PI0008877 (gene) Melon (PI 482460) v1

Overview


Name	PI0008877
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 20915889 .. 20916239 (-)
RNA-Seq Expression	PI0008877
Synteny	PI0008877

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGGTGGTGTGGTAGGAACTAAGGGAATTGTTGGTAATGGTGGCAAAGGAGGTAAGGTAGCCTTTGGCAATGCTGGTGCTGAAGGCAATGGAGGCAATGTAGCTCTTGGCAGGGTTGGCATCGGTGGGAGTGGAGGCAAGGCAGCATTTGGCAGTGGTGGCAGCGTGGCCTTGGGCAGAGGCGGCAGTGGAGGAATTGGAGGTATAGATGGGAATGGAGGTGGAGCTGCTGGTGTATCGAGAAGGCGACGAGAGCTAGCAAAGCTCATGTTGATGCTTGCCAATGACAAGGATACGATTAATAATAACTTCAAGCAACTGTTGAAAGCAGCCATGGTTTTGAATTAG

mRNA sequence

ATGGTTGGTGGTGTGGTAGGAACTAAGGGAATTGTTGGTAATGGTGGCAAAGGAGGTAAGGTAGCCTTTGGCAATGCTGGTGCTGAAGGCAATGGAGGCAATGTAGCTCTTGGCAGGGTTGGCATCGGTGGGAGTGGAGGCAAGGCAGCATTTGGCAGTGGTGGCAGCGTGGCCTTGGGCAGAGGCGGCAGTGGAGGAATTGGAGGTATAGATGGGAATGGAGGTGGAGCTGCTGGTGTATCGAGAAGGCGACGAGAGCTAGCAAAGCTCATGTTGATGCTTGCCAATGACAAGGATACGATTAATAATAACTTCAAGCAACTGTTGAAAGCAGCCATGGTTTTGAATTAG

Coding sequence (CDS)

ATGGTTGGTGGTGTGGTAGGAACTAAGGGAATTGTTGGTAATGGTGGCAAAGGAGGTAAGGTAGCCTTTGGCAATGCTGGTGCTGAAGGCAATGGAGGCAATGTAGCTCTTGGCAGGGTTGGCATCGGTGGGAGTGGAGGCAAGGCAGCATTTGGCAGTGGTGGCAGCGTGGCCTTGGGCAGAGGCGGCAGTGGAGGAATTGGAGGTATAGATGGGAATGGAGGTGGAGCTGCTGGTGTATCGAGAAGGCGACGAGAGCTAGCAAAGCTCATGTTGATGCTTGCCAATGACAAGGATACGATTAATAATAACTTCAAGCAACTGTTGAAAGCAGCCATGGTTTTGAATTAG

Protein sequence

MVGGVVGTKGIVGNGGKGGKVAFGNAGAEGNGGNVALGRVGIGGSGGKAAFGSGGSVALGRGGSGGIGGIDGNGGGAAGVSRRRRELAKLMLMLANDKDTINNNFKQLLKAAMVLN

Homology

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BLAST of PI0008877 vs. ExPASy TrEMBL
Match: A0A5D3CLF9 (Putative PE-PGRS family protein PE_PGRS46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003210 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.2e-42
Identity = 106/116 (91.38%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 1   MVGGVVGTKGIVGNGGKGGKVAFGNAGAEGNGGNVALGRVGIGGSGGKAAFGSGGSVALG 60
           MVGGVVGTKGIVGNGGKGGKVAFG AGAEGNGG+VALGRVGIGGSGG+AAFGSGG+V LG
Sbjct: 18  MVGGVVGTKGIVGNGGKGGKVAFGKAGAEGNGGSVALGRVGIGGSGGRAAFGSGGTVTLG 77

Query: 61  RGGSGGIGGIDGNGGGAAGVSRRRRELAKLMLMLANDKDTINNNFKQLLKAAMVLN 117
           RGGSGGIGGIDGNGGGA GVSRRRRELAK  LMLANDKD  NNNFKQLLKAAMVLN
Sbjct: 78  RGGSGGIGGIDGNGGGAGGVSRRRRELAKFTLMLANDKDANNNNFKQLLKAAMVLN 133

[Close]

BLAST of PI0008877 vs. ExPASy TrEMBL
Match: A0A1S3B3B8 (uncharacterized PE-PGRS family protein PE_PGRS46-like OS=Cucumis melo OX=3656 GN=LOC103485341 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.2e-42
Identity = 106/116 (91.38%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 1   MVGGVVGTKGIVGNGGKGGKVAFGNAGAEGNGGNVALGRVGIGGSGGKAAFGSGGSVALG 60
           MVGGVVGTKGIVGNGGKGGKVAFG AGAEGNGG+VALGRVGIGGSGG+AAFGSGG+V LG
Sbjct: 18  MVGGVVGTKGIVGNGGKGGKVAFGKAGAEGNGGSVALGRVGIGGSGGRAAFGSGGTVTLG 77

Query: 61  RGGSGGIGGIDGNGGGAAGVSRRRRELAKLMLMLANDKDTINNNFKQLLKAAMVLN 117
           RGGSGGIGGIDGNGGGA GVSRRRRELAK  LMLANDKD  NNNFKQLLKAAMVLN
Sbjct: 78  RGGSGGIGGIDGNGGGAGGVSRRRRELAKFTLMLANDKDANNNNFKQLLKAAMVLN 133

[Close]

BLAST of PI0008877 vs. ExPASy TrEMBL
Match: A0A0A0KLS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499075 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.7e-36
Identity = 95/106 (89.62%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 11  IVGNGGKGGKVAFGNAGAEGNGGNVALGRVGIGGSGGKAAFGSGGSVALGRGGSGGIGGI 70
           +VGNGGK GKVAFG+AGAEGNGGNVALG VGIGGSGG+AA GSGG+VALGRGGSGGIGGI
Sbjct: 1   MVGNGGKVGKVAFGSAGAEGNGGNVALGSVGIGGSGGRAALGSGGTVALGRGGSGGIGGI 60

Query: 71  DGNGGGAAGVSRRRRELAKLMLMLANDKDTINNNFKQLLKAAMVLN 117
           D NGGGAAGVSRRRRELAK MLMLANDKDTIN NFKQLLK AMVLN
Sbjct: 61  DRNGGGAAGVSRRRRELAKFMLMLANDKDTINKNFKQLLKTAMVLN 106

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BLAST of PI0008877 vs. ExPASy TrEMBL
Match: A0A498HVN6 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_021242 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.7e-05
Identity = 56/114 (49.12%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 4   GVVGTKGIVGNGGK---GGKVAFGNAGAEGNGGNVALGRVGIGGSGGKAAFGSGGSVALG 63
           G VGT G VGNG +   GGKVA G  G+EGNGGNV  GRVGI G+GG   FG  G V   
Sbjct: 57  GRVGTVGSVGNGVEGRGGGKVALGCVGSEGNGGNVVFGRVGIEGNGGIVVFGRDGIV--- 116

Query: 64  RGGSGGIGGIDGNGGGAAGVSRRRRELAKLMLMLANDKDTINNNFKQLLKAAMV 115
                   G    GGGAAGVS+R R  A L+  L +D     N  K++L  AMV
Sbjct: 117 --------GTVNAGGGAAGVSKRWR-AAWLIWTLESDSTATENRRKKILGKAMV 158

[Close]

BLAST of PI0008877 vs. ExPASy TrEMBL
Match: A0A498KQ53 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_014438 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.3e-04
Identity = 61/134 (45.52%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 1   MVGGVVGTKGIV------------GNG--GKGGKVAFGNAGAEGNGGNVALGRVGIGGSG 60
           +V G+VG +GIV            GNG  G+GGKVA G  G EGNGGNV LG VG  G+G
Sbjct: 4   IVDGIVGIEGIVVGNDGSGLAGNGGNGLEGRGGKVALGCVGNEGNGGNVVLGCVGNEGNG 63

Query: 61  GKAAF------GSGGSVALGRGGSGGIGGIDGNGGGAAGVSRRRRELAKLMLMLANDKDT 115
           G          G+GG+V  GR G  G G     GGGAAGVS+R R  A L+  L +D   
Sbjct: 64  GNVVLGRVGTEGNGGNVVFGRDGMVGTGSA---GGGAAGVSKRWR-AAWLIRTLESDSTA 123

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BLAST of PI0008877 vs. NCBI nr
Match: XP_008441114.1 (PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46-like [Cucumis melo] >KAA0036339.1 putative PE-PGRS family protein PE_PGRS46-like [Cucumis melo var. makuwa] >TYK12733.1 putative PE-PGRS family protein PE_PGRS46-like [Cucumis melo var. makuwa])

HSP 1 Score: 179.9 bits (455), Expect = 1.3e-41
Identity = 106/116 (91.38%), Postives = 109/116 (93.97%), Query Frame = 0


Query: 1   MVGGVVGTKGIVGNGGKGGKVAFGNAGAEGNGGNVALGRVGIGGSGGKAAFGSGGSVALG 60
           MVGGVVGTKGIVGNGGKGGKVAFG AGAEGNGG+VALGRVGIGGSGG+AAFGSGG+V LG
Sbjct: 18  MVGGVVGTKGIVGNGGKGGKVAFGKAGAEGNGGSVALGRVGIGGSGGRAAFGSGGTVTLG 77

Query: 61  RGGSGGIGGIDGNGGGAAGVSRRRRELAKLMLMLANDKDTINNNFKQLLKAAMVLN 117
           RGGSGGIGGIDGNGGGA GVSRRRRELAK  LMLANDKD  NNNFKQLLKAAMVLN
Sbjct: 78  RGGSGGIGGIDGNGGGAGGVSRRRRELAKFTLMLANDKDANNNNFKQLLKAAMVLN 133

[Close]

BLAST of PI0008877 vs. NCBI nr
Match: KAE8647548.1 (hypothetical protein Csa_003491 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 4.7e-36
Identity = 97/110 (88.18%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 7   GTKGIVGNGGKGGKVAFGNAGAEGNGGNVALGRVGIGGSGGKAAFGSGGSVALGRGGSGG 66
           G+ G  GNGGK GKVAFGNAGAEGNGGNVALG VGIGGSGG+AA GSGG+VALGRGGSGG
Sbjct: 14  GSAGAEGNGGKVGKVAFGNAGAEGNGGNVALGSVGIGGSGGRAALGSGGTVALGRGGSGG 73

Query: 67  IGGIDGNGGGAAGVSRRRRELAKLMLMLANDKDTINNNFKQLLKAAMVLN 117
           IGGID NGGGAAGVSRRRRELAK MLMLANDKDTIN NFKQLLK AMVLN
Sbjct: 74  IGGIDRNGGGAAGVSRRRRELAKFMLMLANDKDTINKNFKQLLKTAMVLN 123

[Close]

BLAST of PI0008877 vs. NCBI nr
Match: RXH74062.1 (hypothetical protein DVH24_021242 [Malus domestica])

HSP 1 Score: 58.2 bits (139), Expect = 5.6e-05
Identity = 56/114 (49.12%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 4   GVVGTKGIVGNGGK---GGKVAFGNAGAEGNGGNVALGRVGIGGSGGKAAFGSGGSVALG 63
           G VGT G VGNG +   GGKVA G  G+EGNGGNV  GRVGI G+GG   FG  G V   
Sbjct: 57  GRVGTVGSVGNGVEGRGGGKVALGCVGSEGNGGNVVFGRVGIEGNGGIVVFGRDGIV--- 116

Query: 64  RGGSGGIGGIDGNGGGAAGVSRRRRELAKLMLMLANDKDTINNNFKQLLKAAMV 115
                   G    GGGAAGVS+R R  A L+  L +D     N  K++L  AMV
Sbjct: 117 --------GTVNAGGGAAGVSKRWR-AAWLIWTLESDSTATENRRKKILGKAMV 158

[Close]

BLAST of PI0008877 vs. NCBI nr
Match: RXI07872.1 (hypothetical protein DVH24_014438 [Malus domestica])

HSP 1 Score: 55.1 bits (131), Expect = 4.8e-04
Identity = 61/134 (45.52%), Postives = 73/134 (54.48%), Query Frame = 0


Query: 1   MVGGVVGTKGIV------------GNG--GKGGKVAFGNAGAEGNGGNVALGRVGIGGSG 60
           +V G+VG +GIV            GNG  G+GGKVA G  G EGNGGNV LG VG  G+G
Sbjct: 4   IVDGIVGIEGIVVGNDGSGLAGNGGNGLEGRGGKVALGCVGNEGNGGNVVLGCVGNEGNG 63

Query: 61  GKAAF------GSGGSVALGRGGSGGIGGIDGNGGGAAGVSRRRRELAKLMLMLANDKDT 115
           G          G+GG+V  GR G  G G     GGGAAGVS+R R  A L+  L +D   
Sbjct: 64  GNVVLGRVGTEGNGGNVVFGRDGMVGTGSA---GGGAAGVSKRWR-AAWLIRTLESDSTA 123

The following BLAST results are available for this feature:

BLAST of PI0008877 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008877 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLF9	6.2e-42	91.38	Putative PE-PGRS family protein PE_PGRS46-like OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3B3B8	6.2e-42	91.38	uncharacterized PE-PGRS family protein PE_PGRS46-like OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KLS6	8.7e-36	89.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499075 PE=4 SV=1	[more]
A0A498HVN6	2.7e-05	49.12	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_021242 PE=4 SV=1	[more]
A0A498KQ53	2.3e-04	45.52	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_014438 PE=4 SV=1	[more]

BLAST of PI0008877 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441114.1	1.3e-41	91.38	PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS46-like [Cucumis melo] ...	[more]
KAE8647548.1	4.7e-36	88.18	hypothetical protein Csa_003491 [Cucumis sativus]	[more]
RXH74062.1	5.6e-05	49.12	hypothetical protein DVH24_021242 [Malus domestica]	[more]
RXI07872.1	4.8e-04	45.52	hypothetical protein DVH24_014438 [Malus domestica]	[more]

BLAST of PI0008877 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008877.1	PI0008877.1	mRNA