PI0008759 (gene) Melon (PI 482460) v1

Overview


Name	PI0008759
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 30594977 .. 30596286 (-)
RNA-Seq Expression	PI0008759
Synteny	PI0008759

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTAAACCACTTTCACCTCCACCGCCGGCCACAGACGAACCGGAAGTTCCACCTCCACAACTCACACCTCCACCGTCGGCACTATCTAAACCACCTTCATCTTCACCGCCGGCCACGGACGAACCGGAAGTTCCACCTCCACCAACTGAACTCACACCGCCGGCCACGGACGAACCGGAAGTTCCACTTCCACCAACTGAACTCACACCTCCACCGTCGACACTGTCTAAACCACCTCCACCTCCACCATTCCCGATACTCAATCGAGCGCTTCGGCGTCGGAGGATATCAGCCACCCAAGAAGAAGGATTGGGAACTCTGGAAATAAGGGAGGAAAGCCGACCACAAACAGAGATCATAGAAGCAAGCCAACCACAAACAGAGATCACAGAAGTCCCCGAGCCAACTCAAGATTTTATTGTAATGAAATCTTCCGATTCATCAAATTTGTCAATCCAATCCATGGAGAAGGAAGGTCGGCAAGAAGTCGATACGAAACTGGAAAGACTTTGGAGAAGAACTTGGACAATATCGACCTTAGTGCTTGGGGCAGTTATCTTAGGCTCTACTACCCAAACAAGTCTCTTCAAAGGTACTTTTCAATGGATTATTAAACCTCTGGTATTATTTTGTTATGGTAGCTTTGGGTCTGCCTTTATTGCTTCTTTCTTATTGCTTGCATGCTGTAATTACTGTGGTAGAAAATATGTTTCTTGGGCATGGATAAAAAAATTTGTGTGGAGGTGGAGTGAAGAAAATAGAAAAGAAAAAGATCTAGAAATTGGAGAAGAAACAGATCCAGAAAAGGGAAAAGAAACGAATGGGCTGAGAAACAATGTTCAAAGATTTCTAAAATTTTTGGCACAACTAACAATATTAGTTTGTTGTTATTTTGTGTCAATTAATTTAGAAAAAACTGAGTATTCCTTAATTTGGATCCTGAGTGTGAGTATTTTTCCATTGTTCTTTTCTCAATCCTTACAAATCCAAGTAGATTGTGGGGTTTTTGACTCTTTAGTTAGTGTTGCTGGAAGTTTGATCACCGAAATCGATCTTCGTGATCCTAGAATTAAGGAATTTAAACCTTTTATTCAAATCTTTTCCTATGTAATCCTGGGCATAGCAATATTTTGTAAGAATTGGTACTTTTGATGTGATTAGGAGAACTGGAATCTTGTGGGAGTATTCCAAAACTCATTTTCTTACTTTTATAGGTTGTTTTTACGTATTTTTGGTTTTTTTTGTCTTTCTTTTTTAAGTTGCTTTCTGTATTTTTGAAGTTTGATAGAAAGGAAGAATATTAG

mRNA sequence

ATGGCTACTAAACCACTTTCACCTCCACCGCCGGCCACAGACGAACCGGAAGTTCCACCTCCACAACTCACACCTCCACCGTCGGCACTATCTAAACCACCTTCATCTTCACCGCCGGCCACGGACGAACCGGAAGTTCCACCTCCACCAACTGAACTCACACCGCCGGCCACGGACGAACCGGAAGTTCCACTTCCACCAACTGAACTCACACCTCCACCGTCGACACTGTCTAAACCACCTCCACCTCCACCATTCCCGATACTCAATCGAGCGCTTCGGCGTCGGAGGATATCAGCCACCCAAGAAGAAGGATTGGGAACTCTGGAAATAAGGGAGGAAAGCCGACCACAAACAGAGATCATAGAAGCAAGCCAACCACAAACAGAGATCACAGAAGTCCCCGAGCCAACTCAAGATTTTATTGTAATGAAATCTTCCGATTCATCAAATTTGTCAATCCAATCCATGGAGAAGGAAGGTCGGCAAGAAGTCGATACGAAACTGGAAAGACTTTGGAGAAGAACTTGGACAATATCGACCTTAGTGCTTGGGGCAGTTATCTTAGGCTCTACTACCCAAACAAGTCTCTTCAAAGTTAGTGTTGCTGGAAGTTTGATCACCGAAATCGATCTTCGTGATCCTAGAATTAAGGAATTTAAACCTTTTATTCAAATCTTTTCCTATTTGCTTTCTGTATTTTTGAAGTTTGATAGAAAGGAAGAATATTAG

Coding sequence (CDS)

ATGGCTACTAAACCACTTTCACCTCCACCGCCGGCCACAGACGAACCGGAAGTTCCACCTCCACAACTCACACCTCCACCGTCGGCACTATCTAAACCACCTTCATCTTCACCGCCGGCCACGGACGAACCGGAAGTTCCACCTCCACCAACTGAACTCACACCGCCGGCCACGGACGAACCGGAAGTTCCACTTCCACCAACTGAACTCACACCTCCACCGTCGACACTGTCTAAACCACCTCCACCTCCACCATTCCCGATACTCAATCGAGCGCTTCGGCGTCGGAGGATATCAGCCACCCAAGAAGAAGGATTGGGAACTCTGGAAATAAGGGAGGAAAGCCGACCACAAACAGAGATCATAGAAGCAAGCCAACCACAAACAGAGATCACAGAAGTCCCCGAGCCAACTCAAGATTTTATTGTAATGAAATCTTCCGATTCATCAAATTTGTCAATCCAATCCATGGAGAAGGAAGGTCGGCAAGAAGTCGATACGAAACTGGAAAGACTTTGGAGAAGAACTTGGACAATATCGACCTTAGTGCTTGGGGCAGTTATCTTAGGCTCTACTACCCAAACAAGTCTCTTCAAAGTTAGTGTTGCTGGAAGTTTGATCACCGAAATCGATCTTCGTGATCCTAGAATTAAGGAATTTAAACCTTTTATTCAAATCTTTTCCTATTTGCTTTCTGTATTTTTGAAGTTTGATAGAAAGGAAGAATATTAG

Protein sequence

MATKPLSPPPPATDEPEVPPPQLTPPPSALSKPPSSSPPATDEPEVPPPPTELTPPATDEPEVPLPPTELTPPPSTLSKPPPPPPFPILNRALRRRRISATQEEGLGTLEIREESRPQTEIIEASQPQTEITEVPEPTQDFIVMKSSDSSNLSIQSMEKEGRQEVDTKLERLWRRTWTISTLVLGAVILGSTTQTSLFKVSVAGSLITEIDLRDPRIKEFKPFIQIFSYLLSVFLKFDRKEEY

Homology

[Close]

BLAST of PI0008759 vs. NCBI nr
Match: XP_038868614.1 (basic proline-rich protein-like, partial [Salvelinus namaycush])

HSP 1 Score: 56.2 bits (134), Expect = 4.5e-04
Identity = 48/89 (53.93%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 5   PLSPPPPATDEPEVPPPQLTPPPSALSKPPSSSPPATDEPEVPPPPTELTPPATDEPEVP 64
           P  PPPP T  P  PPP LTPPP  L+ PP + PP T  P  PPPPT   PP T  P  P
Sbjct: 201 PPPPPPPPTPPPPTPPPPLTPPPPPLTPPPPTPPPPTPPPLTPPPPT--PPPPTPPPLTP 260

Query: 65  LPPT------ELTPPPSTLSKPPPPPPFP 88
            PPT       LTPPP  L+ PPPPPP P
Sbjct: 261 PPPTPPPPPPPLTPPPPPLTPPPPPPPPP 287

The following BLAST results are available for this feature:

BLAST of PI0008759 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008759 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008759 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038868614.1	4.5e-04	53.93	basic proline-rich protein-like, partial [Salvelinus namaycush]	[more]

BLAST of PI0008759 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008759.1	PI0008759.1	mRNA