PI0008416 (gene) Melon (PI 482460) v1

Overview
NamePI0008416
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionCoiled-coil domain-containing protein 18, putative isoform 1
Locationchr11: 30509755 .. 30510662 (-)
RNA-Seq ExpressionPI0008416
SyntenyPI0008416
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCTTCCAAAAGTAAAAACAGTTGGAAGCCATTTTCTATCCTTCGTTTCTAGAGCTGTGTGTTTGGGACGACTTGTCGTTAAAGAAGATTGAAGAAAAGCTAAGAAGGAATACTAATAGTAATATAATGGGAAGTATTGATAGAAAATCATCCATTGAAAATGAGCCAAGAACTCTCAAAATGCATCAAATCCAATTTGCAAGAGTAAGTCTATTTTTCTTTTAATTATTTTTCACTATTTTATATTTTTTTTCTTTAATTTTTAGACTTAGTGATTGAATTTGGTGTTATATATAGCTCATCATTTATTTTTTCTTAATTATGATCAATTTGGATTAATATATATTTCAGGAAGCAGCACTTTATGTGATAAACACAACAACAATAGAAGAAGCAATGAAGATTTTCACAGAGGTAATTAATATTGATTAGATACAAACATACAAATTCTCTTTTCGGTAATTACCAACTTAATTACCCTATATATATATATATATATATTATTATTATTATTATTATTATATTTGAGGTGTGAATAAATGGTGGAAAATAATGGTGCAGGGATTACAACCAGTGGAATGTAAAGAAATTATTGAAGATAAAGATTCAATAATGAAAAATTGGTACCATGATGAAGAAATTGATGAGTTACAACCTTTGTATCAACTTAGAGACATTGTCTCTGCCCCATTTTAGTTTTTTTCTTTTTTCTCTCTTTTTTTTCTTTTGATAAATACACACATGTAAAGGTTTCTGTCTTAATTTTTTTAATGGAAAGGAGCAAGTTTTAATTTCCATCCATTTTTTTTAAAAAAAAACAATGGTTTTATCAGTTGTTATAGACAAATATATACAAATAAACAACTATTTATAATGTTTTAATAGTAAATGTAAATAAGGAGCTTC

mRNA sequence

TTCTCTTCCAAAAGTAAAAACAGTTGGAAGCCATTTTCTATCCTTCGTTTCTAGAGCTGTGTGTTTGGGACGACTTGTCGTTAAAGAAGATTGAAGAAAAGCTAAGAAGGAATACTAATAGTAATATAATGGGAAGTATTGATAGAAAATCATCCATTGAAAATGAGCCAAGAACTCTCAAAATGCATCAAATCCAATTTGCAAGAGAAGCAGCACTTTATGTGATAAACACAACAACAATAGAAGAAGCAATGAAGATTTTCACAGAGGGATTACAACCAGTGGAATGTAAAGAAATTATTGAAGATAAAGATTCAATAATGAAAAATTGGTACCATGATGAAGAAATTGATGAGTTACAACCTTTGTATCAACTTAGAGACATTGTCTCTGCCCCATTTTAGTTTTTTTCTTTTTTCTCTCTTTTTTTTCTTTTGATAAATACACACATGTAAAGGTTTCTGTCTTAATTTTTTTAATGGAAAGGAGCAAGTTTTAATTTCCATCCATTTTTTTTAAAAAAAAACAATGGTTTTATCAGTTGTTATAGACAAATATATACAAATAAACAACTATTTATAATGTTTTAATAGTAAATGTAAATAAGGAGCTTC

Coding sequence (CDS)

ATGGGAAGTATTGATAGAAAATCATCCATTGAAAATGAGCCAAGAACTCTCAAAATGCATCAAATCCAATTTGCAAGAGAAGCAGCACTTTATGTGATAAACACAACAACAATAGAAGAAGCAATGAAGATTTTCACAGAGGGATTACAACCAGTGGAATGTAAAGAAATTATTGAAGATAAAGATTCAATAATGAAAAATTGGTACCATGATGAAGAAATTGATGAGTTACAACCTTTGTATCAACTTAGAGACATTGTCTCTGCCCCATTTTAG

Protein sequence

MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEIIEDKDSIMKNWYHDEEIDELQPLYQLRDIVSAPF
Homology
BLAST of PI0008416 vs. ExPASy TrEMBL
Match: A0A0A0LQ89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302230 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.9e-39
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEIIED 60
          MGSIDRKSSIENEPRTLKMHQIQFAREAALYV+NT TIEEAMKIFTEGLQPVECK I+ED
Sbjct: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVMNTATIEEAMKIFTEGLQPVECKAIMED 60

Query: 61 KDSIMKNWYHDEEIDE-LQPLYQLRDIVSAPF 92
          KDSI+KNWYHDEEIDE LQP YQLRDIVSAPF
Sbjct: 61 KDSIVKNWYHDEEIDESLQPFYQLRDIVSAPF 92

BLAST of PI0008416 vs. ExPASy TrEMBL
Match: A0A1S3CDH2 (uncharacterized protein LOC103499638 OS=Cucumis melo OX=3656 GN=LOC103499638 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.5e-38
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEII-E 60
          MGSIDRKSSIENEPRTLKM+QIQFAREAALYV+NTTTIEEAMKIFTEGL+PVECK II E
Sbjct: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60

Query: 61 DKDSIMKNWYHDEEIDELQPLYQLRDIVSAPF 92
          DKDSIMKNWYHDEEIDELQP  QLRDIVSAPF
Sbjct: 61 DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF 92

BLAST of PI0008416 vs. ExPASy TrEMBL
Match: A0A6J1G887 (uncharacterized protein LOC111451648 OS=Cucurbita moschata OX=3662 GN=LOC111451648 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.1e-29
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEIIED 60
          M  IDRKSSIENEPRTLKMHQIQFAREAALYVINT++IEEAM+IFTEGL+ VECK  IED
Sbjct: 1  MERIDRKSSIENEPRTLKMHQIQFAREAALYVINTSSIEEAMRIFTEGLEAVECKP-IED 60

Query: 61 KDSIMKNWYHDEEIDELQPLYQLRDIVSAPF 92
          +DS M+N  H+EE+DEL   Y+L DIVSAPF
Sbjct: 61 RDSSMQNCCHEEEVDELPSFYRLPDIVSAPF 90

BLAST of PI0008416 vs. ExPASy TrEMBL
Match: A0A6J1DBC1 (uncharacterized protein LOC111018915 OS=Momordica charantia OX=3673 GN=LOC111018915 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.3e-26
Identity = 64/92 (69.57%), Postives = 78/92 (84.78%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEIIE- 60
          MG IDRKSSIENEPRTLKMHQIQFAREAALY++NTTTI+EAM+IFTEGL+ VECK   + 
Sbjct: 6  MGRIDRKSSIENEPRTLKMHQIQFAREAALYILNTTTIDEAMRIFTEGLETVECKATRDR 65

Query: 61 DKDSIMKNWYHDEEIDELQPLYQLRDIVSAPF 92
          + +   K  Y++EE+ +L+PLY+ RDIVSAPF
Sbjct: 66 NINGRKKQVYYEEELSDLEPLYRFRDIVSAPF 97

BLAST of PI0008416 vs. ExPASy TrEMBL
Match: A0A1R3GDT9 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35729 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.5e-16
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 0

Query: 3   SIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEIIEDKD 62
           +IDRKSSIE+EPRTL  HQIQ AREAA+YV++T +IEEAM IFTEGL+PV         D
Sbjct: 12  NIDRKSSIESEPRTLSFHQIQCAREAAMYVVSTRSIEEAMSIFTEGLEPVVSG---ARAD 71

Query: 63  SIMKNWYHDE------EIDELQPLYQLRDIVSAPF 92
           +I  N   D       E++E Q L++ RD+VSAPF
Sbjct: 72  NIGTNTMMDSKEMQFLELEEFQQLHEFRDVVSAPF 103

BLAST of PI0008416 vs. NCBI nr
Match: XP_011649401.1 (uncharacterized protein LOC105434623 [Cucumis sativus] >KGN62156.1 hypothetical protein Csa_006615 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 8.0e-39
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEIIED 60
          MGSIDRKSSIENEPRTLKMHQIQFAREAALYV+NT TIEEAMKIFTEGLQPVECK I+ED
Sbjct: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVMNTATIEEAMKIFTEGLQPVECKAIMED 60

Query: 61 KDSIMKNWYHDEEIDE-LQPLYQLRDIVSAPF 92
          KDSI+KNWYHDEEIDE LQP YQLRDIVSAPF
Sbjct: 61 KDSIVKNWYHDEEIDESLQPFYQLRDIVSAPF 92

BLAST of PI0008416 vs. NCBI nr
Match: XP_008460897.1 (PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo])

HSP 1 Score: 167.5 bits (423), Expect = 5.2e-38
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEII-E 60
          MGSIDRKSSIENEPRTLKM+QIQFAREAALYV+NTTTIEEAMKIFTEGL+PVECK II E
Sbjct: 1  MGSIDRKSSIENEPRTLKMNQIQFAREAALYVLNTTTIEEAMKIFTEGLKPVECKAIIDE 60

Query: 61 DKDSIMKNWYHDEEIDELQPLYQLRDIVSAPF 92
          DKDSIMKNWYHDEEIDELQP  QLRDIVSAPF
Sbjct: 61 DKDSIMKNWYHDEEIDELQPFCQLRDIVSAPF 92

BLAST of PI0008416 vs. NCBI nr
Match: XP_038902606.1 (uncharacterized protein LOC120089256 [Benincasa hispida])

HSP 1 Score: 156.8 bits (395), Expect = 9.1e-35
Identity = 80/91 (87.91%), Postives = 85/91 (93.41%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEIIED 60
          MG+IDRKSSIENEPRTL+MHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECK  I+D
Sbjct: 1  MGNIDRKSSIENEPRTLRMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECK-AIQD 60

Query: 61 KDSIMKNWYHDEEIDELQPLYQLRDIVSAPF 92
          KDSIM N+YH+EE DELQ LYQ RDIVSAPF
Sbjct: 61 KDSIMGNYYHEEEDDELQSLYQPRDIVSAPF 90

BLAST of PI0008416 vs. NCBI nr
Match: XP_023512402.1 (uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo] >KAG7011119.1 hypothetical protein SDJN02_27917, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.1 bits (362), Expect = 6.1e-31
Identity = 68/91 (74.73%), Postives = 83/91 (91.21%), Query Frame = 0

Query: 1  MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEIIED 60
          MG +DRKSSIE EPRTLKM+QIQFAREAALYV+NTT++EEA+KIFTEGL+ VECK I ++
Sbjct: 1  MGRMDRKSSIETEPRTLKMNQIQFAREAALYVMNTTSMEEAIKIFTEGLEAVECKAIRDE 60

Query: 61 KDSIMKNWYHDEEIDELQPLYQLRDIVSAPF 92
           +SIM+NW+H++E DEL PLYQLRDIV+APF
Sbjct: 61 DESIMENWFHEQEADELPPLYQLRDIVTAPF 91

BLAST of PI0008416 vs. NCBI nr
Match: KAG6571348.1 (hypothetical protein SDJN03_30263, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 142.5 bits (358), Expect = 1.8e-30
Identity = 67/91 (73.63%), Postives = 82/91 (90.11%), Query Frame = 0

Query: 1   MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFTEGLQPVECKEIIED 60
           MG +DRKSSIE EPRTLKM+QIQFAREAALYV+NTT++EEA+KIFTEGL+  ECK I ++
Sbjct: 11  MGRMDRKSSIEREPRTLKMNQIQFAREAALYVMNTTSMEEAIKIFTEGLEAAECKAIRDE 70

Query: 61  KDSIMKNWYHDEEIDELQPLYQLRDIVSAPF 92
            +SIM+NW+H++E DEL PLYQLRDIV+APF
Sbjct: 71  DESIMENWFHEQEADELPPLYQLRDIVTAPF 101

BLAST of PI0008416 vs. TAIR 10
Match: AT4G33467.2 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 2.9e-10
Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 0

Query: 1   MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFT----EGLQPVECK- 60
           M  ++R+SSIE EP TL + Q++ ARE ALYV+ T T+EEAM IFT    EGL+  E + 
Sbjct: 7   MDMLERRSSIETEPMTLHLDQLENAREEALYVMKTKTMEEAMDIFTKETHEGLRASEERG 66

Query: 61  -EIIEDKDSIMKNWYHDEEIDELQPLYQLRDIVSAPF 92
              I  KD    + Y DE +  + P     DI +APF
Sbjct: 67  GRCINLKDEEDDDDYEDERMMFMSP--HAWDIHTAPF 101

BLAST of PI0008416 vs. TAIR 10
Match: AT4G33467.1 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-10
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 0

Query: 1   MGSIDRKSSIENEPRTLKMHQIQFAREAALYVINTTTIEEAMKIFT-----EGLQPVECK 60
           M  ++R+SSIE EP TL + Q++ ARE ALYV+ T T+EEAM IFT     EGL+  E +
Sbjct: 7   MDMLERRSSIETEPMTLHLDQLENAREEALYVMKTKTMEEAMDIFTKQETHEGLRASEER 66

Query: 61  --EIIEDKDSIMKNWYHDEEIDELQPLYQLRDIVSAPF 92
               I  KD    + Y DE +  + P     DI +APF
Sbjct: 67  GGRCINLKDEEDDDDYEDERMMFMSP--HAWDIHTAPF 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LQ893.9e-3992.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302230 PE=4 SV=1[more]
A0A1S3CDH22.5e-3892.39uncharacterized protein LOC103499638 OS=Cucumis melo OX=3656 GN=LOC103499638 PE=... [more]
A0A6J1G8878.1e-2976.92uncharacterized protein LOC111451648 OS=Cucurbita moschata OX=3662 GN=LOC1114516... [more]
A0A6J1DBC11.3e-2669.57uncharacterized protein LOC111018915 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A1R3GDT93.5e-1655.79Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_35729 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_011649401.18.0e-3992.39uncharacterized protein LOC105434623 [Cucumis sativus] >KGN62156.1 hypothetical ... [more]
XP_008460897.15.2e-3892.39PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo][more]
XP_038902606.19.1e-3587.91uncharacterized protein LOC120089256 [Benincasa hispida][more]
XP_023512402.16.1e-3174.73uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo] >KAG7011119.1 ... [more]
KAG6571348.11.8e-3073.63hypothetical protein SDJN03_30263, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT4G33467.22.9e-1044.33unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bact... [more]
AT4G33467.13.7e-1043.88unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34808EXPRESSED PROTEINcoord: 3..91
NoneNo IPR availablePANTHERPTHR34808:SF2EXPRESSED PROTEINcoord: 3..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0008416.1PI0008416.1mRNA