PI0008469 (gene) Melon (PI 482460) v1

Overview


Name	PI0008469
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Beta-galactosidase
Location	chr05: 11024055 .. 11024873 (-)
RNA-Seq Expression	PI0008469
Synteny	PI0008469

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCAGAGCGGGGTAAAGATAAAACCCTAGACACCGAATATGAGGAAACCAGAGCTAACCACGAGTCTTCTGCTGTCGCTGATATGAATGCCGCCGTGGACGCCGCCGTCGTCGCCGCCGTTGACACCGCCATGGAAAAAGTAGTCCAGCAGCTTCAGAAGATGCCGGCGGTCACGTTTGCCACCTCCGCGGAGTCGTCCGGTCAGCAGCCGTCTGTGAGTCTCACTGTCCAGATGAATGGATTCGCCTTGCCGCCGCCAGTCCAACGGTCTAACCCTTCTGCCAATACGCACGCTCACGTGCCGCCGCTGCCCTCTGACCATGGACAACCGCCTATTCCGACTACCCAGCCGCTGTTGTCTGTTAATCCTTCACAGCAGCCTTACTTCGGCGAGACCTCGGCACAATCCAAAAACCCGGTAACGTCATTCCCTACTCGAACATCAAACTTTATAACTGGTTCTATGGTTCCCTCCACAGGTAATTTTTCAGGAGAAAAATTGAATGGCCAGAATTTTTTCTCTTGGTCTCAATCGATCAAGATGTTTCTTGAGGGACGCCAACAATTTGGGTTTATGACTGGTGAGATTCCCCGTCCTCTGCCTGGCAATGATCAAGAACGCCTTTGGAGAGCAGAGGACTTCTTTATTCGGTCCATGCTAATCAATAGTATGGAATCTCAAATAGGCAAGTCGCTCCTGTATGCTGCTACTGCAAGGGATCTCTGGGACTCCACTCAGAAACTTTACTCGAAACGTCAGAATGTTTCCCGTCTGCATACCTTGAGAAAACAAGTCCATGAATGCAAGCAATGA

mRNA sequence

ATGGTATCAGAGCGGGGTAAAGATAAAACCCTAGACACCGAATATGAGGAAACCAGAGCTAACCACGAGTCTTCTGCTGTCGCTGATATGAATGCCGCCGTGGACGCCGCCGTCGTCGCCGCCGTTGACACCGCCATGGAAAAAGTAGTCCAGCAGCTTCAGAAGATGCCGGCGGTCACGTTTGCCACCTCCGCGGAGTCGTCCGGTCAGCAGCCGTCTGTGAGTCTCACTGTCCAGATGAATGGATTCGCCTTGCCGCCGCCAGTCCAACGGTCTAACCCTTCTGCCAATACGCACGCTCACGTGCCGCCGCTGCCCTCTGACCATGGACAACCGCCTATTCCGACTACCCAGCCGCTGTTGTCTGTTAATCCTTCACAGCAGCCTTACTTCGGCGAGACCTCGGCACAATCCAAAAACCCGGTAACGTCATTCCCTACTCGAACATCAAACTTTATAACTGGTTCTATGGTTCCCTCCACAGGTAATTTTTCAGGAGAAAAATTGAATGGCCAGAATTTTTTCTCTTGGTCTCAATCGATCAAGATGTTTCTTGAGGGACGCCAACAATTTGGGTTTATGACTGGTGAGATTCCCCGTCCTCTGCCTGGCAATGATCAAGAACGCCTTTGGAGAGCAGAGGACTTCTTTATTCGGTCCATGCTAATCAATAGTATGGAATCTCAAATAGGCAAGTCGCTCCTGTATGCTGCTACTGCAAGGGATCTCTGGGACTCCACTCAGAAACTTTACTCGAAACGTCAGAATGTTTCCCGTCTGCATACCTTGAGAAAACAAGTCCATGAATGCAAGCAATGA

Coding sequence (CDS)

ATGGTATCAGAGCGGGGTAAAGATAAAACCCTAGACACCGAATATGAGGAAACCAGAGCTAACCACGAGTCTTCTGCTGTCGCTGATATGAATGCCGCCGTGGACGCCGCCGTCGTCGCCGCCGTTGACACCGCCATGGAAAAAGTAGTCCAGCAGCTTCAGAAGATGCCGGCGGTCACGTTTGCCACCTCCGCGGAGTCGTCCGGTCAGCAGCCGTCTGTGAGTCTCACTGTCCAGATGAATGGATTCGCCTTGCCGCCGCCAGTCCAACGGTCTAACCCTTCTGCCAATACGCACGCTCACGTGCCGCCGCTGCCCTCTGACCATGGACAACCGCCTATTCCGACTACCCAGCCGCTGTTGTCTGTTAATCCTTCACAGCAGCCTTACTTCGGCGAGACCTCGGCACAATCCAAAAACCCGGTAACGTCATTCCCTACTCGAACATCAAACTTTATAACTGGTTCTATGGTTCCCTCCACAGGTAATTTTTCAGGAGAAAAATTGAATGGCCAGAATTTTTTCTCTTGGTCTCAATCGATCAAGATGTTTCTTGAGGGACGCCAACAATTTGGGTTTATGACTGGTGAGATTCCCCGTCCTCTGCCTGGCAATGATCAAGAACGCCTTTGGAGAGCAGAGGACTTCTTTATTCGGTCCATGCTAATCAATAGTATGGAATCTCAAATAGGCAAGTCGCTCCTGTATGCTGCTACTGCAAGGGATCTCTGGGACTCCACTCAGAAACTTTACTCGAAACGTCAGAATGTTTCCCGTCTGCATACCTTGAGAAAACAAGTCCATGAATGCAAGCAATGA

Protein sequence

MVSERGKDKTLDTEYEETRANHESSAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMPAVTFATSAESSGQQPSVSLTVQMNGFALPPPVQRSNPSANTHAHVPPLPSDHGQPPIPTTQPLLSVNPSQQPYFGETSAQSKNPVTSFPTRTSNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFMTGEIPRPLPGNDQERLWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKLYSKRQNVSRLHTLRKQVHECKQ

Homology

[Close]

BLAST of PI0008469 vs. ExPASy TrEMBL
Match: A0A5D3DJM7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00420 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 3.1e-60
Identity = 166/322 (51.55%), Postives = 186/322 (57.76%), Query Frame = 0


Query: 1   MVSERGKDKTLDTEYEETRANHESSAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMP--- 60
           MVSE+  ++TL+    ET+   E  A A   AAVDAAV AAV    EK++Q LQK P   
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPVAAA-AAAAVDAAVAAAV----EKLLQNLQKPPIYP 60

Query: 61  --------AVTF--------ATSAESSGQQPSVSLTVQMNGFALPPPVQRSNPSANTHAH 120
                   A  F          S   +   P   +T     F  P  VQ SNPS + H H
Sbjct: 61  TGVVPQPYAPPFDQKLIHAPLVSGAWAHAPPPFHVTAHPVPFYAPSDVQPSNPSGHPHPH 120

Query: 121 VPPLPSDHGQPPI----------------PTTQPLLSVNPSQQPY------FGETSAQ-- 180
            P   S  GQ P                 P  QPL S N   QP        GE+S    
Sbjct: 121 APSTSS--GQHPSTVNLSNQYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSK 180

Query: 181 -------SKNPVTSFPTRTSNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQ 240
                  SKNPVTSFP   SN+ITGS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR Q
Sbjct: 181 PTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQ 240

Query: 241 FGFMTGEIPRPLPGNDQERLWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKL 273
           FGF+TGEI RP PG+  ERLW+ ED  IRSMLINSME QIGK LLYA TA+DLWD+TQ L
Sbjct: 241 FGFLTGEIVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYATTAKDLWDTTQTL 300

[Close]

BLAST of PI0008469 vs. ExPASy TrEMBL
Match: A0A5A7V3J5 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00020 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 9.1e-60
Identity = 162/322 (50.31%), Postives = 184/322 (57.14%), Query Frame = 0


Query: 1   MVSERGKDKTLDTEYEETRANHESSAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMP--- 60
           MVSE+  ++TL+    ET+   E        AA  A + AAVD A+EK++Q LQK P   
Sbjct: 1   MVSEQSNNETLENNLGETQIETERVTA----AAAAAGIAAAVDAAVEKLLQNLQKPPIYP 60

Query: 61  -AVTFATSAESSGQQ---------------PSVSLTVQMNGFALPPPVQRSNPSANTHAH 120
             V     A  S Q+               P   +T     F  P  VQ SNPS + H H
Sbjct: 61  TGVVPQPYASPSDQKLIHAPLVSGVWAHAPPPFHVTAHPVPFYAPLDVQPSNPSGHPHPH 120

Query: 121 VPPLPSDHGQPPI----------------PTTQPLLSVNPSQQPY------FGETSAQ-- 180
            P   S  GQ P                 P  QPL S N   QP        GE+S    
Sbjct: 121 APSTSS--GQHPSTVNLSNQYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSK 180

Query: 181 -------SKNPVTSFPTRTSNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQ 240
                  SKNP TSFP   SN+ITGS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR Q
Sbjct: 181 PTELPMYSKNPETSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQ 240

Query: 241 FGFMTGEIPRPLPGNDQERLWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKL 273
           FGF+TGE  RP PG+  ERLW+ ED  IRSMLINSME QIGK LLYAATA+DLWD+TQ L
Sbjct: 241 FGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKDLWDTTQTL 300

[Close]

BLAST of PI0008469 vs. ExPASy TrEMBL
Match: A0A5D3CIR0 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00930 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.6e-59
Identity = 162/321 (50.47%), Postives = 185/321 (57.63%), Query Frame = 0


Query: 3   SERGKDKTLDTEYEETRANHES-SAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMP---- 62
           SE+  ++TL+    ET+   +  +A A   A + AAV AAV  AMEK++Q LQK P    
Sbjct: 354 SEQSNNETLENNLGETQIETDPVTAAAAAAAGISAAVDAAVAAAMEKLLQNLQKPPIYPT 413

Query: 63  -------AVTF--------ATSAESSGQQPSVSLTVQMNGFALPPPVQRSNPSANTHAHV 122
                  A  F          S   +   P   +T     F  P  VQ SNPS + H H 
Sbjct: 414 GVVPQPYAPPFDQKLIHAPLVSGAWAHAPPPFHVTAHPVPFYAPSDVQPSNPSGHPHPHA 473

Query: 123 PPLPSDHGQPPI----------------PTTQPLLSVNPSQQPY------FGETSAQ--- 182
           P   S  GQ P                 P  QPL S N   QP        GE+S     
Sbjct: 474 PSTSS--GQHPSTVNLSNQYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSKP 533

Query: 183 ------SKNPVTSFPTRTSNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQF 242
                 SKNPVTSFP   SN+ITGS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QF
Sbjct: 534 TELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQF 593

Query: 243 GFMTGEIPRPLPGNDQERLWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKLY 273
           GF+TGEI RP PG+  ERLW+ ED  IRSMLINSME QIGK LLYA TA+DLWD+TQ LY
Sbjct: 594 GFLTGEIVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYATTAKDLWDTTQTLY 653

[Close]

BLAST of PI0008469 vs. ExPASy TrEMBL
Match: A0A5D3BIZ4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001820 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 4.5e-59
Identity = 155/303 (51.16%), Postives = 176/303 (58.09%), Query Frame = 0


Query: 1   MVSERGKDKTLDTEYEETRANHESSAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMPAVT 60
           MVSE+  ++TL+    ET+   E    A                AMEK++Q LQK P   
Sbjct: 1   MVSEQSNNETLENNLGETQIKTEPVTAA---------------AAMEKLLQNLQKPP--I 60

Query: 61  FATSAESSGQQPSVSLTVQMNGFALPPPVQRSNPSANTHAHVPPLPSDHGQPPI------ 120
           + T    +   P   +T     F  P  VQ SNPS + H H P   S  GQ P       
Sbjct: 61  YPTGVAHA--PPPFHVTAHPVPFYAPSDVQPSNPSGHPHPHAPSTSS--GQHPSTVNLSN 120

Query: 121 ----------PTTQPLLSVNPSQQPY------FGETSAQ---------SKNPVTSFPTRT 180
                     P  QPL S N   QP        GE+S           SKNPVTSFP   
Sbjct: 121 QYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSKPTELPMYSKNPVTSFPNSQ 180

Query: 181 SNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFMTGEIPRPLPGNDQER 240
           SN+ITGS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGF+TGEI RP PG+  ER
Sbjct: 181 SNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQFGFLTGEIVRPPPGDALER 240

Query: 241 LWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKLYSKRQNVSRLHTLRKQVHE 273
           LW+ ED  IRSMLINSME QIGK LLYA TA+DLWD+TQ LYSKRQN SRL+TLRKQVH 
Sbjct: 241 LWKGEDSLIRSMLINSMEPQIGKPLLYATTAKDLWDTTQTLYSKRQNASRLYTLRKQVHN 282

[Close]

BLAST of PI0008469 vs. ExPASy TrEMBL
Match: A0A5D3E603 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003080 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 6.5e-58
Identity = 159/322 (49.38%), Postives = 179/322 (55.59%), Query Frame = 0


Query: 1   MVSERGKDKTLDTEYEETRANHESSAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMP--- 60
           MVSE+  ++TL+    ET+   E  A A                AMEK++Q LQK P   
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPIAAA---------------AAMEKLLQNLQKPPIYP 60

Query: 61  -AVTFATSAESSGQQ---------------PSVSLTVQMNGFALPPPVQRSNPSANTHAH 120
             V     A  S Q+               P   +T     F  P  VQ SNPS + H H
Sbjct: 61  TGVVPQPYAPPSDQKTIHAPLVSGAWAHAPPPFHVTAHPVPFYAPSDVQPSNPSGHPHPH 120

Query: 121 VPPLPSDHGQPPI----------------PTTQPLLSVNPSQQPY------FGETSAQ-- 180
            P   S  GQ P                 P  QPL S N   QP        GE+S    
Sbjct: 121 APSTSS--GQHPSTVNLSNQYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSK 180

Query: 181 -------SKNPVTSFPTRTSNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQ 240
                  SKNPVTSFP   SN+ITGS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR Q
Sbjct: 181 PTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQ 240

Query: 241 FGFMTGEIPRPLPGNDQERLWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKL 273
           FGF+TGEI RP PG+  ERLW+ ED  IRSMLINSME QIGK LLYA TA+DLWD+TQ L
Sbjct: 241 FGFLTGEIVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYATTAKDLWDTTQTL 300

[Close]

BLAST of PI0008469 vs. NCBI nr
Match: TYK23439.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 241.9 bits (616), Expect = 6.5e-60
Identity = 166/322 (51.55%), Postives = 186/322 (57.76%), Query Frame = 0


Query: 1   MVSERGKDKTLDTEYEETRANHESSAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMP--- 60
           MVSE+  ++TL+    ET+   E  A A   AAVDAAV AAV    EK++Q LQK P   
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPVAAA-AAAAVDAAVAAAV----EKLLQNLQKPPIYP 60

Query: 61  --------AVTF--------ATSAESSGQQPSVSLTVQMNGFALPPPVQRSNPSANTHAH 120
                   A  F          S   +   P   +T     F  P  VQ SNPS + H H
Sbjct: 61  TGVVPQPYAPPFDQKLIHAPLVSGAWAHAPPPFHVTAHPVPFYAPSDVQPSNPSGHPHPH 120

Query: 121 VPPLPSDHGQPPI----------------PTTQPLLSVNPSQQPY------FGETSAQ-- 180
            P   S  GQ P                 P  QPL S N   QP        GE+S    
Sbjct: 121 APSTSS--GQHPSTVNLSNQYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSK 180

Query: 181 -------SKNPVTSFPTRTSNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQ 240
                  SKNPVTSFP   SN+ITGS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR Q
Sbjct: 181 PTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQ 240

Query: 241 FGFMTGEIPRPLPGNDQERLWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKL 273
           FGF+TGEI RP PG+  ERLW+ ED  IRSMLINSME QIGK LLYA TA+DLWD+TQ L
Sbjct: 241 FGFLTGEIVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYATTAKDLWDTTQTL 300

[Close]

BLAST of PI0008469 vs. NCBI nr
Match: KAA0061447.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 240.4 bits (612), Expect = 1.9e-59
Identity = 162/322 (50.31%), Postives = 184/322 (57.14%), Query Frame = 0


Query: 1   MVSERGKDKTLDTEYEETRANHESSAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMP--- 60
           MVSE+  ++TL+    ET+   E        AA  A + AAVD A+EK++Q LQK P   
Sbjct: 1   MVSEQSNNETLENNLGETQIETERVTA----AAAAAGIAAAVDAAVEKLLQNLQKPPIYP 60

Query: 61  -AVTFATSAESSGQQ---------------PSVSLTVQMNGFALPPPVQRSNPSANTHAH 120
             V     A  S Q+               P   +T     F  P  VQ SNPS + H H
Sbjct: 61  TGVVPQPYASPSDQKLIHAPLVSGVWAHAPPPFHVTAHPVPFYAPLDVQPSNPSGHPHPH 120

Query: 121 VPPLPSDHGQPPI----------------PTTQPLLSVNPSQQPY------FGETSAQ-- 180
            P   S  GQ P                 P  QPL S N   QP        GE+S    
Sbjct: 121 APSTSS--GQHPSTVNLSNQYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSK 180

Query: 181 -------SKNPVTSFPTRTSNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQ 240
                  SKNP TSFP   SN+ITGS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR Q
Sbjct: 181 PTELPMYSKNPETSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQ 240

Query: 241 FGFMTGEIPRPLPGNDQERLWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKL 273
           FGF+TGE  RP PG+  ERLW+ ED  IRSMLINSME QIGK LLYAATA+DLWD+TQ L
Sbjct: 241 FGFLTGETVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYAATAKDLWDTTQTL 300

[Close]

BLAST of PI0008469 vs. NCBI nr
Match: TYK11240.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 239.6 bits (610), Expect = 3.2e-59
Identity = 162/321 (50.47%), Postives = 185/321 (57.63%), Query Frame = 0


Query: 3   SERGKDKTLDTEYEETRANHES-SAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMP---- 62
           SE+  ++TL+    ET+   +  +A A   A + AAV AAV  AMEK++Q LQK P    
Sbjct: 354 SEQSNNETLENNLGETQIETDPVTAAAAAAAGISAAVDAAVAAAMEKLLQNLQKPPIYPT 413

Query: 63  -------AVTF--------ATSAESSGQQPSVSLTVQMNGFALPPPVQRSNPSANTHAHV 122
                  A  F          S   +   P   +T     F  P  VQ SNPS + H H 
Sbjct: 414 GVVPQPYAPPFDQKLIHAPLVSGAWAHAPPPFHVTAHPVPFYAPSDVQPSNPSGHPHPHA 473

Query: 123 PPLPSDHGQPPI----------------PTTQPLLSVNPSQQPY------FGETSAQ--- 182
           P   S  GQ P                 P  QPL S N   QP        GE+S     
Sbjct: 474 PSTSS--GQHPSTVNLSNQYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSKP 533

Query: 183 ------SKNPVTSFPTRTSNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQF 242
                 SKNPVTSFP   SN+ITGS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QF
Sbjct: 534 TELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQF 593

Query: 243 GFMTGEIPRPLPGNDQERLWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKLY 273
           GF+TGEI RP PG+  ERLW+ ED  IRSMLINSME QIGK LLYA TA+DLWD+TQ LY
Sbjct: 594 GFLTGEIVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYATTAKDLWDTTQTLY 653

[Close]

BLAST of PI0008469 vs. NCBI nr
Match: TYJ98979.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 238.0 bits (606), Expect = 9.3e-59
Identity = 155/303 (51.16%), Postives = 176/303 (58.09%), Query Frame = 0


Query: 1   MVSERGKDKTLDTEYEETRANHESSAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMPAVT 60
           MVSE+  ++TL+    ET+   E    A                AMEK++Q LQK P   
Sbjct: 1   MVSEQSNNETLENNLGETQIKTEPVTAA---------------AAMEKLLQNLQKPP--I 60

Query: 61  FATSAESSGQQPSVSLTVQMNGFALPPPVQRSNPSANTHAHVPPLPSDHGQPPI------ 120
           + T    +   P   +T     F  P  VQ SNPS + H H P   S  GQ P       
Sbjct: 61  YPTGVAHA--PPPFHVTAHPVPFYAPSDVQPSNPSGHPHPHAPSTSS--GQHPSTVNLSN 120

Query: 121 ----------PTTQPLLSVNPSQQPY------FGETSAQ---------SKNPVTSFPTRT 180
                     P  QPL S N   QP        GE+S           SKNPVTSFP   
Sbjct: 121 QYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSKPTELPMYSKNPVTSFPNSQ 180

Query: 181 SNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQFGFMTGEIPRPLPGNDQER 240
           SN+ITGS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR QFGF+TGEI RP PG+  ER
Sbjct: 181 SNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQFGFLTGEIVRPPPGDALER 240

Query: 241 LWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKLYSKRQNVSRLHTLRKQVHE 273
           LW+ ED  IRSMLINSME QIGK LLYA TA+DLWD+TQ LYSKRQN SRL+TLRKQVH 
Sbjct: 241 LWKGEDSLIRSMLINSMEPQIGKPLLYATTAKDLWDTTQTLYSKRQNASRLYTLRKQVHN 282

[Close]

BLAST of PI0008469 vs. NCBI nr
Match: TYK31050.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-57
Identity = 159/322 (49.38%), Postives = 179/322 (55.59%), Query Frame = 0


Query: 1   MVSERGKDKTLDTEYEETRANHESSAVADMNAAVDAAVVAAVDTAMEKVVQQLQKMP--- 60
           MVSE+  ++TL+    ET+   E  A A                AMEK++Q LQK P   
Sbjct: 1   MVSEQSNNETLENNLGETQIETEPIAAA---------------AAMEKLLQNLQKPPIYP 60

Query: 61  -AVTFATSAESSGQQ---------------PSVSLTVQMNGFALPPPVQRSNPSANTHAH 120
             V     A  S Q+               P   +T     F  P  VQ SNPS + H H
Sbjct: 61  TGVVPQPYAPPSDQKTIHAPLVSGAWAHAPPPFHVTAHPVPFYAPSDVQPSNPSGHPHPH 120

Query: 121 VPPLPSDHGQPPI----------------PTTQPLLSVNPSQQPY------FGETSAQ-- 180
            P   S  GQ P                 P  QPL S N   QP        GE+S    
Sbjct: 121 APSTSS--GQHPSTVNLSNQYSKQQLYVDPLQQPLFSGNGIDQPQNRSDIEAGESSTHSK 180

Query: 181 -------SKNPVTSFPTRTSNFITGSMVPSTGNFSGEKLNGQNFFSWSQSIKMFLEGRQQ 240
                  SKNPVTSFP   SN+ITGS+  STGNFSGEKLNGQN+FSWSQSIKMFLEGR Q
Sbjct: 181 PTELPMYSKNPVTSFPNSQSNYITGSLGSSTGNFSGEKLNGQNYFSWSQSIKMFLEGRYQ 240

Query: 241 FGFMTGEIPRPLPGNDQERLWRAEDFFIRSMLINSMESQIGKSLLYAATARDLWDSTQKL 273
           FGF+TGEI RP PG+  ERLW+ ED  IRSMLINSME QIGK LLYA TA+DLWD+TQ L
Sbjct: 241 FGFLTGEIVRPPPGDALERLWKGEDSLIRSMLINSMEPQIGKPLLYATTAKDLWDTTQTL 300

[Close]

BLAST of PI0008469 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-07
Identity = 29/112 (25.89%), Postives = 65/112 (58.04%), Query Frame = 0


Query: 163 NFSGEKL--NGQNFFSWSQSIKMFLEGRQQFGFMTGEIPRPLPGNDQERLWRAEDFFIRS 222
           +FS +KL  +  N+ +W    + FL   ++FGF+ G +P+P P +   + W   +  +  
Sbjct: 29  DFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPFSPLYQPWEQCNAMVMY 88

Query: 223 MLINSMESQIGKSLLYAATARDLWDSTQKLYSKRQNVSRLHTLRKQVHECKQ 273
            L+NSM  ++ +S++YA TA  +W+  ++++    ++ +++ LR+++   +Q
Sbjct: 89  WLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDL-KIYQLRRRLATLRQ 139

The following BLAST results are available for this feature:

BLAST of PI0008469 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008469 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJM7	3.1e-60	51.55	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G0...	[more]
A0A5A7V3J5	9.1e-60	50.31	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00...	[more]
A0A5D3CIR0	1.6e-59	50.47	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G0...	[more]
A0A5D3BIZ4	4.5e-59	51.16	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G0...	[more]
A0A5D3E603	6.5e-58	49.38	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G0...	[more]

BLAST of PI0008469 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23439.1	6.5e-60	51.55	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0061447.1	1.9e-59	50.31	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK11240.1	3.2e-59	50.47	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYJ98979.1	9.3e-59	51.16	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK31050.1	1.3e-57	49.38	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of PI0008469 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21280.1	1.4e-07	25.89	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029472	Retrotransposon Copia-like, N-terminal	PFAM	PF14244	Retrotran_gag_3	coord: 168..201 e-value: 6.4E-7 score: 29.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..100
None	No IPR available	PANTHER	PTHR37610	FAMILY NOT NAMED	coord: 158..272
None	No IPR available	PANTHER	PTHR37610:SF41	SUBFAMILY NOT NAMED	coord: 158..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008469.1	PI0008469.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003676	nucleic acid binding