PI0008374 (gene) Melon (PI 482460) v1

Overview


Name	PI0008374
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr09: 1968244 .. 1968474 (+)
RNA-Seq Expression	PI0008374
Synteny	PI0008374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGTCTTGTAGCAGTAATACGACGCCGTTTCCACAAATACCGAGACCCTCTACACCCCAGTACGACGTCGTACCCAGCACAATCCGAGCCCAAAACTGCGAAGAGTAACATGGAGTTGGGGCAGAGCGAGGGAAAGCAACCTTACAATTGCTTGAGTGTAAAGCTTTCTTCCTGCAAATTGGCAGTCCATTTCGTCATTAATCAATCCAAAATCCAATACCCATAA

mRNA sequence

ATGGCGGGTCTTGTAGCAGTAATACGACGCCGTTTCCACAAATACCGAGACCCTCTACACCCCAGTACGACGTCGTACCCAGCACAATCCGAGCCCAAAACTGCGAAGAGTAACATGGAGTTGGGGCAGAGCGAGGGAAAGCAACCTTACAATTGCTTGAGTGTAAAGCTTTCTTCCTGCAAATTGGCAGTCCATTTCGTCATTAATCAATCCAAAATCCAATACCCATAA

Coding sequence (CDS)

ATGGCGGGTCTTGTAGCAGTAATACGACGCCGTTTCCACAAATACCGAGACCCTCTACACCCCAGTACGACGTCGTACCCAGCACAATCCGAGCCCAAAACTGCGAAGAGTAACATGGAGTTGGGGCAGAGCGAGGGAAAGCAACCTTACAATTGCTTGAGTGTAAAGCTTTCTTCCTGCAAATTGGCAGTCCATTTCGTCATTAATCAATCCAAAATCCAATACCCATAA

Protein sequence

MAGLVAVIRRRFHKYRDPLHPSTTSYPAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSCKLAVHFVINQSKIQYP

Homology

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BLAST of PI0008374 vs. ExPASy TrEMBL
Match: A0A0A0KK84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G153050 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.4e-34
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MAGLVAVIRRRFHKYRDPLHPSTTSYPAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC 60
          MAGLVAVIRRRFHKYRDPLHPSTTSY AQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC
Sbjct: 1  MAGLVAVIRRRFHKYRDPLHPSTTSYSAQSEPKTAKSNMELGQSEGKQPYNCLSVKLSSC 60

Query: 61 KLAVHFVINQSKIQYP 77
          KLAVHFVINQSKIQYP
Sbjct: 61 KLAVHFVINQSKIQYP 76

The following BLAST results are available for this feature:

BLAST of PI0008374 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK84	2.4e-34	98.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G153050 PE=4 SV=1	[more]

BLAST of PI0008374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

BLAST of PI0008374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008374.1	PI0008374.1	mRNA