PI0008454 (gene) Melon (PI 482460) v1

Overview


Name	PI0008454
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transmembrane protein
Location	chr11: 30668474 .. 30669427 (+)
RNA-Seq Expression	PI0008454
Synteny	PI0008454

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAGCCCCTACCTCGACATCCACACGATTCTTCAAATTTCTTTTATTTCTTCAAATTTGCTTTTCAATCTTTTGTTATGAGACTGTACTTATTCGTTTTTTGAAGAAAAGGGGTCATCGCAATGGTGGACGTCGAGGAGGAAAAGGGAGAAGATAAGTTAAATGGTGTTGCTAGTTCGAGTGAATTTTTGGGCAAATTGGAACAGAAGTACAAAGAAATCAAAGAGAATGCAGAAACATATCCTTATGTATGGGGATCATACATTGTTGTCTATGGCGGAATCTTTCTTTGGGCTGGGTATAGATGGAGAAAGCTTCGGAAGACGGAGGACAGAGTACGCATTTTACAAGAGAAGCTTCGACAGCATTATGAAGCAGAACAATCATCCATCAAACAATCAGCAAATTCAGTTGATAAAAATTCAACTCCTTCCAAGCAGTAGCCAGATTTTGAATAAGTTCTTCTTCGTCTAAAGATATTGGTTAGATTTTATATCTCATTTGTTCTGCTGTTAGGTTTTGATTTTGTTTTAATTTAATAGGGATCCCATTTCCATTGTTGACAAGTACACTGCTCTGTTGTAGTTCAAAATCAATTCTGCAATGCAAATTTAGGAGATAAAAGAATAATGTTTTACAATGACTGGAATGCTAGGTTGTGTTCTTAGTTTTCCACTGATGAAATTGAATACAAGGAAACCATTTGCTCAAATGTAATATGATTTGAGTGATTAGAGGCTTTGTTTCTCTTTATAGGCTGTAACTTCTTCAAATCTCTATCTGTTAACTCTTCTGTTTGTCATTCAAGTGTGTTTCGATTGACTTTGGTAGAGTGATTTAGTTGTTGTTTGGCTTTTCTTAGAGTTCTTAGAGAAAGTATCATTTCAGAATTCAGAATCAATGTTGCTCCCATTGGTTAATGATGAAGTTAGTAGATGAATATTTTTTGGATTT

mRNA sequence

CACAGCCCCTACCTCGACATCCACACGATTCTTCAAATTTCTTTTATTTCTTCAAATTTGCTTTTCAATCTTTTGTTATGAGACTGTACTTATTCGTTTTTTGAAGAAAAGGGGTCATCGCAATGGTGGACGTCGAGGAGGAAAAGGGAGAAGATAAGTTAAATGGTGTTGCTAGTTCGAGTGAATTTTTGGGCAAATTGGAACAGAAGTACAAAGAAATCAAAGAGAATGCAGAAACATATCCTTATGTATGGGGATCATACATTGTTGTCTATGGCGGAATCTTTCTTTGGGCTGGGTATAGATGGAGAAAGCTTCGGAAGACGGAGGACAGAGTACGCATTTTACAAGAGAAGCTTCGACAGCATTATGAAGCAGAACAATCATCCATCAAACAATCAGCAAATTCAGTTGATAAAAATTCAACTCCTTCCAAGCAGTAGCCAGATTTTGAATAAGTTCTTCTTCGTCTAAAGATATTGGTTAGATTTTATATCTCATTTGTTCTGCTGTTAGGTTTTGATTTTGTTTTAATTTAATAGGGATCCCATTTCCATTGTTGACAAGTACACTGCTCTGTTGTAGTTCAAAATCAATTCTGCAATGCAAATTTAGGAGATAAAAGAATAATGTTTTACAATGACTGGAATGCTAGGTTGTGTTCTTAGTTTTCCACTGATGAAATTGAATACAAGGAAACCATTTGCTCAAATGTAATATGATTTGAGTGATTAGAGGCTTTGTTTCTCTTTATAGGCTGTAACTTCTTCAAATCTCTATCTGTTAACTCTTCTGTTTGTCATTCAAGTGTGTTTCGATTGACTTTGGTAGAGTGATTTAGTTGTTGTTTGGCTTTTCTTAGAGTTCTTAGAGAAAGTATCATTTCAGAATTCAGAATCAATGTTGCTCCCATTGGTTAATGATGAAGTTAGTAGATGAATATTTTTTGGATTT

Coding sequence (CDS)

ATGGTGGACGTCGAGGAGGAAAAGGGAGAAGATAAGTTAAATGGTGTTGCTAGTTCGAGTGAATTTTTGGGCAAATTGGAACAGAAGTACAAAGAAATCAAAGAGAATGCAGAAACATATCCTTATGTATGGGGATCATACATTGTTGTCTATGGCGGAATCTTTCTTTGGGCTGGGTATAGATGGAGAAAGCTTCGGAAGACGGAGGACAGAGTACGCATTTTACAAGAGAAGCTTCGACAGCATTATGAAGCAGAACAATCATCCATCAAACAATCAGCAAATTCAGTTGATAAAAATTCAACTCCTTCCAAGCAGTAG

Protein sequence

MVDVEEEKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGYRWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ

Homology

[Close]

BLAST of PI0008454 vs. ExPASy TrEMBL
Match: A0A1S3CCY7 (uncharacterized protein LOC103499620 OS=Cucumis melo OX=3656 GN=LOC103499620 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.2e-45
Identity = 95/106 (89.62%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MVDVEEEKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGY 60
           MVD+EEEKG DKLNGV+SSS F GKL  KY+EIKENAE YPYVWGSYI+VYGG+FLWAGY
Sbjct: 1   MVDIEEEKGGDKLNGVSSSSSFSGKLVHKYREIKENAEKYPYVWGSYIIVYGGMFLWAGY 60

Query: 61  RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 107
           RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ
Sbjct: 61  RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 106

[Close]

BLAST of PI0008454 vs. ExPASy TrEMBL
Match: A0A5D3BSB4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00480 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.2e-45
Identity = 95/106 (89.62%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MVDVEEEKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGY 60
           MVD+EEEKG DKLNGV+SSS F GKL  KY+EIKENAE YPYVWGSYI+VYGG+FLWAGY
Sbjct: 1   MVDIEEEKGGDKLNGVSSSSSFSGKLVHKYREIKENAEKYPYVWGSYIIVYGGMFLWAGY 60

Query: 61  RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 107
           RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ
Sbjct: 61  RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 106

[Close]

BLAST of PI0008454 vs. ExPASy TrEMBL
Match: A0A6J1L783 (uncharacterized protein LOC111499806 OS=Cucurbita maxima OX=3661 GN=LOC111499806 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.1e-32
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 6  EEKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGYRWRKL 65
          ++K ED L   ASSS FLGKLE+KYKE+KENAETYPYVWGSYIVVYGG  LW GYRWRKL
Sbjct: 4  QKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 63

Query: 66 RKTEDRVRILQEKLRQHYEAEQSSIKQSANSV 98
          RKTEDRVR+LQEKLRQ YEAEQS+ KQSANSV
Sbjct: 64 RKTEDRVRVLQEKLRQRYEAEQSA-KQSANSV 94

[Close]

BLAST of PI0008454 vs. ExPASy TrEMBL
Match: A0A6J1G8F0 (uncharacterized protein LOC111451821 OS=Cucurbita moschata OX=3662 GN=LOC111451821 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.1e-32
Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 6  EEKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGYRWRKL 65
          ++K ED L   ASSS FLGKLE+KYKE+KENAETYPYVWGSYIVVYGG  LW GYRWRKL
Sbjct: 4  QKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 63

Query: 66 RKTEDRVRILQEKLRQHYEAEQSSIKQSANSV 98
          RKTEDRVR LQEKLRQ YEAEQS+ KQSANSV
Sbjct: 64 RKTEDRVRALQEKLRQRYEAEQSA-KQSANSV 94

[Close]

BLAST of PI0008454 vs. ExPASy TrEMBL
Match: A0A6J1D6P5 (uncharacterized protein LOC111017444 OS=Momordica charantia OX=3673 GN=LOC111017444 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28
Identity = 71/100 (71.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 7   EKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGYRWRKLR 66
           +K ED++   A+SS F+GKLEQKY+EIKENAETYPYVWGSYIVVYGG  LW GYRWRKLR
Sbjct: 5   KKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLR 64

Query: 67  KTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 107
           KTEDRVR LQEKLR+ YEAEQS+   S  SV+K+    KQ
Sbjct: 65  KTEDRVRXLQEKLRRRYEAEQSA--SSVASVEKDPPSVKQ 102

[Close]

BLAST of PI0008454 vs. NCBI nr
Match: XP_004147347.1 (uncharacterized protein LOC101213780 [Cucumis sativus] >KAE8651990.1 hypothetical protein Csa_016946 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 5.1e-45
Identity = 96/106 (90.57%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MVDVEEEKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGY 60
           MVDVEEE GEDKLNGVASSS F GKLE KY+EIKENAE YPYVWGSYIVVYGGIFLWAGY
Sbjct: 1   MVDVEEENGEDKLNGVASSSGFFGKLEHKYREIKENAEKYPYVWGSYIVVYGGIFLWAGY 60

Query: 61  RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 107
           RWRKLRKTEDRVRILQEKLR+HYEA++SSIKQSANSVDK STPSKQ
Sbjct: 61  RWRKLRKTEDRVRILQEKLRKHYEAQESSIKQSANSVDKTSTPSKQ 106

[Close]

BLAST of PI0008454 vs. NCBI nr
Match: XP_008460875.1 (PREDICTED: uncharacterized protein LOC103499620 [Cucumis melo] >XP_008460876.1 PREDICTED: uncharacterized protein LOC103499620 [Cucumis melo] >XP_008460877.1 PREDICTED: uncharacterized protein LOC103499620 [Cucumis melo] >KAA0040749.1 uncharacterized protein E6C27_scaffold703G00120 [Cucumis melo var. makuwa] >TYK02065.1 uncharacterized protein E5676_scaffold680G00480 [Cucumis melo var. makuwa])

HSP 1 Score: 190.7 bits (483), Expect = 6.6e-45
Identity = 95/106 (89.62%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 1   MVDVEEEKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGY 60
           MVD+EEEKG DKLNGV+SSS F GKL  KY+EIKENAE YPYVWGSYI+VYGG+FLWAGY
Sbjct: 1   MVDIEEEKGGDKLNGVSSSSSFSGKLVHKYREIKENAEKYPYVWGSYIIVYGGMFLWAGY 60

Query: 61  RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 107
           RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ
Sbjct: 61  RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 106

[Close]

BLAST of PI0008454 vs. NCBI nr
Match: XP_038900834.1 (uncharacterized protein LOC120087898 [Benincasa hispida])

HSP 1 Score: 172.6 bits (436), Expect = 1.9e-39
Identity = 88/106 (83.02%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 1   MVDVEEEKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGY 60
           MV++EEEK EDKL GVASS  FLGKLE+KY+EIKENAETYPYVWGSYIVVYGG  LW GY
Sbjct: 1   MVEIEEEKEEDKLYGVASSIGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGY 60

Query: 61  RWRKLRKTEDRVRILQEKLRQHYEAEQSSIKQSANSVDKNSTPSKQ 107
           RWRKLRKTEDRVR+LQEKLRQ YEAEQSS KQSANSV KN + SKQ
Sbjct: 61  RWRKLRKTEDRVRVLQEKLRQRYEAEQSSAKQSANSVHKNPSSSKQ 106

[Close]

BLAST of PI0008454 vs. NCBI nr
Match: XP_023007268.1 (uncharacterized protein LOC111499806 [Cucurbita maxima])

HSP 1 Score: 147.5 bits (371), Expect = 6.5e-32
Identity = 75/92 (81.52%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 6  EEKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGYRWRKL 65
          ++K ED L   ASSS FLGKLE+KYKE+KENAETYPYVWGSYIVVYGG  LW GYRWRKL
Sbjct: 4  QKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 63

Query: 66 RKTEDRVRILQEKLRQHYEAEQSSIKQSANSV 98
          RKTEDRVR+LQEKLRQ YEAEQS+ KQSANSV
Sbjct: 64 RKTEDRVRVLQEKLRQRYEAEQSA-KQSANSV 94

[Close]

BLAST of PI0008454 vs. NCBI nr
Match: KAG6605336.1 (hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31
Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 6  EEKGEDKLNGVASSSEFLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGYRWRKL 65
          ++K ED L   ASSS FLGKLE+KYKE+KENAETYPYVWGSYIVVYGG  LW GYRWRKL
Sbjct: 4  QKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRWRKL 63

Query: 66 RKTEDRVRILQEKLRQHYEAEQSSIKQSANSV 98
          RKTEDRVR LQEKLRQ YEAEQS+ KQSANSV
Sbjct: 64 RKTEDRVRALQEKLRQRYEAEQSA-KQSANSV 94

[Close]

BLAST of PI0008454 vs. TAIR 10
Match: AT5G09270.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-23
Identity = 53/88 (60.23%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 22  FLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGYRWRKLRKTEDRVRILQEKLRQ 81
           F+G +E++YK+++++AE YPYVWGSY VVYGG+FLW  YRWRKLR+TEDRVR LQ KLR+
Sbjct: 22  FVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAYRWRKLRRTEDRVRGLQTKLRK 81

Query: 82  HYEAEQSSI--KQSANSVDKNST-PSKQ 107
             E EQ+++   +SA SVDK+S+ P K+
Sbjct: 82  LVENEQAAVTASKSAQSVDKSSSIPDKK 109

[Close]

BLAST of PI0008454 vs. TAIR 10
Match: AT5G09270.2 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-23
Identity = 53/88 (60.23%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 22  FLGKLEQKYKEIKENAETYPYVWGSYIVVYGGIFLWAGYRWRKLRKTEDRVRILQEKLRQ 81
           F+G +E++YK+++++AE YPYVWGSY VVYGG+FLW  YRWRKLR+TEDRVR LQ KLR+
Sbjct: 22  FVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAYRWRKLRRTEDRVRGLQTKLRK 81

Query: 82  HYEAEQSSI--KQSANSVDKNST-PSKQ 107
             E EQ+++   +SA SVDK+S+ P K+
Sbjct: 82  LVENEQAAVTASKSAQSVDKSSSIPDKK 109

The following BLAST results are available for this feature:

BLAST of PI0008454 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008454 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCY7	3.2e-45	89.62	uncharacterized protein LOC103499620 OS=Cucumis melo OX=3656 GN=LOC103499620 PE=...	[more]
A0A5D3BSB4	3.2e-45	89.62	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1L783	3.1e-32	81.52	uncharacterized protein LOC111499806 OS=Cucurbita maxima OX=3661 GN=LOC111499806...	[more]
A0A6J1G8F0	9.1e-32	81.52	uncharacterized protein LOC111451821 OS=Cucurbita moschata OX=3662 GN=LOC1114518...	[more]
A0A6J1D6P5	1.6e-28	71.00	uncharacterized protein LOC111017444 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of PI0008454 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147347.1	5.1e-45	90.57	uncharacterized protein LOC101213780 [Cucumis sativus] >KAE8651990.1 hypothetica...	[more]
XP_008460875.1	6.6e-45	89.62	PREDICTED: uncharacterized protein LOC103499620 [Cucumis melo] >XP_008460876.1 P...	[more]
XP_038900834.1	1.9e-39	83.02	uncharacterized protein LOC120087898 [Benincasa hispida]	[more]
XP_023007268.1	6.5e-32	81.52	uncharacterized protein LOC111499806 [Cucurbita maxima]	[more]
KAG6605336.1	1.9e-31	81.52	hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of PI0008454 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09270.1	1.2e-23	60.23	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT5G09270.2	1.2e-23	60.23	unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..106
None	No IPR available	PANTHER	PTHR36794	TRANSMEMBRANE PROTEIN	coord: 6..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008454.1	PI0008454.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane