PI0008473 (gene) Melon (PI 482460) v1

Overview


Name	PI0008473
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 14969464 .. 14970210 (-)
RNA-Seq Expression	PI0008473
Synteny	PI0008473

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAGTCTAAAAAATACACCATGCGGCAAGGACTATGCTACGCGAGAAGACGTCCAATGCGGGCTCCTCGGCGAACAAGGCTACGCGGCAAGAGAAACAACCAGGCGAAGAGAAGGTCAGAAACCAGAACGCGGAGAAAGCCACAAACAAAACCGCAGAGGAAAGCTTACCTCGCGAACTAGGCTTTGCGAAGAAGGAATCTGGCGAGAAGACCTCAAGTCGCGGCGAGACAACCAGCTCGCGGACAACTCCTCAGCTTCGCGAGGTGACCTTTTGCTCGCGAACCACTTCACTACTCGGACGACAGCTGCAAAGGAAATCTTGCGGACAACCCTCGCGGACTTCCTTAGCTCGCGGACTTCACTCACTTCGCGAGCTACTCCGCCTCGCGAACAACTCCTCAAAACGCGAACAACTGAACTACCACGGGGAAGGATCTTACTTCACGGAAAGGAAAGACAACAAACGCGTAGGAAACTAAGGATGAGCGAAAAGAGGAAACTTGGACGGAAAGCTTACCGGAGAAGAAACCCAACGAACGGAGGAGTACTAAGCTTCGCGAGAGCAACTCGGAACGCCCAACTCAAAAAGCCAAAGCTTTCCGGCTGCAAGGACAAGCTGAGAACCTACGAACGGGGAGACGAAACGCGGCGGCAAGGAAAAAGCTGGGAGAGAGCTCCGGCGGCTGAGAGAATGCAAGGGAGAAGGAGAAGAGCTGGAAAAAGGAGAAATGAAAGGGTTTAA

mRNA sequence

ATGCCAAGTCTAAAAAATACACCATGCGGCAAGGACTATGCTACGCGAGAAGACGTCCAATGCGGGCTCCTCGGCGAACAAGGCTACGCGGCAAGAGAAACAACCAGGCGAAGAGAAGGTCAGAAACCAGAACGCGGAGAAAGCCACAAACAAAACCGCAGAGGAAAGCTTACCTCGCGAACTAGGCTTTGCGAAGAAGGAATCTGGCGAGAAGACCTCAAGTCGCGGCGAGACAACCAGCTCGCGGACAACTCCTCAGCTTCGCGAGGTGACCTTTTGCTCGCGAACCACTTCACTACTCGGACGACAGCTGCAAAGGAAATCTTGCGGACAACCCTCGCGGACTTCCTTAGCTCGCGGACTTCACTCACTTCGCGAGCTACTCCGCCTCGCGAACAACTCCTCAAAACGCGAACAACTGAACTACCACGGGGAAGGATCTTACTTCACGGAAAGGAAAGACAACAAACGCGTAGGAAACTAAGGATGAGCGAAAAGAGGAAACTTGGACGGAAAGCTTACCGGAGAAGAAACCCAACGAACGGAGGAGTACTAAGCTTCGCGAGAGCAACTCGGAACGCCCAACTCAAAAAGCCAAAGCTTTCCGGCTGCAAGGACAAGCTGAGAACCTACGAACGGGGAGACGAAACGCGGCGGCAAGGAAAAAGCTGGGAGAGAGCTCCGGCGGCTGAGAGAATGCAAGGGAGAAGGAGAAGAGCTGGAAAAAGGAGAAATGAAAGGGTTTAA

Coding sequence (CDS)

ATGCCAAGTCTAAAAAATACACCATGCGGCAAGGACTATGCTACGCGAGAAGACGTCCAATGCGGGCTCCTCGGCGAACAAGGCTACGCGGCAAGAGAAACAACCAGGCGAAGAGAAGGTCAGAAACCAGAACGCGGAGAAAGCCACAAACAAAACCGCAGAGGAAAGCTTACCTCGCGAACTAGGCTTTGCGAAGAAGGAATCTGGCGAGAAGACCTCAAGTCGCGGCGAGACAACCAGCTCGCGGACAACTCCTCAGCTTCGCGAGGTGACCTTTTGCTCGCGAACCACTTCACTACTCGGACGACAGCTGCAAAGGAAATCTTGCGGACAACCCTCGCGGACTTCCTTAGCTCGCGGACTTCACTCACTTCGCGAGCTACTCCGCCTCGCGAACAACTCCTCAAAACGCGAACAACTGAACTACCACGGGGAAGGATCTTACTTCACGGAAAGGAAAGACAACAAACGCGTAGGAAACTAAGGATGAGCGAAAAGAGGAAACTTGGACGGAAAGCTTACCGGAGAAGAAACCCAACGAACGGAGGAGTACTAAGCTTCGCGAGAGCAACTCGGAACGCCCAACTCAAAAAGCCAAAGCTTTCCGGCTGCAAGGACAAGCTGAGAACCTACGAACGGGGAGACGAAACGCGGCGGCAAGGAAAAAGCTGGGAGAGAGCTCCGGCGGCTGAGAGAATGCAAGGGAGAAGGAGAAGAGCTGGAAAAAGGAGAAATGAAAGGGTTTAA

Protein sequence

MPSLKNTPCGKDYATREDVQCGLLGEQGYAARETTRRREGQKPERGESHKQNRRGKLTSRTRLCEEGIWREDLKSRRDNQLADNSSASRGDLLLANHFTTRTTAAKEILRTTLADFLSSRTSLTSRATPPREQLLKTRTTELPRGRILLHGKERQQTRRKLRMSEKRKLGRKAYRRRNPTNGGVLSFARATRNAQLKKPKLSGCKDKLRTYERGDETRRQGKSWERAPAAERMQGRRRRAGKRRNERV

Homology

The following BLAST results are available for this feature:

BLAST of PI0008473 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008473 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008473 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008473 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008473.1	PI0008473.1	mRNA