PI0008926 (gene) Melon (PI 482460) v1

Overview


Name	PI0008926
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	zinc finger protein CONSTANS-LIKE 1 isoform X2
Location	chr11: 6297926 .. 6300873 (+)
RNA-Seq Expression	PI0008926
Synteny	PI0008926

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGAGCTTCCTCTTCTCTCTCTCTCTAACACGTCTCTTCTGATCGGAGCTCCTTCGTATTTCTCACACGCCGCCGTTCCTCTGATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCACCGAACTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCTCTAAAAATCCGTCCATCAACTAACAATTTTTTATTACATCGATCTTTTCCCCTCCTTAATCCTACTTCTCTTCAATCCAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTGTCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGGTGAGACGAATAAAATTAACCAATGCGACTGAAAAAATTGTGTTGGTCTATTTGGTGAGACCAACACAATTTTTTTTAGAAAAATTAAAATTATGGATTCATATACATTCAAAGATTTGGGAAAAGGACGTCGTAATGTGATGATCATATGTATCGAATAAGTTTTGGTTGGATATTAGATTCAAGCTCAATGCACTCTGCAAGGGTCGACATTGAATAATTCTTATGGAAAATAAAATTATATGTAGAAGTGTATCGGTCTTTTATCAATATCATGATATTAAGTTTATTTATAGATCTGAAATTTTTTATATTTAGTAAATATTTGGTTTATTTTTACCATATAGCTTAGCTTTTATATGAGTGATTAAAATAAAATAATTGTTACTTTATTTGAATAATTTATGCCATTAATGGAAGCTACTACAATCATGGTCAACTTAATTCCATGCAAAGGATCATTAAAAAAAATGGCTTTTCATGAATCCAAAGAGTTTGTTTTATTATTACTTTTTAAAAAGGGGTCTTGAGTATAATATTTAAATGAATGAGATTAAAAGTAACATATACTATACTATTATTAAGACAGACGAGTAATAAAAATATTCTATAGTTTGTGGCTTGACAAACATTGATGGAATAATAACATATTAAGTTGTATAAAGATAATGTGTAAGTATTTATGAATGTATGAAATTGGGTTTTGTTTTGAATGATTATATTGAAATAATGAGATTGAGAAAATGGTGCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGTGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATACAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGGTTTCTTTTCTTTTCTTTTTTCTCATATTATATTCTTCTTTATCTATCTTAATTATATAAATGAATTAATTCTTGTAGAATAAATCATAATTTCACCTCTTATTCTACTATCTACATATTATTTCATAGATTATTCTAGATGCCAACAACTATATATTTATATATATCAACTAATATAATTATACTATTTCAATTTCATTTAACCTAAATTTAATATATACTTTTTTTGTTATTTCAATTTCATCTTGATCTTTTTGCTTTTGTCACATCTAACTTATATGAGAAACCCCAAAATACCTTCTTTTTTTTTTTTTTTTATATAAATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTTAAGGTTTGAAAGGTCATTTCATTATTTAGAAGAGGGTAGCAATGGAAAAGACAGATTTTTAAAAACCATCCCAAAAATGGGTCCAAAAGCCAATTAAACAATATTTCATTCAATCAAAATCCTAGATGTGATATTTTTAGGTCCTTTTTTTTTAAAAAAAATTCTAATAAATTCACAAGTAAATGAATCTCTTTTTGTAGGTTATACTCACTAATATTATGTGGTTGGGTGTTGGTTAAAGTATGCTTGTAGGAAGTCATTAGCGGATAGTCGACCACGGATTAGAGGACGATTCGCGAGGTACAACGATGAGATAGTGAAGAATTATCCAGCGCAATGGAGTCAGGAAGGAGAGGAAGAAGAAGAACAAGGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATGCATATTCCGCGAACCTTATTCCATGAATCTCACACAACAACTAAATAATGTAGTTGTAGTCTAGTGTCATTCGGCCTCTTCCATTTTGACCTGCCTTTCAATTACGTGAGAATTTTATATCTACTTATTTTAGCTTCTTTTCTCTTTGTATGAAATATTATATCATAGTGTTATATATATATATATATATATATATATATATATATATAAATAATAATGATGTCATTTGGGTTGTGAATATGAGGATTGAGGGGGTTTTTTTAAGCAGTGATTAGGTACAGCTTAAGTTGTACCTAATCTTATACTTTAATCCTCATCTCCTTTTGCACACAAATATTTTTAAAAAAGAACATTAAAAATGTTATATAATATAATTAAATTTGATTTTATCAACTAGCTTAAGCTTTTGGGTCTATTTGCTATTTAAAAGGGTATCATAGCATTGTGGTCAAGATGTCTTTTGTTTGATCCCTTGGAATCCCCATTTAATATTCATTTTCATTTGTTGGGTATCTCACATATTTCAATCCCACAAAATGAGTGAGACTGTTAGATTATATTAAATTTGTCTATACCCACTACCTTAATCTTTTTGCTTGGAACTAAGTTGGATTGCACAATTTTTTTTCTAGGGCAGTTACATTAAGGATGACATTTTTAAAGAATTCCAAATATAGTAAAATCTTACCCTTATTGTTGATGTACTCTTTCAAGCGATATATAATCTATCATAATAGATTCCAACAATGTACATATTTGCTAATATTTTGGATTAGATTATTA

mRNA sequence

CTCGAGCTTCCTCTTCTCTCTCTCTCTAACACGTCTCTTCTGATCGGAGCTCCTTCGTATTTCTCACACGCCGCCGTTCCTCTGATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCACCGAACTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCTCTAAAAATCCGTCCATCAACTAACAATTTTTTATTACATCGATCTTTTCCCCTCCTTAATCCTACTTCTCTTCAATCCAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTGTCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGTGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATACAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCATTAGCGGATAGTCGACCACGGATTAGAGGACGATTCGCGAGGTACAACGATGAGATAGTGAAGAATTATCCAGCGCAATGGAGTCAGGAAGGAGAGGAAGAAGAAGAACAAGGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATGCATATTCCGCGAACCTTATTCCATGAATCTCACACAACAACTAAATAATGTAGTTGTAGTCTAGTGTCATTCGGCCTCTTCCATTTTGACCTGCCTTTCAATTACGTGAGAATTTTATATCTACTTATTTTAGCTTCTTTTCTCTTTGTATGAAATATTATATCATAGTGTTATATATATATATATATATATATATATATATATATATAAATAATAATGATGTCATTTGGGTTGTGAATATGAGGATTGAGGGGGTTTTTTTAAGCAGTGATTAGGTACAGCTTAAGTTGTACCTAATCTTATACTTTAATCCTCATCTCCTTTTGCACACAAATATTTTTAAAAAAGAACATTAAAAATGTTATATAATATAATTAAATTTGATTTTATCAACTAGCTTAAGCTTTTGGGTCTATTTGCTATTTAAAAGGGTATCATAGCATTGTGGTCAAGATGTCTTTTGTTTGATCCCTTGGAATCCCCATTTAATATTCATTTTCATTTGTTGGGTATCTCACATATTTCAATCCCACAAAATGAGTGAGACTGTTAGATTATATTAAATTTGTCTATACCCACTACCTTAATCTTTTTGCTTGGAACTAAGTTGGATTGCACAATTTTTTTTCTAGGGCAGTTACATTAAGGATGACATTTTTAAAGAATTCCAAATATAGTAAAATCTTACCCTTATTGTTGATGTACTCTTTCAAGCGATATATAATCTATCATAATAGATTCCAACAATGTACATATTTGCTAATATTTTGGATTAGATTATTA

Coding sequence (CDS)

ATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCACCGAACTCGCAGGCGTTGATTTTGACTGGTTGCCCGATTCTTCCATTAAGCTTTGGAATTCTGAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCGGAACCTCTAAAAATCCGTCCATCAACTAACAATTTTTTATTACATCGATCTTTTCCCCTCCTTAATCCTACTTCTCTTCAATCCAATGATTCATTTCTTCAACGCACTTTTTCTTCCTCGTCGCCACCGCCTTCTGCCGCCATCGATCCTCCTGTCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGAAGAAGAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGTGAAAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGAATTGAAAGATACAGAACCAAAAGAAACCAAAGGAACTTCAACAAGAAGATTAAGTATGCTTGTAGGAAGTCATTAGCGGATAGTCGACCACGGATTAGAGGACGATTCGCGAGGTACAACGATGAGATAGTGAAGAATTATCCAGCGCAATGGAGTCAGGAAGGAGAGGAAGAAGAAGAACAAGGAGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATTGATGCATATTCCGCGAACCTTATTCCATGA

Protein sequence

MAFSPFLSAASHSSTELAGVDFDWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIRPSTNNFLLHRSFPLLNPTSLQSNDSFLQRTFSSSSPPPSAAIDPPVNRPLFPAGDFQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEIVKNYPAQWSQEGEEEEEQGEANSCGDNWIKYFIDAYSANLIP

Homology

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BLAST of PI0008926 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 141 ACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 194
           A + SP E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 221 AVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273

[Close]

BLAST of PI0008926 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-06
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 137 GMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 194
           G  RA   +  E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 283 GTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 339

[Close]

BLAST of PI0008926 vs. ExPASy Swiss-Prot
Match: Q9LKL2 (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=APRR1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.3e-06
Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 0


Query: 147 EEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEI---VKNYP--A 206
           + ++E + ++R KRNQR F+KKI+Y  RK LA+ RPR++G+F R  + +   +   P  A
Sbjct: 531 DRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQPDSA 590

Query: 207 QWSQEGEEEEEQGEAN 218
            +  E EEEEE+ E N
Sbjct: 591 DYDDEEEEEEEEEEEN 606

[Close]

BLAST of PI0008926 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.3e-06
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 145 SPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 194
           SP +++ R+ RYR K+  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKD 330

[Close]

BLAST of PI0008926 vs. ExPASy Swiss-Prot
Match: Q9FDX8 (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 35/103 (33.98%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 93  PPSAAIDPPVNRPLFPAGDFQKKNNNERGDESPVSCESSITIIEG--MSRACRYSPEEKK 152
           P S  ID P +R L PAG                    +I +  G  +  +  +S  +++
Sbjct: 288 PDSTVIDMPNSRILTPAG--------------------AINLFSGPSLQMSLHFSSMDRE 347

Query: 153 ERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYND 194
            R+ RYR K+  R F K I+Y  RK+ A++RPRI+GRFA+ +D
Sbjct: 348 ARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSD 370

[Close]

BLAST of PI0008926 vs. ExPASy TrEMBL
Match: A0A1S3CK56 (zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.7e-118
Identity = 219/240 (91.25%), Postives = 228/240 (95.00%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSTELAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSS ++AGVDFD WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKI PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHRSFPLLNPTSLQS-NDSFLQRTFSSS-SPPPSAAIDPPVNRPLFPAGDFQKKNN 120
           NNFLLH+SFPLLN  SLQS NDSFLQRTFSSS SPPPSAAIDPP+NRPLFPAGDFQKKNN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNN 120

Query: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL 180
           NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL
Sbjct: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL 180

Query: 181 ADSRPRIRGRFARYNDEIVKNYPAQWSQEGEEEEEQGEANSCGDNWIKYFIDAYSANLIP 238
           ADSRPRIRGRFARYNDE+VKNYP QW+ + EEE++Q EANSCGDNWIKYFID YSANLIP
Sbjct: 181 ADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLIP 240

[Close]

BLAST of PI0008926 vs. ExPASy TrEMBL
Match: A0A5D3CRZ2 (Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001070 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 9.2e-117
Identity = 219/241 (90.87%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSTELAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSS ++AGVDFD WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKI PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHRSFPLLNPTSLQS-NDSFLQRTFSSS-SPPPSAAIDPPVNRPLFPAGDF-QKKN 120
           NNFLLH+SFPLLN  SLQS NDSFLQRTFSSS SPPPSAAIDPP+NRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEIVKNYPAQWSQEGEEEEEQGEANSCGDNWIKYFIDAYSANLI 238
           LADSRPRIRGRFARYNDE+VKNYP QW+ + EEE++Q EANSCGDNWIKYFID YSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of PI0008926 vs. ExPASy TrEMBL
Match: A0A1S3CK62 (zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 9.2e-117
Identity = 219/241 (90.87%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSTELAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSS ++AGVDFD WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKI PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHRSFPLLNPTSLQS-NDSFLQRTFSSS-SPPPSAAIDPPVNRPLFPAGDF-QKKN 120
           NNFLLH+SFPLLN  SLQS NDSFLQRTFSSS SPPPSAAIDPP+NRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEIVKNYPAQWSQEGEEEEEQGEANSCGDNWIKYFIDAYSANLI 238
           LADSRPRIRGRFARYNDE+VKNYP QW+ + EEE++Q EANSCGDNWIKYFID YSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of PI0008926 vs. ExPASy TrEMBL
Match: A0A0A0KG14 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.6e-116
Identity = 221/246 (89.84%), Postives = 228/246 (92.68%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSTELAGVDFDWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSS +LAGVDFDWLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKIRPST
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST 60

Query: 61  NNFLLHRS-FPLLNPTSLQSN--DSFLQRTFSSSSPPPSAAIDPPVNRPLFPAGDFQKK- 120
           NNFLLH S FPLLNP SLQSN  DSFLQRTFSSSSPPPSAAIDPP+NRPLFP GDFQKK 
Sbjct: 61  NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSAAIDPPINRPLFPVGDFQKKN 120

Query: 121 NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRK 180
           NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYACRK
Sbjct: 121 NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRK 180

Query: 181 SLADSRPRIRGRFARYNDEIVKNYPAQWSQ----EGEEEEEQGEANSCGDNWIKYFIDAY 238
           SLADSRPRIRGRFARYNDE+VKNYP QW+Q    E EEEE+Q EANSCGDNWIKYFID Y
Sbjct: 181 SLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFIDTY 240

[Close]

BLAST of PI0008926 vs. ExPASy TrEMBL
Match: A0A5A7SW55 (Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00610 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.9e-94
Identity = 188/241 (78.01%), Postives = 197/241 (81.74%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSTELAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSS ++AGVDFD WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKI PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHRSFPLLNPTSLQS-NDSFLQRTFSSS-SPPPSAAIDPPVNRPLFPAGDF-QKKN 120
           NNFLLH+SFPLLN  SLQS NDSFLQRTFSSS SPPPSAAIDPP+NRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSR                               ACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSR-------------------------------ACRKS 180

Query: 181 LADSRPRIRGRFARYNDEIVKNYPAQWSQEGEEEEEQGEANSCGDNWIKYFIDAYSANLI 238
           LADSRPRIRGRFARYNDE+VKNYP QW+ + EEE++Q EANSCGDNWIKYFID YSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 210

[Close]

BLAST of PI0008926 vs. NCBI nr
Match: XP_008463853.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 434.1 bits (1115), Expect = 7.7e-118
Identity = 219/240 (91.25%), Postives = 228/240 (95.00%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSTELAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSS ++AGVDFD WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKI PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHRSFPLLNPTSLQS-NDSFLQRTFSSS-SPPPSAAIDPPVNRPLFPAGDFQKKNN 120
           NNFLLH+SFPLLN  SLQS NDSFLQRTFSSS SPPPSAAIDPP+NRPLFPAGDFQKKNN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQKKNN 120

Query: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL 180
           NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL
Sbjct: 121 NERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSL 180

Query: 181 ADSRPRIRGRFARYNDEIVKNYPAQWSQEGEEEEEQGEANSCGDNWIKYFIDAYSANLIP 238
           ADSRPRIRGRFARYNDE+VKNYP QW+ + EEE++Q EANSCGDNWIKYFID YSANLIP
Sbjct: 181 ADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLIP 240

[Close]

BLAST of PI0008926 vs. NCBI nr
Match: XP_008463852.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK14365.1 zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 429.5 bits (1103), Expect = 1.9e-116
Identity = 219/241 (90.87%), Postives = 228/241 (94.61%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSTELAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSS ++AGVDFD WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKI PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHRSFPLLNPTSLQS-NDSFLQRTFSSS-SPPPSAAIDPPVNRPLFPAGDF-QKKN 120
           NNFLLH+SFPLLN  SLQS NDSFLQRTFSSS SPPPSAAIDPP+NRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180

Query: 181 LADSRPRIRGRFARYNDEIVKNYPAQWSQEGEEEEEQGEANSCGDNWIKYFIDAYSANLI 238
           LADSRPRIRGRFARYNDE+VKNYP QW+ + EEE++Q EANSCGDNWIKYFID YSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 240

[Close]

BLAST of PI0008926 vs. NCBI nr
Match: XP_011657240.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical protein Csa_023060 [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 9.4e-116
Identity = 221/246 (89.84%), Postives = 228/246 (92.68%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSTELAGVDFDWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSS +LAGVDFDWLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKIRPST
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST 60

Query: 61  NNFLLHRS-FPLLNPTSLQSN--DSFLQRTFSSSSPPPSAAIDPPVNRPLFPAGDFQKK- 120
           NNFLLH S FPLLNP SLQSN  DSFLQRTFSSSSPPPSAAIDPP+NRPLFP GDFQKK 
Sbjct: 61  NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSAAIDPPINRPLFPVGDFQKKN 120

Query: 121 NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRK 180
           NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYACRK
Sbjct: 121 NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRK 180

Query: 181 SLADSRPRIRGRFARYNDEIVKNYPAQWSQ----EGEEEEEQGEANSCGDNWIKYFIDAY 238
           SLADSRPRIRGRFARYNDE+VKNYP QW+Q    E EEEE+Q EANSCGDNWIKYFID Y
Sbjct: 181 SLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFIDTY 240

[Close]

BLAST of PI0008926 vs. NCBI nr
Match: XP_038902180.1 (zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida])

HSP 1 Score: 374.4 bits (960), Expect = 7.3e-100
Identity = 202/242 (83.47%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSTELAGVDFDWLPDSSI-KLWNSEFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSS +LAGVDFDWLPDSSI KLWNSEFSDSCGDGSP SPP+ L IRPS 
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSINKLWNSEFSDSCGDGSPTSPPQSLTIRPSN 60

Query: 61  NNFLLHRSFPLLNPTSLQSNDSFLQRTFSSSSPPPSA----AIDPPVNRPLFPAGDFQKK 120
           NNFLLH+SFP L+P SLQSND FLQRTFSSSSPPPSA    A +  +NRPLFPAGDFQ+ 
Sbjct: 61  NNFLLHQSFPHLDP-SLQSNDLFLQRTFSSSSPPPSASAPTAANRLINRPLFPAGDFQR- 120

Query: 121 NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRK 180
            NN+R  ESPVSCESSIT IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRK
Sbjct: 121 -NNQRA-ESPVSCESSIT-IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRK 180

Query: 181 SLADSRPRIRGRFARYNDEIVKNYPAQWSQEGEEEEEQGEANSCGDNWIKYFIDAYSANL 238
           SLADSRPRIRGRFARYND++VKNYP QWS  G+EEE+  EAN+CGDNWIKYFIDAYS NL
Sbjct: 181 SLADSRPRIRGRFARYNDDVVKNYPMQWS-HGQEEEQ--EANNCGDNWIKYFIDAYSTNL 234

[Close]

BLAST of PI0008926 vs. NCBI nr
Match: KAA0035270.1 (zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 354.8 bits (909), Expect = 6.0e-94
Identity = 188/241 (78.01%), Postives = 197/241 (81.74%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSTELAGVDFD-WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSS ++AGVDFD WLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKI PST
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNSEFSDSCGDGSPPSPPEPLKIHPST 60

Query: 61  NNFLLHRSFPLLNPTSLQS-NDSFLQRTFSSS-SPPPSAAIDPPVNRPLFPAGDF-QKKN 120
           NNFLLH+SFPLLN  SLQS NDSFLQRTFSSS SPPPSAAIDPP+NRPLFPAGDF QKKN
Sbjct: 61  NNFLLHQSFPLLNHDSLQSNNDSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQKKN 120

Query: 121 NNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKS 180
           NNERGDESPVSCESSITIIEGMSR                               ACRKS
Sbjct: 121 NNERGDESPVSCESSITIIEGMSR-------------------------------ACRKS 180

Query: 181 LADSRPRIRGRFARYNDEIVKNYPAQWSQEGEEEEEQGEANSCGDNWIKYFIDAYSANLI 238
           LADSRPRIRGRFARYNDE+VKNYP QW+ + EEE++Q EANSCGDNWIKYFID YSANLI
Sbjct: 181 LADSRPRIRGRFARYNDEVVKNYPVQWNLQREEEQQQREANSCGDNWIKYFIDTYSANLI 210

[Close]

BLAST of PI0008926 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 108.2 bits (269), Expect = 9.0e-24
Identity = 75/136 (55.15%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 99  DPPVNRPLFPAGDFQKKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRT 158
           D PV R L  AGD  +   + R + S V  ES+  IIEGMS+A +YSPEEKKE+IE+YR+
Sbjct: 118 DGPVRRAL-SAGDLPR---SSRRESSTVWSESN-AIIEGMSKAYKYSPEEKKEKIEKYRS 177

Query: 159 KRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEIVKNYPAQWSQEGEEEEEQGEANS 218
           KRN RNFNK+IKY CRK+LADSRPRIRGRFAR NDEI     +Q  Q    E   G+   
Sbjct: 178 KRNLRNFNKRIKYECRKTLADSRPRIRGRFAR-NDEI-----SQQEQVDVMEAVVGDV-- 237

Query: 219 CGDNWIKYFIDAYSAN 235
             D W   F+D++SAN
Sbjct: 238 --DTWAS-FLDSFSAN 237

[Close]

BLAST of PI0008926 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-18
Identity = 60/133 (45.11%), Postives = 79/133 (59.40%), Query Frame = 0


Query: 104 RPLFPAGDFQKKNNN---ERGDESPVSCESSITII----EGMSRACRYSPEEKKERIERY 163
           R ++  GD Q    +   +R   SP++ ESS T +    E   R  RYS EE+KE+I +Y
Sbjct: 140 RRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISKY 199

Query: 164 RTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEIVKN------YPAQ------WS 218
           R KR QRNF K IKYACRK+LAD+RPR+RGRFAR NDE+ +N      +  Q      W+
Sbjct: 200 RAKRTQRNFTKTIKYACRKTLADNRPRVRGRFAR-NDEVFENPKIASSFTRQENDDDLWN 259

[Close]

BLAST of PI0008926 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-17
Identity = 59/139 (42.45%), Postives = 81/139 (58.27%), Query Frame = 0


Query: 86  TFSSSSPPPSAAIDPPVNRPLFPAGDFQKKNNNERGDESPVSCESSITIIEGMSRACRYS 145
           ++++ S P +A     + R ++  GD Q     +R  E+     S     E   +  RYS
Sbjct: 157 SYNNLSSPENAFFSSQMRR-VYSTGDLQNNMEMQRSSENSTMPFSE----EQNFKVGRYS 216

Query: 146 PEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEIVK------NY 205
            EE+KE+I +YR KRNQRNF K IKYACRK+LADSRPRIRGRFAR NDE+V+      + 
Sbjct: 217 AEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFAR-NDEVVEIPNIEDDD 276

Query: 206 PAQWSQEGEEEEEQGEANS 219
              W  +G  E+E+   +S
Sbjct: 277 SELWKLDGLHEKEEASVSS 289

[Close]

BLAST of PI0008926 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15
Identity = 42/75 (56.00%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 138 MSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEIVK 197
           +++  + SPE++KE+I RY  KRN+RNFNKKIKYACRK+LADSRPR+RGRFA+ NDE  +
Sbjct: 300 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK-NDEFGE 359

Query: 198 NYPAQWSQEGEEEEE 213
                +S   ++E+E
Sbjct: 360 PNRQAFSSHHDDEDE 373

[Close]

BLAST of PI0008926 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15
Identity = 42/75 (56.00%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 138 MSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEIVK 197
           +++  + SPE++KE+I RY  KRN+RNFNKKIKYACRK+LADSRPR+RGRFA+ NDE  +
Sbjct: 299 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK-NDEFGE 358

Query: 198 NYPAQWSQEGEEEEE 213
                +S   ++E+E
Sbjct: 359 PNRQAFSSHHDDEDE 372

The following BLAST results are available for this feature:

BLAST of PI0008926 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK53	1.3e-06	52.83	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q940T9	3.7e-06	49.12	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9LKL2	8.3e-06	42.11	Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
O50055	8.3e-06	51.02	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q9FDX8	1.1e-05	33.98	Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=...	[more]

BLAST of PI0008926 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CK56	3.7e-118	91.25	zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3CRZ2	9.2e-117	90.87	Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CK62	9.2e-117	90.87	zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KG14	4.6e-116	89.84	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV...	[more]
A0A5A7SW55	2.9e-94	78.01	Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of PI0008926 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463853.1	7.7e-118	91.25	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo]	[more]
XP_008463852.1	1.9e-116	90.87	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK143...	[more]
XP_011657240.1	9.4e-116	89.84	zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical p...	[more]
XP_038902180.1	7.3e-100	83.47	zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]	[more]
KAA0035270.1	6.0e-94	78.01	zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of PI0008926 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59990.1	9.0e-24	55.15	CCT motif family protein	[more]
AT1G63820.1	2.0e-18	45.11	CCT motif family protein	[more]
AT5G41380.1	2.2e-17	42.45	CCT motif family protein	[more]
AT2G33350.1	2.0e-15	56.00	CCT motif family protein	[more]
AT2G33350.2	2.0e-15	56.00	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 150..190 e-value: 2.8E-17 score: 62.5
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 149..191 score: 15.417831
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..128
None	No IPR available	PANTHER	PTHR31319:SF73	CCT MOTIF FAMILY PROTEIN	coord: 74..232
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 74..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008926.1	PI0008926.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding