATTGACATTTGAATGACGATTAAGATTTTTGATTTGATTTGATTTGATTTGGTTGCAGCGTGCTCTAGGGATAAGGATGGCAACTTTTCGGCTGAATTTGGTTTGCAGATGGAGCCCCGGTGACTTTGAACTTTACATTGATGGACCAGATAATTCTGATGTTGAATCTGCCTAAATCTCAACACATAGGAATCCAAATTATGATAATATATATGAATGCAATGCCAATGCAATGGCTGTCTTTAGGATTCATTGCCATAATACATATATATATATATGATTGGGATTCCTTCCTCTTTTTGATTTTGGTTTGTTTTTTACAAGTTATTGTAGTAGAAATACAAGTGCACCCCAGTCACTTAATGTGTTCCTTAGTTCAACAACAAACAAAGAAATCCTCAATTTTGTTGTGTTTAGTGAGATGGACAATTGGGTATTGTGATTTGGTAGATTTTTTCAATAGTATTATTAATCCA

mRNA sequence

AGAAAACCAAAAAGAATATAAAGAAAAAAAAAAGAAAACGTAAACCCTAGACTGAAACACTTCTTTTTCTCTATTTGTTCCATCGCTTGCCGCCAACTCTGCAACCATTTTTGATTTCTTTCTTCTCCCTTCTCCCTCTCCATCGCCGCCATTATCGCTCTCCGGTTCACCTCCACACTCAATTTTCTTTCTCCTCCTCTCATCTCTCTCTCTACTGTTGCAAAACTCCATCTCAAGGTCTGTATCAACTATCAAGGTTTTTTTTTTCTGCAGCAATAAAAGATGCCTAAGTCGAAGCGTGATAGACCAGTTACTTTATCAAAAACAAAGAAGAAAGGAAGGGACCACAAGAAATCAATGGTGGAATTGATCAGGCAGGCTGTGGAACATTACAACTCAGTTTTTGTTTTCACTGTTGAGAACATGAGAAACCTTAAGTTCAAGGAACTCAGGGAGCAGCTGAAGTCCACTAGCAGATTGTTTTTTGGAGCAAACAAAGTTATGCAAGTTTCTCTTGGGCGAAGTGCTTCCGATGAGATTCAACCAGGCCTTCACAAGGTTTCTAAGCTTTTGCATGGAAATACTGGAATTTGCTTCACAAACTTGCCAAAAGAAGAGGTTGAGAGGTTATTTAAAGAGTATGAGGATTATGATTATGCAAGGACTGGAAGTGCAGCCTCAGAAAAGGTTGAGCTTAAGGAAGGTCCCCTAGAGCAGTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAGGGTGTGGTGGAGCTTGTATCAGACTTCGTTGTATGCGAGGAGGGAAAGTCTCTATCACCGGAGTCAGCTGGAATACTGCGTGCTCTAGGGATAAGGATGGCAACTTTTCGGCTGAATTTGGTTTGCAGATGGAGCCCCGGTGACTTTGAACTTTACATTGATGGACCAGATAATTCTGATGTTGAATCTGCCTAAATCTCAACACATAGGAATCCAAATTATGATAATATATATGAATGCAATGCCAATGCAATGGCTGTCTTTAGGATTCATTGCCATAATACATATATATATATATGATTGGGATTCCTTCCTCTTTTTGATTTTGGTTTGTTTTTTACAAGTTATTGTAGTAGAAATACAAGTGCACCCCAGTCACTTAATGTGTTCCTTAGTTCAACAACAAACAAAGAAATCCTCAATTTTGTTGTGTTTAGTGAGATGGACAATTGGGTATTGTGATTTGGTAGATTTTTTCAATAGTATTATTAATCCA

Coding sequence (CDS)

ATGCCTAAGTCGAAGCGTGATAGACCAGTTACTTTATCAAAAACAAAGAAGAAAGGAAGGGACCACAAGAAATCAATGGTGGAATTGATCAGGCAGGCTGTGGAACATTACAACTCAGTTTTTGTTTTCACTGTTGAGAACATGAGAAACCTTAAGTTCAAGGAACTCAGGGAGCAGCTGAAGTCCACTAGCAGATTGTTTTTTGGAGCAAACAAAGTTATGCAAGTTTCTCTTGGGCGAAGTGCTTCCGATGAGATTCAACCAGGCCTTCACAAGGTTTCTAAGCTTTTGCATGGAAATACTGGAATTTGCTTCACAAACTTGCCAAAAGAAGAGGTTGAGAGGTTATTTAAAGAGTATGAGGATTATGATTATGCAAGGACTGGAAGTGCAGCCTCAGAAAAGGTTGAGCTTAAGGAAGGTCCCCTAGAGCAGTTTAGCCATGAGATGGAGCCTTCTCTACGGAAGCTTGGGTTGCCTGTTCGTTTGAATAAGGGTGTGGTGGAGCTTGTATCAGACTTCGTTGTATGCGAGGAGGGAAAGTCTCTATCACCGGAGTCAGCTGGAATACTGCGTGCTCTAGGGATAAGGATGGCAACTTTTCGGCTGAATTTGGTTTGCAGATGGAGCCCCGGTGACTTTGAACTTTACATTGATGGACCAGATAATTCTGATGTTGAATCTGCCTAA

Protein sequence

MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNSDVESA

Homology

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BLAST of PI0008934 vs. ExPASy Swiss-Prot
Match: A4FV84 (mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRTO4 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.5e-56
Identity = 116/230 (50.43%), Postives = 154/230 (66.96%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRD+ V+L+KT KKG + K++++E +R+ V+ Y  +F+F+V NMRN K K++R   
Sbjct: 1   MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           K  SR+FFG NKVM V+LGRS SDE +  LH+VSK L G  G+ FTN  KEEV+  F +Y
Sbjct: 61  KH-SRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVDEWFTKY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            + DYAR G+ A+  V L  GPLEQF H MEP LR+LGLP  L KGVV L+SD+ VC+EG
Sbjct: 121 TEMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRW--SPGDFELYIDGPDNSDVES 229
             L+PE A +L+  G  MA F++++   W    G F+   D    S  ES
Sbjct: 181 DVLTPEQARVLKLFGYEMAEFKVSIKYMWDAQSGRFQQMGDDLPESAPES 229

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BLAST of PI0008934 vs. ExPASy Swiss-Prot
Match: Q9UKD2 (mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=MRTO4 PE=1 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 3.2e-55
Identity = 115/230 (50.00%), Postives = 152/230 (66.09%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRD+ V+L+KT KKG + K++++E +R+ V+ Y  +F+F+V NMRN K K++R   
Sbjct: 1   MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           K  SR+FFG NKVM V+LGRS SDE +  LH+VSK L G  G+ FTN  KEEV   F +Y
Sbjct: 61  KH-SRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            + DYAR G+ A+  V L  GPLEQF H MEP LR+LGLP  L +GVV L+SD+ VC+EG
Sbjct: 121 TEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRW--SPGDFELYIDGPDNSDVES 229
             L+PE A +L+  G  MA F++ +   W    G F+   D    S  ES
Sbjct: 181 DVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPESASES 229

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BLAST of PI0008934 vs. ExPASy Swiss-Prot
Match: Q9D0I8 (mRNA turnover protein 4 homolog OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-54
Identity = 115/230 (50.00%), Postives = 152/230 (66.09%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRD+ V+L+KT KKG + K++++E +R+ V+ Y  +F+F+V NMRN K K++R   
Sbjct: 1   MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           K  SR+FFG NKVM V+LGRS SDE +  LH+VSK L G  G+ FTN  KEEV   F +Y
Sbjct: 61  KH-SRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            + D+AR G+ A+  V L  GPL+QF H MEP LR+LGLP  L KGVV L+SD+ VC+EG
Sbjct: 121 TEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRW--SPGDFELYIDGPDNSDVES 229
             L+PE A IL+  G  MA F++ +   W    G F+   D    S  ES
Sbjct: 181 DVLTPEQARILKLFGYEMAEFKVIIKYMWDAQSGRFQQMDDDLPESAPES 229

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BLAST of PI0008934 vs. ExPASy Swiss-Prot
Match: Q86HD3 (Ribosome assembly factor mrt4 OS=Dictyostelium discoideum OX=44689 GN=mrt4 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-40
Identity = 83/216 (38.43%), Postives = 132/216 (61.11%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           M KSKR+  V ++K  K   + KK +V  I+  V+ Y  +++FT ENMRN K K +R + 
Sbjct: 1   MVKSKRNVVVNMTKVTKNPGEKKKKLVSTIKDIVDQYKFIYLFTFENMRNNKLKSVRTEW 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
            STS+  FG NKV+ V LG+S  DE++P LHK+++ L G  G+ FTN PK++V   F  Y
Sbjct: 61  -STSKFLFGKNKVLSVGLGKSEEDELKPNLHKLTEHLEGECGLFFTNEPKDKVFEYFTNY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            + D+ R+G  + E + +KEGP+   +H ME  LR LGLP  L  GV+ +  ++ +CE G
Sbjct: 121 SEKDFPRSGFVSEETITIKEGPIVGMTHSMETYLRGLGLPTTLKNGVIFVDREYTLCEAG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFEL 217
            +++PE + +L+     ++ F+ ++   W+  +F L
Sbjct: 181 VAVTPEQSQLLKLFNHEISEFKFHIKGFWNEDEFTL 215

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BLAST of PI0008934 vs. ExPASy Swiss-Prot
Match: Q7S302 (Ribosome assembly factor mrt4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mrt4 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 83/234 (35.47%), Postives = 129/234 (55.13%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKR +   L++  KK R+ K+ + E IR+ + +Y   FVF+++NMRN   K++R++L
Sbjct: 1   MPKSKRAKVYNLTQVTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKEL 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
            +  R+FFG  K+   +LG +  D    GL K+SK L G+ G+ FTN    E++  F   
Sbjct: 61  -NDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNL 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQ------------FSHEMEPSLRKLGLPVRLNKGVV 180
              D+AR GS A+  + +  GPL               SH +EP LR+LG+P R+ KG V
Sbjct: 121 TQVDFARAGSVATRTITIPSGPLYSTGGEVPAEHDVPVSHTLEPELRRLGMPTRMVKGKV 180

Query: 181 EL------VSDFVVCEEGKSLSPESAGILRALGIRMATFRLNLVCRWSPGDFEL 217
            L        D+V+C+EG++L      +L+   I ++ FR+ L+  WS    E+
Sbjct: 181 CLGDEAGEGDDYVICKEGETLDSRQTRLLKLFSICLSEFRVKLLAYWSAASGEV 233

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BLAST of PI0008934 vs. ExPASy TrEMBL
Match: A0A6J1F4Z2 (Ribosome assembly factor mrt4 OS=Cucurbita moschata OX=3662 GN=LOC111440919 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116
Identity = 212/229 (92.58%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+LIRQAVE+YNS++VFTVENMRNLKFKELREQL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           KS+SRLFFGANKVMQVSLGR+ASDEIQPGL+KVSKLLHGNTG+CFTNLPKEEVERLF EY
Sbjct: 61  KSSSRLFFGANKVMQVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNSDVESA 230
           KSLSPESAGILRALGIRMATFRLNLVCRWSPG+FELYIDGPDNSD+E+A
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 229

[Close]

BLAST of PI0008934 vs. ExPASy TrEMBL
Match: A0A6J1DT71 (Ribosome assembly factor mrt4 OS=Momordica charantia OX=3673 GN=LOC111024162 PE=3 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.4e-116
Identity = 210/229 (91.70%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+LIRQAVE+YNS++VFTVENMRNLKFKELREQL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           KSTSRLFFGANKVMQVSLGR+ SDEI+PGLHK+SKLLHGNTG+CFTNLPKEEVERLF EY
Sbjct: 61  KSTSRLFFGANKVMQVSLGRTVSDEIRPGLHKISKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
           EDYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EDYDYARTGSTATEKVELKEGPLEQFSHEMEPSLRKLGMPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNSDVESA 230
           K+LSPESAGILRALGIRMA+FRLNLVCRWSPGDF+LYI+G DNSDVESA
Sbjct: 181 KALSPESAGILRALGIRMASFRLNLVCRWSPGDFQLYIEGLDNSDVESA 229

[Close]

BLAST of PI0008934 vs. ExPASy TrEMBL
Match: A0A6J1I1E2 (Ribosome assembly factor mrt4 OS=Cucurbita maxima OX=3661 GN=LOC111468997 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.8e-116
Identity = 211/229 (92.14%), Postives = 224/229 (97.82%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+LIRQAVE+YNS++VFTVENMRNLKFKELREQL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           KS+SRLFFGANKVMQVSLGR+ASDEIQPGL+KVSKLLHGNTG+CFTNLPKEEVERLF EY
Sbjct: 61  KSSSRLFFGANKVMQVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNSDVESA 230
           KSLSPESAGILRALGIRMATFRLNLVCRWSPG+FELYIDGPD SD+E+A
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDYSDIETA 229

[Close]

BLAST of PI0008934 vs. ExPASy TrEMBL
Match: A0A0A0LM77 (Ribosome assembly factor mrt4 OS=Cucumis sativus OX=3659 GN=Csa_2G302060 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.9e-99
Identity = 189/207 (91.30%), Postives = 196/207 (94.69%), Query Frame = 0


Query: 26  MVELIRQAVEHYNSVFVFTVENMRNLKFKELREQLKSTSR---LFFGANKVMQVSLGRSA 85
           MVELIRQAVE+YNSVFVFTVENMRNLKFKELREQLKSTSR   L   +NKVMQ+SLGRS 
Sbjct: 1   MVELIRQAVENYNSVFVFTVENMRNLKFKELREQLKSTSRQVLLPDFSNKVMQISLGRSD 60

Query: 86  SDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEYEDYDYARTGSAASEKVELKEGP 145
           SDEI+PGLHKVSKLLHGNTG+CFTNLPKEEVERLF EYEDYDYARTGSAASEKVELKEGP
Sbjct: 61  SDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEYEDYDYARTGSAASEKVELKEGP 120

Query: 146 LEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFR 205
           L QFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALG+R A FR
Sbjct: 121 LGQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGLRTAIFR 180

Query: 206 LNLVCRWSPGDFELYIDGPDNSDVESA 230
           LNLVCRWSPGDFELYIDGP+NSDVESA
Sbjct: 181 LNLVCRWSPGDFELYIDGPENSDVESA 207

[Close]

BLAST of PI0008934 vs. ExPASy TrEMBL
Match: A0A6P4AGB2 (Ribosome assembly factor mrt4 OS=Ziziphus jujuba OX=326968 GN=LOC107427781 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.2e-98
Identity = 178/229 (77.73%), Postives = 207/229 (90.39%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR+HK+++V  IRQAVE Y+S++VF  ENMRNLKFKE RE++
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKEAIVNAIRQAVEDYSSIYVFKFENMRNLKFKEFREKM 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           KSTSR F G+NKVMQVSLGRSA+DE++PG++KVSKLL G+ G+CFTNL KEEVERLF EY
Sbjct: 61  KSTSRFFLGSNKVMQVSLGRSAADEMRPGIYKVSKLLRGDAGLCFTNLAKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
           EDYD+ RTGS A+EKVELKEGPL+QFSHEMEP LRK G+PVRLNKGVVELV+D+VVCEEG
Sbjct: 121 EDYDFGRTGSIATEKVELKEGPLDQFSHEMEPFLRKQGMPVRLNKGVVELVADYVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNSDVESA 230
           K LSPE+A ILR LGI+MATFRL+L+CRWSP DFELYID P +SDVES+
Sbjct: 181 KPLSPEAARILRLLGIKMATFRLHLICRWSPSDFELYIDAPGDSDVESS 229

[Close]

BLAST of PI0008934 vs. NCBI nr
Match: XP_038902849.1 (mRNA turnover protein 4 homolog [Benincasa hispida])

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-118
Identity = 218/229 (95.20%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMVELIRQAVE+YNS+FVFTVENMRNLKFKELREQL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVELIRQAVENYNSIFVFTVENMRNLKFKELREQL 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           KS+SRLFFGANKVMQVSLGRSAS+EI+PGLHKVSKLLHGNTG+CFTNLPKEEVERLF EY
Sbjct: 61  KSSSRLFFGANKVMQVSLGRSASNEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            DYDYARTGSAA+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 VDYDYARTGSAATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNSDVESA 230
           KSLSPESAGILRALGIRMATFRL+LVCRWSPGDFELYIDGPDNSDVESA
Sbjct: 181 KSLSPESAGILRALGIRMATFRLHLVCRWSPGDFELYIDGPDNSDVESA 229

[Close]

BLAST of PI0008934 vs. NCBI nr
Match: XP_011649395.1 (mRNA turnover protein 4 homolog [Cucumis sativus] >KAE8651976.1 hypothetical protein Csa_005993 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 4.4e-118
Identity = 218/229 (95.20%), Postives = 224/229 (97.82%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVE+YNSVFVFTVENMRNLKFKELREQL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVENYNSVFVFTVENMRNLKFKELREQL 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           KSTSRLFFGANKVMQ+SLGRS SDEI+PGLHKVSKLLHGNTG+CFTNLPKEEVERLF EY
Sbjct: 61  KSTSRLFFGANKVMQISLGRSDSDEIRPGLHKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
           EDYDYARTGSAASEKVELKEGPL QFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EDYDYARTGSAASEKVELKEGPLGQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNSDVESA 230
           KSLSPESAGILRALG+R A FRLNLVCRWSPGDFELYIDGP+NSDVESA
Sbjct: 181 KSLSPESAGILRALGLRTAIFRLNLVCRWSPGDFELYIDGPENSDVESA 229

[Close]

BLAST of PI0008934 vs. NCBI nr
Match: XP_022933518.1 (mRNA turnover protein 4 homolog [Cucurbita moschata] >KAG6588508.1 mRNA turnover protein 4-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 429.1 bits (1102), Expect = 2.4e-116
Identity = 212/229 (92.58%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+LIRQAVE+YNS++VFTVENMRNLKFKELREQL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           KS+SRLFFGANKVMQVSLGR+ASDEIQPGL+KVSKLLHGNTG+CFTNLPKEEVERLF EY
Sbjct: 61  KSSSRLFFGANKVMQVSLGRTASDEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNSDVESA 230
           KSLSPESAGILRALGIRMATFRLNLVCRWSPG+FELYIDGPDNSD+E+A
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 229

[Close]

BLAST of PI0008934 vs. NCBI nr
Match: XP_023529350.1 (mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.6 bits (1098), Expect = 7.0e-116
Identity = 211/229 (92.14%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+LIRQAVE+YNS++VFTVENMRNLKFKELREQL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           KS+SRLFFGANKVMQVSLGR+AS+EIQPGL+KVSKLLHGNTG+CFTNLPKEEVERLF EY
Sbjct: 61  KSSSRLFFGANKVMQVSLGRTASEEIQPGLYKVSKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
            DYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDF VCEEG
Sbjct: 121 VDYDYARTGSEATEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFTVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNSDVESA 230
           KSLSPESAGILRALGIRMATFRLNLVCRWSPG+FELYIDGPDNSD+E+A
Sbjct: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGEFELYIDGPDNSDIETA 229

[Close]

BLAST of PI0008934 vs. NCBI nr
Match: XP_022157470.1 (mRNA turnover protein 4 homolog [Momordica charantia])

HSP 1 Score: 427.2 bits (1097), Expect = 9.1e-116
Identity = 210/229 (91.70%), Postives = 225/229 (98.25%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR+HKKSMV+LIRQAVE+YNS++VFTVENMRNLKFKELREQL
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKKSMVDLIRQAVENYNSIYVFTVENMRNLKFKELREQL 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           KSTSRLFFGANKVMQVSLGR+ SDEI+PGLHK+SKLLHGNTG+CFTNLPKEEVERLF EY
Sbjct: 61  KSTSRLFFGANKVMQVSLGRTVSDEIRPGLHKISKLLHGNTGLCFTNLPKEEVERLFNEY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
           EDYDYARTGS A+EKVELKEGPLEQFSHEMEPSLRKLG+PVRLNKGVVELVSDFVVCEEG
Sbjct: 121 EDYDYARTGSTATEKVELKEGPLEQFSHEMEPSLRKLGMPVRLNKGVVELVSDFVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDGPDNSDVESA 230
           K+LSPESAGILRALGIRMA+FRLNLVCRWSPGDF+LYI+G DNSDVESA
Sbjct: 181 KALSPESAGILRALGIRMASFRLNLVCRWSPGDFQLYIEGLDNSDVESA 229

[Close]

BLAST of PI0008934 vs. TAIR 10
Match: AT1G25260.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 317.8 bits (813), Expect = 7.3e-87
Identity = 159/235 (67.66%), Postives = 193/235 (82.13%), Query Frame = 0


Query: 1   MPKSKRDRPVTLSKTKKKGRDHKKSMVELIRQAVEHYNSVFVFTVENMRNLKFKELREQL 60
           MPKSKRDRPVTLSKTKKKGR+HK+ +V  IR+AVE Y+SV+VF+ ENMRN+KFKE R+Q 
Sbjct: 1   MPKSKRDRPVTLSKTKKKGREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQF 60

Query: 61  KSTSRLFFGANKVMQVSLGRSASDEIQPGLHKVSKLLHGNTGICFTNLPKEEVERLFKEY 120
           +   + F G+NKVMQV+LGRSA DE++ G++KVSKLL G+TG+  T++PKEEVE LF  Y
Sbjct: 61  RHNGKFFLGSNKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAY 120

Query: 121 EDYDYARTGSAASEKVELKEGPLEQFSHEMEPSLRKLGLPVRLNKGVVELVSDFVVCEEG 180
           ED D++RTGS A E VELKEGPLEQF+HEMEP LRKL +PVRLNKG VELV+DFVVCEEG
Sbjct: 121 EDSDFSRTGSIAVETVELKEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEG 180

Query: 181 KSLSPESAGILRALGIRMATFRLNLVCRWSPGDFELYIDG------PDNSDVESA 230
           K LSP+SA ILR L ++MATF+LNL+CRWSP DFELY +        D SDVE++
Sbjct: 181 KQLSPKSAHILRLLRMKMATFKLNLLCRWSPSDFELYREDLSELYREDLSDVETS 235

[Close]

BLAST of PI0008934 vs. TAIR 10
Match: AT3G11250.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.6e-12
Identity = 44/176 (25.00%), Postives = 86/176 (48.86%), Query Frame = 0


Query: 32  QAVEHYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQVSLGRSASDEIQPGLH 91
           Q ++ Y  + V   +N+ + + + +R+ L+  S +  G N +M+ S+   + +     + 
Sbjct: 19  QLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENSGNTAIL 78

Query: 92  KVSKLLHGNTGICFTNLPKEEVERLFKEYEDYDYARTGSAASEKVELKEGPLEQFSHEME 151
            +  LL GN G+ FT    +EV     +Y+    AR G  A   V ++ G     +  ++
Sbjct: 79  NLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPG-----NTGLD 138

Query: 152 PS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL 204
           PS     + L +P ++NKG VE+++   + ++G  +    A +L  LGIR  ++ L
Sbjct: 139 PSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGL 189

[Close]

BLAST of PI0008934 vs. TAIR 10
Match: AT3G09200.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.4e-12
Identity = 44/176 (25.00%), Postives = 86/176 (48.86%), Query Frame = 0


Query: 32  QAVEHYNSVFVFTVENMRNLKFKELREQLKSTSRLFFGANKVMQVSLGRSASDEIQPGLH 91
           Q ++ Y  + V   +N+ + + + +R+ L+  S +  G N +M+ S+   + +     + 
Sbjct: 19  QLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHSENTGNTAIL 78

Query: 92  KVSKLLHGNTGICFTNLPKEEVERLFKEYEDYDYARTGSAASEKVELKEGPLEQFSHEME 151
            +  LL GN G+ FT    +EV     +Y+    AR G  A   V ++ G     +  ++
Sbjct: 79  NLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPG-----NTGLD 138

Query: 152 PS----LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL 204
           PS     + L +P ++NKG VE+++   + ++G  +    A +L  LGIR  ++ L
Sbjct: 139 PSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGL 189

[Close]

BLAST of PI0008934 vs. TAIR 10
Match: AT3G09200.2 (Ribosomal protein L10 family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06
Identity = 33/112 (29.46%), Postives = 56/112 (50.00%), Query Frame = 0


Query: 96  LLHGNTGICFTNLPKEEVERLFKEYEDYDYARTGSAASEKVELKEGPLEQFSHEMEPS-- 155
           LL GN G+ FT    +EV     +Y+    AR G  A   V ++ G     +  ++PS  
Sbjct: 50  LLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPG-----NTGLDPSQT 109

Query: 156 --LRKLGLPVRLNKGVVELVSDFVVCEEGKSLSPESAGILRALGIRMATFRL 204
              + L +P ++NKG VE+++   + ++G  +    A +L  LGIR  ++ L
Sbjct: 110 SFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGL 156

The following BLAST results are available for this feature:

BLAST of PI0008934 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4FV84	6.5e-56	50.43	mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRTO4 PE=2 SV=1	[more]
Q9UKD2	3.2e-55	50.00	mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=MRTO4 PE=1 SV=2	[more]
Q9D0I8	1.6e-54	50.00	mRNA turnover protein 4 homolog OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=1	[more]
Q86HD3	1.3e-40	38.43	Ribosome assembly factor mrt4 OS=Dictyostelium discoideum OX=44689 GN=mrt4 PE=3 ...	[more]
Q7S302	1.1e-34	35.47	Ribosome assembly factor mrt4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-...	[more]

BLAST of PI0008934 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4Z2	1.2e-116	92.58	Ribosome assembly factor mrt4 OS=Cucurbita moschata OX=3662 GN=LOC111440919 PE=3...	[more]
A0A6J1DT71	4.4e-116	91.70	Ribosome assembly factor mrt4 OS=Momordica charantia OX=3673 GN=LOC111024162 PE=...	[more]
A0A6J1I1E2	9.8e-116	92.14	Ribosome assembly factor mrt4 OS=Cucurbita maxima OX=3661 GN=LOC111468997 PE=3 S...	[more]
A0A0A0LM77	2.9e-99	91.30	Ribosome assembly factor mrt4 OS=Cucumis sativus OX=3659 GN=Csa_2G302060 PE=3 SV...	[more]
A0A6P4AGB2	3.2e-98	77.73	Ribosome assembly factor mrt4 OS=Ziziphus jujuba OX=326968 GN=LOC107427781 PE=3 ...	[more]

BLAST of PI0008934 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902849.1	2.0e-118	95.20	mRNA turnover protein 4 homolog [Benincasa hispida]	[more]
XP_011649395.1	4.4e-118	95.20	mRNA turnover protein 4 homolog [Cucumis sativus] >KAE8651976.1 hypothetical pro...	[more]
XP_022933518.1	2.4e-116	92.58	mRNA turnover protein 4 homolog [Cucurbita moschata] >KAG6588508.1 mRNA turnover...	[more]
XP_023529350.1	7.0e-116	92.14	mRNA turnover protein 4 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022157470.1	9.1e-116	91.70	mRNA turnover protein 4 homolog [Momordica charantia]	[more]

BLAST of PI0008934 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25260.1	7.3e-87	67.66	Ribosomal protein L10 family protein	[more]
AT3G11250.1	2.6e-12	25.00	Ribosomal protein L10 family protein	[more]
AT3G09200.1	3.4e-12	25.00	Ribosomal protein L10 family protein	[more]
AT3G09200.2	1.3e-06	29.46	Ribosomal protein L10 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 19..120 e-value: 6.2E-19 score: 68.0
IPR043164	50S ribosomal protein L10, insertion domain superfamily	GENE3D	3.90.105.20		coord: 125..198 e-value: 8.8E-70 score: 236.0
IPR040637	60S ribosomal protein L10P, insertion domain	PFAM	PF17777	RL10P_insert	coord: 126..196 e-value: 1.1E-22 score: 79.8
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 30..210 e-value: 8.8E-70 score: 236.0
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 20..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR45841	MRNA TURNOVER PROTEIN 4 MRTO4	coord: 1..228
None	No IPR available	PANTHER	PTHR45841:SF4	RIBOSOME ASSEMBLY FACTOR MRT4	coord: 1..228
IPR033867	Ribosome assembly factor Mrt4	CDD	cd05796	Ribosomal_P0_like	coord: 21..184 e-value: 5.08992E-85 score: 247.877

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008934.1	PI0008934.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000956	nuclear-transcribed mRNA catabolic process
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor