PI0008610 (gene) Melon (PI 482460) v1

Overview


Name	PI0008610
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ribonuclease T(2)
Location	chr07: 10461867 .. 10463654 (+)
RNA-Seq Expression	PI0008610
Synteny	PI0008610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGATATCATATTCATGGAATATGATTCACTTTCAAGATGCCTTGGTGGTGAAATGGTAGACACGCGAGACTCAAAATCTCATGCTTATTTATTAAGCTATAGTCAAATTCACTCACGTTTGCAGATTAATACCTTGATAGAGGATATTCAAAAGTATTGGCCGACTTACCAATGTGGTACTACATCCACATGCCATAAGACCAAGGGATCATTTTGGGCACATGAGGTTCAAATTATTCCCCCTTTCACTCCTTTCCTTAAATAGCTTATCAATATCAAAGTTTTGAGACTAACGATTTTTTTTTATCTCTTTATTGCCATTATTATATGATGATGACCCTTTGAAATATTACCATTGCTATAGTATGGTGAGTTTCTTTTCTTTAATTTCATTTTTCTTTTCTTTTGGAATTTGATATAAATATATATATTTTTAATTTAAATGTAACTTAAACTTAACATCAGAATGATTTATAAAAGTGTTTATTTTGCAGAGAAGCATGGGACATGTGCAGCTCCTATAATTGTGGGAGAATATGATTACTTTTTGACAACCCTCACCATCTTCTCCAAGTACAATGTCACTGTAAGTTTTTTCATCTTTTTTTTATTTAAAGTATAATTTCTTCTTAGTTTTTTTTTTTTTGTTTGTTATCATGTCTATTATAATATTACTATAAAAAATAAATTCAATTATTGAGTTTGGGTATTAAAATTGGGTGTCTTTTTTTTGTTAACAGAAAGTTTTGAGTGAGGCTGGATTTGTAGCTTCCAATACTGAAAAGTATCCTATTGAAGATGTGGTAGCTGCAATTAAGAATGAATTCAATGCAACTCCAAAGATTACTTGTGCTAAAAAGGGGGTTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGGTAACAGTTTTTTCCATTTTGAACCGATTATCTGTTTATGTTTTATGGGTTCTTTATACTATATTTTATCAACATGGAAAGTACTCTTAACAAAATTATCTGTGTTCATAAAATCAAATAAAACTAAATCAATTAGGTCTTGTTTTTGTTTACCGTTTACATCTTTTTATAGTAAAATAGTTGAATTCTTAGTTAATTTCTAGAAAAATTAACAAATTTTTTAATAACTAATTCTTTTTAGCTTACTTGTTTTTTACCATATTAGTAAAAAGTAGATAATAAAATTTAAAAATTAAAGAGGTAAATATAGAATGTCTATAAGTTAATTTTCCAAAATTTTTTAAAAATCAAATAGTTACAAAAGCTACCCTAATTATGATCCATAAGTACAAGATACTAACGAAAGTAAATCTCTACTTGTTACAGCCACGTGACTGCAATCTTAAGAATTCATGCGCCGATTTCATTAAGCTCCCAACATATGAACCTCAGGGTATGTTTTTCTTTTTCTTAATTAAAAGAGAAGTTAATTTTAGAGTTTGATTGCATATAAAATAATGTCATTTAGATACTATGTATGTCAAATCATTACTAAACTCAAAAGCTTAAGTTAAAAGCTAATAATTAATATATGATATACTTAATCTTGTTTAATATATTGTTTTTAACATATTTGTATTACTTATGATGCAGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAACCTTTTTTTTAAAACCTAAAAGAGATGCCTAGAGAAACCCTTTAATTATTAACATTTTGGCCATGTCTTTTGGGCAATGTCTTTGTGATCTTAAGCTCACCCAATTTCTTTGAGTTGAAAGGTTCCATTA

mRNA sequence

TAGATATCATATTCATGGAATATGATTCACTTTCAAGATGCCTTGGTGGTGAAATGGTAGACACGCGAGACTCAAAATCTCATGCTTATTTATTAAGCTATAGTCAAATTCACTCACGTTTGCAGATTAATACCTTGATAGAGGATATTCAAAAGTATTGGCCGACTTACCAATGTGGTACTACATCCACATGCCATAAGACCAAGGGATCATTTTGGGCACATGAGTATGAGAAGCATGGGACATGTGCAGCTCCTATAATTGTGGGAGAATATGATTACTTTTTGACAACCCTCACCATCTTCTCCAAGTACAATGTCACTAAAGTTTTGAGTGAGGCTGGATTTGTAGCTTCCAATACTGAAAAGTATCCTATTGAAGATGTGGTAGCTGCAATTAAGAATGAATTCAATGCAACTCCAAAGATTACTTGTGCTAAAAAGGGGGTTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGCCACGTGACTGCAATCTTAAGAATTCATGCGCCGATTTCATTAAGCTCCCAACATATGAACCTCAGGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAACCTTTTTTTTAAAACCTAAAAGAGATGCCTAGAGAAACCCTTTAATTATTAACATTTTGGCCATGTCTTTTGGGCAATGTCTTTGTGATCTTAAGCTCACCCAATTTCTTTGAGTTGAAAGGTTCCATTA

Coding sequence (CDS)

ATGGAATATGATTCACTTTCAAGATGCCTTGGTGGTGAAATGGTAGACACGCGAGACTCAAAATCTCATGCTTATTTATTAAGCTATAGTCAAATTCACTCACGTTTGCAGATTAATACCTTGATAGAGGATATTCAAAAGTATTGGCCGACTTACCAATGTGGTACTACATCCACATGCCATAAGACCAAGGGATCATTTTGGGCACATGAGTATGAGAAGCATGGGACATGTGCAGCTCCTATAATTGTGGGAGAATATGATTACTTTTTGACAACCCTCACCATCTTCTCCAAGTACAATGTCACTAAAGTTTTGAGTGAGGCTGGATTTGTAGCTTCCAATACTGAAAAGTATCCTATTGAAGATGTGGTAGCTGCAATTAAGAATGAATTCAATGCAACTCCAAAGATTACTTGTGCTAAAAAGGGGGTTGTCAAAGAACTTTGGTTATGCTTTGACAAAAGCTTTGAGCCACGTGACTGCAATCTTAAGAATTCATGCGCCGATTTCATTAAGCTCCCAACATATGAACCTCAGGAGCCTAACAAGGTTGAGGGAGCAATTCCATGGATTGCTGATGTTGAAGAAATTATTTAA

Protein sequence

MEYDSLSRCLGGEMVDTRDSKSHAYLLSYSQIHSRLQINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTIFSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAKKGVVKELWLCFDKSFEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII

Homology

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BLAST of PI0008610 vs. ExPASy Swiss-Prot
Match: P42814 (Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41
Identity = 73/149 (48.99%), Postives = 108/149 (72.48%), Query Frame = 0


Query: 37  QINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTI 96
           +I+TL++ ++KYWP+  CG+ S+C+  KGSFW HE+EKHGTC++P+   EY+YFLTTL +
Sbjct: 95  EISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNL 154

Query: 97  FSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAKKGVVKELWLCFDKS 156
           + K+NVT VL +AG+VASN+EKYP+  +V AI+N F+ TP++ C K+  + E+ +CF K 
Sbjct: 155 YLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVC-KRDAIDEIRICFYKD 214

Query: 157 FEPRDC------NLKNSCADFIKLPTYEP 180
           F+PRDC        + SC  ++ LP Y P
Sbjct: 215 FKPRDCVGSQDLTSRKSCPKYVSLPEYTP 242

[Close]

BLAST of PI0008610 vs. ExPASy Swiss-Prot
Match: Q7M456 (Ribonuclease Oy OS=Crassostrea gigas OX=29159 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.7e-16
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 0


Query: 41  LIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAA--PIIVGEYDYFLTTLTIFS 100
           L+ +++KYWP     T +       SFW HE+ KHGTCA   P    E  YF   L + +
Sbjct: 65  LVPELKKYWPNLYPDTKA------NSFWEHEWSKHGTCATSLPATSNELKYFGMGLKLHA 124

Query: 101 KYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITC------AKKGVVKELWLC 160
           KYN++++L   G + S T  Y I +  AA+K E      I C       KK ++ E+ +C
Sbjct: 125 KYNISRILVNQGILPSKTAGYMINETEAAVKRELGVDAVIECVYDKEKTKKQLLYEISIC 184

Query: 161 FDKSFEPRDCNLK 166
             K FE   CN K
Sbjct: 185 LTKEFELISCNKK 191

[Close]

BLAST of PI0008610 vs. ExPASy Swiss-Prot
Match: P80022 (Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-12
Identity = 43/152 (28.29%), Postives = 78/152 (51.32%), Query Frame = 0


Query: 33  HSRLQINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLT 92
           + + QI+ LI  +Q+ WPT  C + S       +FW+HE+EKHGTCA  ++  ++ YF  
Sbjct: 85  YDQSQISDLISSMQQNWPTLACPSGS-----GSTFWSHEWEKHGTCAESVLTNQHAYFKK 144

Query: 93  TLTIFSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITC----AKKGVVKE 152
            L + ++ ++  +L  A  +  + E Y + ++  AIK+    TP I C    +    + +
Sbjct: 145 ALDLKNQIDLLSILQGAD-IHPDGESYDLVNIRNAIKSAIGYTPWIQCNVDQSGNSQLYQ 204

Query: 153 LWLCFDKSFEPR-DCNL--KNSCADFIKLPTY 178
           +++C D S     +C +     C   I+ PT+
Sbjct: 205 VYICVDGSGSSLIECPIFPGGKCGTSIEFPTF 230

[Close]

BLAST of PI0008610 vs. ExPASy Swiss-Prot
Match: P42813 (Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.9e-12
Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 38  INTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTIF 97
           I+ L+  ++K WPT  C + S       +FW HE+EKHGTC+  +I  +++YF T L + 
Sbjct: 91  ISDLLTSMKKSWPTLACPSGS-----GEAFWEHEWEKHGTCSESVI-DQHEYFQTALNLK 150

Query: 98  SKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAKKG----VVKELWLCF 157
            K N+   L++AG +  + + Y +E +  +IK     TP + C + G     + +++LC 
Sbjct: 151 QKTNLLGALTKAG-INPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCV 206

[Close]

BLAST of PI0008610 vs. ExPASy Swiss-Prot
Match: P42815 (Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.5e-11
Identity = 40/125 (32.00%), Postives = 64/125 (51.20%), Query Frame = 0


Query: 36  LQINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLT 95
           L+++ L+ D+Q+ WPT  C +          FW HE+EKHGTCA   +  ++DYF   L 
Sbjct: 81  LRVSDLMSDLQREWPTLSCPSNDGM-----KFWTHEWEKHGTCAESEL-DQHDYFEAGLK 140

Query: 96  IFSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAK----KGVVKELWL 155
           +  K N+   L+ AG +  + + Y ++D+   IK      P I C K       + +++L
Sbjct: 141 LKQKANLLHALTNAG-IKPDDKFYEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYL 198

Query: 156 CFDKS 157
           C D S
Sbjct: 201 CVDTS 198

[Close]

BLAST of PI0008610 vs. ExPASy TrEMBL
Match: A0A0A0L0P9 (Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_4G109540 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.0e-85
Identity = 150/164 (91.46%), Postives = 157/164 (95.73%), Query Frame = 0


Query: 37  QINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTI 96
           +IN L EDIQKYWPTY+CGTTSTCH+TKGSFWAHEYEKHGTCAAP+IVGEYDYFLTT+TI
Sbjct: 104 EINILTEDIQKYWPTYRCGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITI 163

Query: 97  FSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEF-NATPKITCAKKGVVKELWLCFDK 156
           FSKYNVTKVLS+AGFVASNTEKYPIEDVVAAIKNEF NATPKI+CAKKG VKELWLCFDK
Sbjct: 164 FSKYNVTKVLSDAGFVASNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDK 223

Query: 157 SFEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII 200
           SFEPRDCNL NSC DFIK PTYEPQEPNKVEGAIPWIADVEEII
Sbjct: 224 SFEPRDCNLPNSCPDFIKFPTYEPQEPNKVEGAIPWIADVEEII 267

[Close]

BLAST of PI0008610 vs. ExPASy TrEMBL
Match: A0A1S3CHX1 (Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103501148 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 147/164 (89.63%), Postives = 157/164 (95.73%), Query Frame = 0


Query: 37  QINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTI 96
           +I  L EDIQKYWPTY+CGT+STCH+TKGSFWAHEYEKHGTCAAP++VGEYDYFLT LTI
Sbjct: 103 EIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEYEKHGTCAAPVLVGEYDYFLTALTI 162

Query: 97  FSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEF-NATPKITCAKKGVVKELWLCFDK 156
           FSKYNVTKVLSE GFVASNTEKYPIEDV+AAIKN+F NATPKITCAKKGVVKELWLCFDK
Sbjct: 163 FSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFYNATPKITCAKKGVVKELWLCFDK 222

Query: 157 SFEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII 200
           SFEPRDCNL++SC DFIKLPTYEPQEPNKVEGAIPWIADVEEII
Sbjct: 223 SFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWIADVEEII 266

[Close]

BLAST of PI0008610 vs. ExPASy TrEMBL
Match: A0A5A7V3T6 (Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00520 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.8e-81
Identity = 145/164 (88.41%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 37  QINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTI 96
           +I  L EDIQKYWPTY+CGT+STCH+TKGSFWAH  EKHGTCAAP++VGEYDYFLT LTI
Sbjct: 103 EIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH--EKHGTCAAPVLVGEYDYFLTALTI 162

Query: 97  FSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEF-NATPKITCAKKGVVKELWLCFDK 156
           FSKYNVTKVLSE GFVASNTEKYPIEDV+AAIKN+F NATPKITCAKKGVVKELWLCFDK
Sbjct: 163 FSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFYNATPKITCAKKGVVKELWLCFDK 222

Query: 157 SFEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII 200
           SFEPRDCNL++SC DFIKLPTYEPQEPNKVEGAIPWIADVEEII
Sbjct: 223 SFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWIADVEEII 264

[Close]

BLAST of PI0008610 vs. ExPASy TrEMBL
Match: A0A6J1CGP7 (Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111011504 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.7e-76
Identity = 133/166 (80.12%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 34  SRLQINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTT 93
           S  +I +L +DIQKYWPTY+CGTTSTCH+TKGSFWAHEYEKHGTCAAP+IVGE+DYFLTT
Sbjct: 103 SENEILSLNKDIQKYWPTYRCGTTSTCHRTKGSFWAHEYEKHGTCAAPVIVGEFDYFLTT 162

Query: 94  LTIFSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAKKGVVKELWLCF 153
           LTIFSKYNVTKVL++AGFVAS+TEKY + DVVAA+++ FNATPKI+CAKKG VKELWLCF
Sbjct: 163 LTIFSKYNVTKVLNDAGFVASDTEKYALGDVVAAVQDAFNATPKISCAKKGAVKELWLCF 222

Query: 154 DKSFEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII 200
           DK+F+PRDC+L NSC DFIKLPTYEPQE NKVEGAIPW+ D E II
Sbjct: 223 DKTFQPRDCDLANSCPDFIKLPTYEPQEANKVEGAIPWMGDAEAII 268

[Close]

BLAST of PI0008610 vs. ExPASy TrEMBL
Match: A0A6J1EA39 (Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111430737 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 9.6e-75
Identity = 132/168 (78.57%), Postives = 149/168 (88.69%), Query Frame = 0


Query: 32  IHSRLQINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFL 91
           + S+ +I  L EDI+KYWPTY+CGTTS CH TKGSFWAHEYEKHGTCAAP+IVGE+DYFL
Sbjct: 100 VFSQNEITLLKEDIEKYWPTYRCGTTSNCHGTKGSFWAHEYEKHGTCAAPVIVGEFDYFL 159

Query: 92  TTLTIFSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAKKGVVKELWL 151
           TTLTIFSKYNVTK LS+AGFVASNTEKYP+EDVV A+KN  N+TPKI+CAKKG VKELW+
Sbjct: 160 TTLTIFSKYNVTKALSDAGFVASNTEKYPLEDVVDAVKNATNSTPKISCAKKGAVKELWI 219

Query: 152 CFDKSFEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII 200
           CFDK FEPRDC+L NSC +FIKLPTYEPQ+   VEGAIPWIAD EE+I
Sbjct: 220 CFDKKFEPRDCDLANSCPEFIKLPTYEPQD--VVEGAIPWIADAEELI 265

[Close]

BLAST of PI0008610 vs. NCBI nr
Match: XP_038876700.1 (ribonuclease 2-like [Benincasa hispida])

HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85
Identity = 148/163 (90.80%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 37  QINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTI 96
           +IN L EDIQKYWPTY+CGTTSTCH+TKGSFWAHEYEKHGTCAAP+IVGEYDYFLTTLTI
Sbjct: 105 EINILAEDIQKYWPTYRCGTTSTCHRTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTLTI 164

Query: 97  FSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAKKGVVKELWLCFDKS 156
           FSKYNVTKVL++AGFVASNTEKYPIEDVVAAIKNEFN+TPKITCAKKGVVKELW+CFDKS
Sbjct: 165 FSKYNVTKVLNDAGFVASNTEKYPIEDVVAAIKNEFNSTPKITCAKKGVVKELWICFDKS 224

Query: 157 FEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII 200
           FEPRDC+L+NSC DFIKLPTY+PQEPNKVEGAIPWIAD EEII
Sbjct: 225 FEPRDCDLQNSCPDFIKLPTYDPQEPNKVEGAIPWIADAEEII 267

[Close]

BLAST of PI0008610 vs. NCBI nr
Match: XP_004137162.1 (ribonuclease 2 [Cucumis sativus])

HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84
Identity = 150/164 (91.46%), Postives = 157/164 (95.73%), Query Frame = 0


Query: 37  QINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTI 96
           +IN L EDIQKYWPTY+CGTTSTCH+TKGSFWAHEYEKHGTCAAP+IVGEYDYFLTT+TI
Sbjct: 104 EINILTEDIQKYWPTYRCGTTSTCHQTKGSFWAHEYEKHGTCAAPVIVGEYDYFLTTITI 163

Query: 97  FSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEF-NATPKITCAKKGVVKELWLCFDK 156
           FSKYNVTKVLS+AGFVASNTEKYPIEDVVAAIKNEF NATPKI+CAKKG VKELWLCFDK
Sbjct: 164 FSKYNVTKVLSDAGFVASNTEKYPIEDVVAAIKNEFNNATPKISCAKKGAVKELWLCFDK 223

Query: 157 SFEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII 200
           SFEPRDCNL NSC DFIK PTYEPQEPNKVEGAIPWIADVEEII
Sbjct: 224 SFEPRDCNLPNSCPDFIKFPTYEPQEPNKVEGAIPWIADVEEII 267

[Close]

BLAST of PI0008610 vs. NCBI nr
Match: XP_008462866.1 (PREDICTED: ribonuclease 2-like [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 147/164 (89.63%), Postives = 157/164 (95.73%), Query Frame = 0


Query: 37  QINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTI 96
           +I  L EDIQKYWPTY+CGT+STCH+TKGSFWAHEYEKHGTCAAP++VGEYDYFLT LTI
Sbjct: 103 EIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAHEYEKHGTCAAPVLVGEYDYFLTALTI 162

Query: 97  FSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEF-NATPKITCAKKGVVKELWLCFDK 156
           FSKYNVTKVLSE GFVASNTEKYPIEDV+AAIKN+F NATPKITCAKKGVVKELWLCFDK
Sbjct: 163 FSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFYNATPKITCAKKGVVKELWLCFDK 222

Query: 157 SFEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII 200
           SFEPRDCNL++SC DFIKLPTYEPQEPNKVEGAIPWIADVEEII
Sbjct: 223 SFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWIADVEEII 266

[Close]

BLAST of PI0008610 vs. NCBI nr
Match: KAA0061176.1 (ribonuclease 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 310.1 bits (793), Expect = 1.4e-80
Identity = 145/164 (88.41%), Postives = 155/164 (94.51%), Query Frame = 0


Query: 37  QINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTI 96
           +I  L EDIQKYWPTY+CGT+STCH+TKGSFWAH  EKHGTCAAP++VGEYDYFLT LTI
Sbjct: 103 EIGILAEDIQKYWPTYRCGTSSTCHRTKGSFWAH--EKHGTCAAPVLVGEYDYFLTALTI 162

Query: 97  FSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEF-NATPKITCAKKGVVKELWLCFDK 156
           FSKYNVTKVLSE GFVASNTEKYPIEDV+AAIKN+F NATPKITCAKKGVVKELWLCFDK
Sbjct: 163 FSKYNVTKVLSEGGFVASNTEKYPIEDVIAAIKNKFYNATPKITCAKKGVVKELWLCFDK 222

Query: 157 SFEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII 200
           SFEPRDCNL++SC DFIKLPTYEPQEPNKVEGAIPWIADVEEII
Sbjct: 223 SFEPRDCNLQHSCPDFIKLPTYEPQEPNKVEGAIPWIADVEEII 264

[Close]

BLAST of PI0008610 vs. NCBI nr
Match: XP_022140985.1 (ribonuclease 2-like [Momordica charantia])

HSP 1 Score: 295.4 bits (755), Expect = 3.6e-76
Identity = 133/166 (80.12%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 34  SRLQINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTT 93
           S  +I +L +DIQKYWPTY+CGTTSTCH+TKGSFWAHEYEKHGTCAAP+IVGE+DYFLTT
Sbjct: 103 SENEILSLNKDIQKYWPTYRCGTTSTCHRTKGSFWAHEYEKHGTCAAPVIVGEFDYFLTT 162

Query: 94  LTIFSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAKKGVVKELWLCF 153
           LTIFSKYNVTKVL++AGFVAS+TEKY + DVVAA+++ FNATPKI+CAKKG VKELWLCF
Sbjct: 163 LTIFSKYNVTKVLNDAGFVASDTEKYALGDVVAAVQDAFNATPKISCAKKGAVKELWLCF 222

Query: 154 DKSFEPRDCNLKNSCADFIKLPTYEPQEPNKVEGAIPWIADVEEII 200
           DK+F+PRDC+L NSC DFIKLPTYEPQE NKVEGAIPW+ D E II
Sbjct: 223 DKTFQPRDCDLANSCPDFIKLPTYEPQEANKVEGAIPWMGDAEAII 268

[Close]

BLAST of PI0008610 vs. TAIR 10
Match: AT2G39780.1 (ribonuclease 2 )

HSP 1 Score: 171.0 bits (432), Expect = 9.5e-43
Identity = 73/149 (48.99%), Postives = 108/149 (72.48%), Query Frame = 0


Query: 37  QINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTI 96
           +I+TL++ ++KYWP+  CG+ S+C+  KGSFW HE+EKHGTC++P+   EY+YFLTTL +
Sbjct: 95  EISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCSSPVFHDEYNYFLTTLNL 154

Query: 97  FSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAKKGVVKELWLCFDKS 156
           + K+NVT VL +AG+VASN+EKYP+  +V AI+N F+ TP++ C K+  + E+ +CF K 
Sbjct: 155 YLKHNVTDVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVC-KRDAIDEIRICFYKD 214

Query: 157 FEPRDC------NLKNSCADFIKLPTYEP 180
           F+PRDC        + SC  ++ LP Y P
Sbjct: 215 FKPRDCVGSQDLTSRKSCPKYVSLPEYTP 242

[Close]

BLAST of PI0008610 vs. TAIR 10
Match: AT2G39780.2 (ribonuclease 2 )

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-24
Identity = 54/149 (36.24%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 37  QINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTI 96
           +I+TL++ ++KYWP+  CG+ S+C+  KGSFW HE                         
Sbjct: 95  EISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHE------------------------- 154

Query: 97  FSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAKKGVVKELWLCFDKS 156
                   VL +AG+VASN+EKYP+  +V AI+N F+ TP++ C K+  + E+ +CF K 
Sbjct: 155 -------DVLYQAGYVASNSEKYPLGGIVTAIQNAFHITPEVVC-KRDAIDEIRICFYKD 210

Query: 157 FEPRDC------NLKNSCADFIKLPTYEP 180
           F+PRDC        + SC  ++ LP Y P
Sbjct: 215 FKPRDCVGSQDLTSRKSCPKYVSLPEYTP 210

[Close]

BLAST of PI0008610 vs. TAIR 10
Match: AT2G02990.1 (ribonuclease 1 )

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-13
Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 38  INTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLTIF 97
           I+ L+  ++K WPT  C + S       +FW HE+EKHGTC+  +I  +++YF T L + 
Sbjct: 91  ISDLLTSMKKSWPTLACPSGS-----GEAFWEHEWEKHGTCSESVI-DQHEYFQTALNLK 150

Query: 98  SKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAKKG----VVKELWLCF 157
            K N+   L++AG +  + + Y +E +  +IK     TP + C + G     + +++LC 
Sbjct: 151 QKTNLLGALTKAG-INPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCV 206

[Close]

BLAST of PI0008610 vs. TAIR 10
Match: AT1G14220.1 (Ribonuclease T2 family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 38/126 (30.16%), Postives = 67/126 (53.17%), Query Frame = 0


Query: 35  RLQINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTL 94
           R QI+ L+  ++K WPT  C +         +FW HE+EKHGTC+   ++ +++YF   L
Sbjct: 86  RSQISDLVSSLKKNWPTLSCPSNEGF-----NFWEHEWEKHGTCSES-VMDQHEYFENAL 145

Query: 95  TIFSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAK----KGVVKELW 154
            +  K N+ ++L  +G +  +   Y ++ +  AIK+    TP I C K       + +++
Sbjct: 146 KLKQKANLLQILKNSG-INPDDGFYNLDKITNAIKDGIGFTPGIECNKDPERNAQLHQIY 204

Query: 155 LCFDKS 157
           +C D S
Sbjct: 206 ICVDTS 204

[Close]

BLAST of PI0008610 vs. TAIR 10
Match: AT1G26820.1 (ribonuclease 3 )

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-12
Identity = 40/125 (32.00%), Postives = 64/125 (51.20%), Query Frame = 0


Query: 36  LQINTLIEDIQKYWPTYQCGTTSTCHKTKGSFWAHEYEKHGTCAAPIIVGEYDYFLTTLT 95
           L+++ L+ D+Q+ WPT  C +          FW HE+EKHGTCA   +  ++DYF   L 
Sbjct: 81  LRVSDLMSDLQREWPTLSCPSNDGM-----KFWTHEWEKHGTCAESEL-DQHDYFEAGLK 140

Query: 96  IFSKYNVTKVLSEAGFVASNTEKYPIEDVVAAIKNEFNATPKITCAK----KGVVKELWL 155
           +  K N+   L+ AG +  + + Y ++D+   IK      P I C K       + +++L
Sbjct: 141 LKQKANLLHALTNAG-IKPDDKFYEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYL 198

Query: 156 CFDKS 157
           C D S
Sbjct: 201 CVDTS 198

The following BLAST results are available for this feature:

BLAST of PI0008610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42814	1.3e-41	48.99	Ribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=RNS2 PE=2 SV=1	[more]
Q7M456	5.7e-16	35.34	Ribonuclease Oy OS=Crassostrea gigas OX=29159 PE=1 SV=1	[more]
P80022	2.2e-12	28.29	Extracellular ribonuclease LE OS=Solanum lycopersicum OX=4081 PE=1 SV=2	[more]
P42813	2.9e-12	32.52	Ribonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=RNS1 PE=1 SV=1	[more]
P42815	2.5e-11	32.00	Ribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=RNS3 PE=2 SV=1	[more]

BLAST of PI0008610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0P9	6.0e-85	91.46	Ribonuclease T(2) OS=Cucumis sativus OX=3659 GN=Csa_4G109540 PE=3 SV=1	[more]
A0A1S3CHX1	1.1e-83	89.63	Ribonuclease T(2) OS=Cucumis melo OX=3656 GN=LOC103501148 PE=3 SV=1	[more]
A0A5A7V3T6	6.8e-81	88.41	Ribonuclease T(2) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00...	[more]
A0A6J1CGP7	1.7e-76	80.12	Ribonuclease T(2) OS=Momordica charantia OX=3673 GN=LOC111011504 PE=3 SV=1	[more]
A0A6J1EA39	9.6e-75	78.57	Ribonuclease T(2) OS=Cucurbita moschata OX=3662 GN=LOC111430737 PE=3 SV=1	[more]

BLAST of PI0008610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876700.1	1.1e-85	90.80	ribonuclease 2-like [Benincasa hispida]	[more]
XP_004137162.1	1.2e-84	91.46	ribonuclease 2 [Cucumis sativus]	[more]
XP_008462866.1	2.3e-83	89.63	PREDICTED: ribonuclease 2-like [Cucumis melo]	[more]
KAA0061176.1	1.4e-80	88.41	ribonuclease 2-like [Cucumis melo var. makuwa]	[more]
XP_022140985.1	3.6e-76	80.12	ribonuclease 2-like [Momordica charantia]	[more]

BLAST of PI0008610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39780.1	9.5e-43	48.99	ribonuclease 2	[more]
AT2G39780.2	2.6e-24	36.24	ribonuclease 2	[more]
AT2G02990.1	2.1e-13	32.52	ribonuclease 1	[more]
AT1G14220.1	1.3e-12	30.16	Ribonuclease T2 family protein	[more]
AT1G26820.1	1.8e-12	32.00	ribonuclease 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036430	Ribonuclease T2-like superfamily	GENE3D	3.90.730.10		coord: 12..179 e-value: 4.4E-46 score: 159.5
IPR036430	Ribonuclease T2-like superfamily	SUPERFAMILY	55895	Ribonuclease Rh-like	coord: 35..176
IPR001568	Ribonuclease T2-like	PFAM	PF00445	Ribonuclease_T2	coord: 35..162 e-value: 5.6E-32 score: 111.4
IPR001568	Ribonuclease T2-like	PANTHER	PTHR11240	RIBONUCLEASE T2	coord: 35..165
None	No IPR available	PANTHER	PTHR11240:SF51	RIBONUCLEASE 2	coord: 35..165
IPR033130	Ribonuclease T2, His active site 2	PROSITE	PS00531	RNASE_T2_2	coord: 67..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008610.2	PI0008610.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006401	RNA catabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane
molecular_function	GO:0033897	ribonuclease T2 activity
molecular_function	GO:0003723	RNA binding