PI0008718 (gene) Melon (PI 482460) v1

Overview
NamePI0008718
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr12: 6505629 .. 6510312 (-)
RNA-Seq ExpressionPI0008718
SyntenyPI0008718
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGATGGAAGCCATCACTCAGATCAAAAGGGTAAAGGAAAGAACTGATGAGTTCTCAGAAAGCACATTTCTTCCACCCCATTTCCAGGTACTTCAAAAACCCATCACCTATTGTTCATCTTTAATAAAAAAAAATTTCTTTTCCATCCCATTTTAATTAAACTTCATCATCTATGATCCTGTTCCTGTTCCTGACTTCCTGTCTGTTTCTTTTCTTCATTCATCGATATGGTTTCCTTAATGCTGGAATTCTTGACGTTTTGGATTCATGTGCTGCTGCTGTGTTGTGTATGTCTGATTTGTTTTCTTGATAGTCACAAGAACATGAATTATTGGGCATATACTTTTGTGGATTTCATATATTTTAATTTTTATTGGTTGATTTATTGTTTATTTATTATTAATGAATATTATGATTCCTGCATGGATTGGTGTGAGGGTTGTTGTCCCCCACTGGCCACTCCCCCATTGTGTTGTCTTGTTGGTTTCCCTTCTCTCTAGCATCGTATGGTTATGTTTATGTTTATATGTCCATGACAGGTGTTAGAAGCTAGCTACTTTTAACTATGTTCATGCCATGTGTTTGTCACTGAGTGAAAAAAGCGCACTTTCACAAAATAGGACAACTTTTTACTATTTTCCTCTTCTTTAAATGGTTGTTCCAGTGTTAAGCCAACTAGGGTTTCATGGGGTTTGGTGACATGCCCTAGGCCTAATTAGATTCCTGCTAATTAGTGTTCAACCAACCAAAACGAGAGTAACTATTCCTTTGCTTTGCCCTAAGGCCTATAAATATAATATTTACCTGTTCAAGACGTTTTTTTAAAATTTATAGGTCACCTCTTTTGAAAACCTAATAGGTGAGCTATAAATTTTACCGTTGTGGTTTATGAAATACATAAATCGTATCTTTATATCTTATAGTATAGTATCTTTGAAATAACATATAGTTTATTTTAAATCCCATTTGACGAACTACTAGGCGGGGTTTTTTTTTTTTTTTTCATGCTACTGCATAGGGTGCTTAAAATTATATTTAAACATAGGGATACAATTTGCAGATCTCATAGATCAGAGTGTCACTTGCATGTGCCTGACAAGTCAAACAGTCAACTTTGAATCCCTTCTATGCCATTAGGTTCGTACAAGACCACGGTCTCACAAAGATTATGCATGCTAAATTTAGGTGAACAAGCCTTGGTGGCCAAACTAATGTATCTATTAAAAGATCACTGCTAAAATCAAAAGAACTTAGAAATATAAAGTAGGATTTTTAGCAAGGAGAGGAAAAAGGGAGTGTTTCAAGGTATGGATAGGAATTGTAAGTAAGGTTTTTTGTTTTTTGTTTTTGTTTTTTTTTTTTTTTACTTTGGTTTCAAAAACATTTTGTAATAATTGTTGCCTGGGCAATCTTAGTTGGAAACCCTTTTTCTAAGAAATTTTTCTGTAGATTTGATTCTTTCCTTTCAATGGGAAGGAGTTGTTTCTATAAAATAAAATAAATAAGTAGGTTATTAAAAGTGAGTTTAAGACCATTTTTTGGAAATAGAGTTCTCAAGATGTTCAAGTACTTCACTGAGCTCGCTAGTGTGAGCTTGTAACCGAACATGGGTATTGAAGTGGTTGGATGTCGGTTCGGTCCACAAAGTAGGGTCTTACTAGGATAATCTCTACCCTGTCTGTTCCAAGTAGGGAGTTGGGCTTTGGCTTTGGGCGAAAGTCCATGGTTCGCTGCCACTAAAGACGGAGGGAACCGCATGAGGCTGGTTTCACAGAGGAGTGTATTCTCATCTTTACAAAAAAAATGTTTTACTTTTAAGAAAAAGAACAATTAAGAGTCAGCATAGTACAATTTGACCCTTTGAAAAATTTTAGAAATACTTTTTACTATAGTGTATTTCATGATAATTTTGAACGAATGTGCTTCAAAATCATCTTTGCCACTGTCATGCATTTGAACACACCTAGAAATGAAAACATAATTTTGTAAATAAGTAGGATACATATTATGGAGTCGTTGATCGCAACGTTGGCCACGATCAATTCATTCCTAGATGAGTGCAAGTCATATGATTGTAAGAAATTGTGCTATGCATGTGCATGATTCTTCTAAACACCCATTTTTAGACTCACCATATGTAGGCAGAAACTACTCGTGCGTTGCTATTCCACCATCACTGTGGCAGAGCTGAACTTAGTCTAAAGAAGTAGGCTAATGATAAAAGATTTTCTACAAGACATCTTTCATTTCCTTAAACGTTGAGCTAGTTTTGCATGCCTTAATCTCACAAGATAATTTGTTAGACTCTATAACATTTAAATGTCAAAAAAGCTCAGTGTATTGAATCTTAGATAGGTGGCTATTGTTGGATTGAACTCATTCCCTTTATCTTCTCTATTATACTCATAGTTCTTTGGCCACTAGACCAATTTATGATTAATAATATTTAAAAGTTCTCAAATCTTACAACATTATATAAATTGCTATCCTATGATCATCACATTAGATCTAGATGTTAGGTATCTTTAAGTTCTTAAGTTTTTGAATGTTTGTTTTCCTGAGCTTTAGATGGTAATTTTTTTTCCCGTTCAAGTATCTTCTTGAAAGAAATAGAAATATGGAGTACATCTTTAGTTGTAGACAACTTGTAGGGAGCACATGACACATGTTTCAGCATGCTAGTGTCTCTCACATCAACACCTTGCTAAGAATAGAAGAACTTGCTTTTGAGCTCTACTTTTTCCACTTTTCGTCTCACATTTTATTCTGATTTTGGTGGTTTGACATTCAAATTTGATTATTTATACCTCTTTTGTGGTCAATATGGAATAATTTACATGCAAATCAGAATTTAGCTAAGAAAAGTAGAGGAACAGCTTTTTAGGGGGAGAAGAATCGAAGTGATTTTAACTTTAAAAAGGAATTCATTTTAGGAAAAATCAAATATAGATTCTTCTCTACGTAACTTTAGGGTTTTTAATAAAAGAAAGTATCAGAAGATGGTTGAGGAAACTATTCTCTCCAGTGGAGATTGTTCTATTGATACCATTTGATACCCCAGTTTAATTAATGATCTTTTCCGTCTTATGGAGTTGCTGGTTCTAACTTTATCCTGTTACTTCAGAAAACATTGATGGATATCTTCAAGAGAAAAAAAACTTAAAAAATCAAATATATTTGTGGTCATTTATCATTAATAGACACCGAAAACATCGATTCCTACCAATTTTTATCATTGTCTATCACGGATAGACTGTTACATTTTTGATATATTTAAAAATATTTTCACTATTTAAAACAATTTCTTTGTTATTTTAGTAATATTATTATACCTTTTATAAAGAAAATTCAATCAAACAAGGTTCTATAGTCAAGGTCCCTTGTGGGCGCCTGACTTTGGGTAAATCAACAAATCATTAACATGAACTGAAGTTTACAACAATTGTAGGTATTATTTTAAAACACTGATTAGCAGTTCAGTTAAAGACAACAGTCAGTTGATCGATGATGGATGATTGTTTAATTATGAACCAAAAGTAAATAAAATCAATAGGATTTTAAAAAATTTATAGGATTGAAGTTCTCGTTTTCTCTCTTCTTCTTTTTGGTGGTGAAGGTGTTGTCAAAATTTAACACTGCATGTTGGGTCACTGTGTAGTTGAATGCCCAATGGGCTATTGGGCTTAATAAATTAAAAAAAATGCTATTGGGTCATACGAGGGATCAAACATATCTAATAAAAAACAATCAAATAACCATGTAATCTAATTAGTATTGCTATCTACTTTCATTTTATTTTATTTTCCTCTGGTTGGCACTCTCTTCTAAGTTAACAAGACATATTCAGCCGGTGAACGTACTCCATAGTTATCTTCTTGCTTTAACTGAAAAACAATCAAATAGTCCTTTCACTCTCATCTGTGATTAGAAGTTAAAAATAATCAGTCCCTTTTTTCATCTGAATTTGATGAAGATCAAGAGAATCTTTTTTTAAATTTCTTTACTTACTCATATGATAGAAAGTTGAATATATAATTGAGATATCATTCATGAACTTTTTGGCTTTCTTTCTTTTTTCTTCGAAAGGAAAGCTAAAAGTAAGATGTTTGACTTTGTGGTGGTTAGAGGGCCCAATTCAAACGGCTGAACTTGTTAATAGGAGCTATTATTTTTTTTTAAGTAGAAATTGAACTAGTCAATAGGAGCTATTAATTTTTTAAAAGTAGAAAATGCTATTCTTTGATTCTTAGTTATTGGGTACTACCTTTCTTTCTTTTAACAGATTCAAAGCCTTCCATGAGATGCAATTAACAACTCGTCAAATCTGGTGATGATTTGCTTGTTAGAGAACAATATCTTTTGAAATATTTTGTGCATTCTAGAAATATCAGCATCTTAACAAAAAATATCTTTAATGACACAGCCTGTGATCTACATTTGGCATTCTGTTCCAATGCTTTCAAGTCCAATTTAGGCTGAAAATTTTCACCCAGAAACCAGTTTGTAGAATTATTTTCATAGATTTCAGTGGATGTCATTTTCTCTGGCAGGTTGTGATGGTGGAAAGATGAAGATGGAGCACCAGAGAGTGGCCTAGACCATCGTGAGTCCTCCATGTTCAGATCTTCACATTTTTATGCTTCTGAAACACTTGATTTTTCTTTGCTTTATCCCATTTTGA

mRNA sequence

ATGCTGATGGAAGCCATCACTCAGATCAAAAGGGTAAAGGAAAGAACTGATGAGTTCTCAGAAAGCACATTTCTTCCACCCCATTTCCAGACCATCGTGAGTCCTCCATGTTCAGATCTTCACATTTTTATGCTTCTGAAACACTTGATTTTTCTTTGCTTTATCCCATTTTGA

Coding sequence (CDS)

ATGCTGATGGAAGCCATCACTCAGATCAAAAGGGTAAAGGAAAGAACTGATGAGTTCTCAGAAAGCACATTTCTTCCACCCCATTTCCAGACCATCGTGAGTCCTCCATGTTCAGATCTTCACATTTTTATGCTTCTGAAACACTTGATTTTTCTTTGCTTTATCCCATTTTGA

Protein sequence

MLMEAITQIKRVKERTDEFSESTFLPPHFQTIVSPPCSDLHIFMLLKHLIFLCFIPF
Homology
[Close]
BLAST of PI0008718 vs. ExPASy TrEMBL
Match: A0A0A0LPT3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025910 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.6e-20
Identity = 56/72 (77.78%), Postives = 56/72 (77.78%), Query Frame = 0 

Query: 1  MLMEAITQIKRVKERTDEFSESTFLPPHFQT---------------IVSPPCSDLHIFML 58
          MLMEAITQIKRVKERTDEFSESTFLPPHFQ                IVSPPCSDLHIFML
Sbjct: 1  MLMEAITQIKRVKERTDEFSESTFLPPHFQVEWWKNEDGAPESGLPIVSPPCSDLHIFML 60

The following BLAST results are available for this feature:
BLAST of PI0008718 vs.
Match NameE-valueIdentityDescription
BLAST of PI0008718 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPT39.6e-2077.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025910 PE=4 SV=1[more]
BLAST of PI0008718 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of PI0008718 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0008718.1PI0008718.1mRNA