PI0008366 (gene) Melon (PI 482460) v1

Overview


Name	PI0008366
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	agamous-like MADS-box protein AGL62
Location	chr06: 9789443 .. 9793995 (+)
RNA-Seq Expression	PI0008366
Synteny	PI0008366

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAATTACAGACCATTCCCATGAACAAAACTCTCCGCCGTCAAAATATACAAATCAAAAAGTTGGAGAAAAGAGCAGTAAGCAAGTCACGTTATCGAAGCGCCATGCAGGACTTTTCAAGAAAGTCGGCGAGCTCTCTGTTCTTTATGGGCAGAGGTAGCCATTATAGTCTTCTCTCCTAATGATAAGGTTTTTTGTTTCGGTCATCACGATGTTGATGTGCTTTTAGATCGTTATCTCACAAAAAATTTGTCGCCGCCGAAGCCAGCGGAGAGTTACATTCCTGTACGGGAGTTTAATCATGATTTTGCTAATTTTGCATTGGAGTTTGAGGCATAGAAGAAACGAGCGGTGGAAATGATTCGCGCGATGGAGGATTCGAGAAAGAACGGCGGATTTTGGTTGCAGGAGGCGGTGTGGACGGGATGCGATTGGAGGAATTGAAGGAGTTCCAATCGGCATTGATGGATTTAAGAGCCAAAGTGGCGGAGAGAATTGAGAAATGGACGGAAAATTTTATAAAGTAACCTAAAAAGTAAACTTTTCTGTCATTGACCCGTTTTTAAAAACTTTATTACGAGTAACCTTTTCGCCATGTGAATTTACATTCTTACCCTTATCTATTCAACGAACTTTATGTTTCATTTCTCTTTCTCCAACCAATTTCTTAAATGCATCTTTCACCAACATTCCACCGGAACATTTATTCTCAACCAACATTTATCCATAAGCATCGAATCATCTTGTATCAACAATGGAACAAAAAAAGTCCCTCTCAGACATTACTTCTCATTCTATACTCTTCACTAAAAAATTCTTCTCCAATGGAACTCTATCAAAATATTTATAGGTGAAAGTTCGATTTCTCTATCTCTTTCATAATATTTGCTCGGATCCATCTTTAGGAAAAAACAATTAGACTATAAGTGCAAGCAGTTGTTTTTTTTTTTTTTTTTACATGACAATCATACATGATCGTGTATTAAAGCCCAAACGATCGATTAATTATTTATACAAGATCGTGTAACGAAGATTGAACGATCGTTTGGATATTCATACACGATCTGTAACAACGACTATTAGTTGGTTAGTTTATCTTGTGTACTTGGCAAGAAACAGTGCCCAAAAAATATTTGTCCGCAGATACAACCATTCTAACAAACTGATCATAGGAAAAAAATGAACTGATCATAGGAAAAAAAATGCAAACTTCAGTTATCTACTACAAACGATCGTGTAGAAATACCAAAAGATCTTATAGAGAAACCAAACAATTGTTCTGAAAAACTAAACGATCGTGCAGAAAATCTAAATGATATTTTGACCTGGATTGAACGACCATTAATTATTGGTAAGCGATCGTTCAGTAAGTGACAATCATTTAGTAAATATTGAGAGATCGTTTATTCTGGGTTAAAAGATCGTTTAATATGAGGACATTTCTTTCAGATCGTTTAACATAAGGACATTTCTTTTAGATGAACAGTTCAAGTACATGAAAGCAATGGTCGATGAAAATACCTTCGAAGTTCAAAGGGAATACGAACAGTACAAAAGAATGATAAGCGTTGAGAGAAACGTAAACGAAAAGAGAAAGCAAATGAGAAGAAAAGTAAGCAAATGAGGTAAGAGACGATTGAGATTTAACCTTATTTAAATCACAGGAGTAAAAGGGATATTTCACATGTTATTTAGTCGTTCAGTGTATTTTAATAAACGAAAATTCTACACGATTAGTGAATTATTTACTATGCGATCGCATACTTGATACCACACGATCTTTAGTTAATACTAAGTGATCGTTTAAAAATACTTCATGATCGTGCACTTGAGACTAAGCGATGGTTTGGTAAATATTAGCCAATCGTTTAGTAAACTAAATGATTATGTGTTAATAAGTGGTTGATAACAAATTTTGAATAACTTGTAAAAATCTAAAGATAGACAAAATTTTGGTGCATTGAAGAAATTGGTTGAAAAGAGAGAAAGGAAACGTAAAGTTCAATTGTATAGAGTTGAATAAATAAGGGTAAGAATGTAAATTCACATGGCAAAAATGTTAGTTGTAATAAAGTAAAGAAATGGGCCAGTGATAGAAAAGTTTTGGGGAATTGGATGAAATGACAAATTCATGGTGGTCTCTTGAATTTTTGGCAAAAAATGTGGTTGATAAGTTTTATTGCAAATCACATGCCAGTTATTTTCAATATGTCAGATTTGACCTTCATGTAGTTTGATATATAACTTTTCGCATATTATGTATTTTTTTCATATACAGTGTAAATGAAATTATCATAAACGTGATTTGATTTAACCTAACAAACATTTAGATTGATATAGGAAAATATTTGGTTTGTTTTATTTTATTTTGATAATCTTCAAATATTTTTATTTATTAACAAAAAAAAAAAAGTTATTTACATTTGATTTAATTCAAAATATTTCATTGACCAACTTGAAATTTTTTTTATTTTATTTTACCAAAACAATTTTTCATATAACTGAAAAAACTATATTGGAAATTTTTTTTGTTTCATGTGTTTTATTATTTAATTGTTTTTCAAAATTATCAAAATATTTCATTAATCAACCTTAAAAAATAGTAAATATTTGGTTGTTTTTTTGTTTTTTTAAAATCGTTTATTAGATTCACTTTAATTTATCTAAAAGATCAAAATAATTTTGATAATTTTGGAAAACAATTAAAGTTGATCTGCCACGTTTTATCAATATGCCTGATTTGACCTTGATATGGTCGGATGTTTGACTTTTCGATTACTTTGTAATTTGTTCGATTATAGTGTAAATAAAATCATTTGAAACTAAATCATGAATCAATTGTATGTAGAACTATTTTCTAATAGGAAGTATGAGATATGTGTTTCAAACCTAACGAATTTGAGAGAAATGTGTCGTAATTTGCTCGATTGAATTTTGAATTGTTTATTTTATACTAGATCTGATTTAACCAACTATTCACTACCTAACTTATTTGATTTGTTTTATTATTATTTTTTTAACCTATGAAAATATCTCATTAACCAACTTTTACAAATATATATATAGATAGATCTCGTTTTTTATTTTTTGATTTACCAAAAGATTTAATTTGTTTAATTTTTTTCAAAGATGTCAAAATATCTCATTAACCAACTTAAAAAAAAAAATAGTAAAATTTGGTTTGTTTGATTAGTTTGTTTTAAAAATATCAAAATAACTAAAGAATATATAATTCATGTATCATGTTGTCCGATTCAAAGTAATTTATATATAATGTATAAATACTATGTAATTCAAAATACTGTAATTTGTTGCAATTACAGTAATATCTGATTTTTTTTAAATAATTTTTTTTCCAACAAAGTTGTTGAGATTTGAAATATATTTTCAAATAAAGTATTTTGATATATTATAGATTTTTCAACTCTCAACAAACTGATGAAACTCACTCTTCCATATCTCTTTTATATCTCTTCCATATCTCTTCAATGTCACTAATGACTTACATAACACGATTTCTATTTTTTTTTTCATTTACATCATTTTTATAATACTTGTGTATATTATTTTTTTATAACATTACAAAATATTTTTTAGATGATATATTGGTATATTATAATTTTTTAAAAAATACCTATGTTTTTTTAACCATTTACTAATTTAAAAAAAAAAGAAAAAAAAATAAACCCTAGATTTTAAACTAGCCACGTTGAAACCCCTTTGCTTGAAATTTGTCATTGTTTACTTTGAGAAATTTGATGATTCTATCATTCATTTTCTTGTTCATCATTCATGGCCTTCATGGTCTTCTCTTCATAAAGGATTTCTTCCTCCACTGCGAAAATCTCGAATGAATGGACAATGGAAAGCTACACGACTTCATGAATTTCGATCAAATGATTTTTTCCTCAACCGCAAGGATTTCTAATAAACAAATAGTGGAAAGCTTCATGCACGATAGTTTTTTTGGGTGGAATAGGTTGAAGGTGGAGAAAAGTTGAAGAGGAAACAAAAGATAGAGAATTTCTTGGTTCACGCATGAAGAAGGAGAATGAGAGAATTTTGTAGAATAAGTTGAAGGTGAAGAGAAGTTGAAGAGGAAAAAGAAGATAGAAAGTTTCTTCTTGGTTCACGGAAGAAGCGAGGGAAAGGAGAAAGATAATTTTGAGTTGTATATTGGATACATTACTTACCTTATTAGAGTGCGAGTTTTTAATTTTTGTGAAACTTTATTTGAATATTAAGTTTAAATGAGGTTATTTTTGTCAATTTATATTATTCGTTTTTAATTAATTTTTTTTTTGTTTGTTTTTTTTCTTTGCTATTTACCCAAATTACAAAATTTATTTTGCTATTTATGTAGTTGTGCCAAAAGTTTTTGGAGTTTACTTTATGAAATTTTCCGAAATTGGCGACAGTAAGAATTGGAGTGTTGCCAGCGCTACGACCGCCGCCGCAGCCGATGACGTCGTCGTGGTTTCACCTTTCTGGAAACCACCAACAATTGGCTCCTCCGACCGCGTTTCATCTCGCCAAAAACTACGGTTAG

mRNA sequence

ATGGAGAAATTACAGACCATTCCCATGAACAAAACTCTCCGCCGTCAAAATATACAAATCAAAAAGTTGGAGAAAAGAGCAGTAAGCAAGTCACAAAGTCGGCGAGCTCTCTGTTCTTTATGGGCAGAGGTAGCCATTATAGTCTTCTCTCCTAATGATAAGGTTTTTTGTTTCGGTCATCACGATGTTGATGTGCTTTTAGATCGTTATCTCACAAAAAATTTGTCGCCGCCGAAGCCAGCGGAGAGTTACATTCCTAAGAAACGAGCGGTGGAAATGATTCGCGCGATGGAGGATTCGAGAAAGAACGGCGGATTTTGGTTGCAGGAGGCGGAGTTCCAATCGGCATTGATGGATTTAAGAGCCAAAGTGGCGGAGAGAATTGAGAAATGGACGGAAAATTTTATAAAAATTGGAGTGTTGCCAGCGCTACGACCGCCGCCGCAGCCGATGACGTCGTCGTGGTTTCACCTTTCTGGAAACCACCAACAATTGGCTCCTCCGACCGCGTTTCATCTCGCCAAAAACTACGGTTAG

Coding sequence (CDS)

ATGGAGAAATTACAGACCATTCCCATGAACAAAACTCTCCGCCGTCAAAATATACAAATCAAAAAGTTGGAGAAAAGAGCAGTAAGCAAGTCACAAAGTCGGCGAGCTCTCTGTTCTTTATGGGCAGAGGTAGCCATTATAGTCTTCTCTCCTAATGATAAGGTTTTTTGTTTCGGTCATCACGATGTTGATGTGCTTTTAGATCGTTATCTCACAAAAAATTTGTCGCCGCCGAAGCCAGCGGAGAGTTACATTCCTAAGAAACGAGCGGTGGAAATGATTCGCGCGATGGAGGATTCGAGAAAGAACGGCGGATTTTGGTTGCAGGAGGCGGAGTTCCAATCGGCATTGATGGATTTAAGAGCCAAAGTGGCGGAGAGAATTGAGAAATGGACGGAAAATTTTATAAAAATTGGAGTGTTGCCAGCGCTACGACCGCCGCCGCAGCCGATGACGTCGTCGTGGTTTCACCTTTCTGGAAACCACCAACAATTGGCTCCTCCGACCGCGTTTCATCTCGCCAAAAACTACGGTTAG

Protein sequence

MEKLQTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSLWAEVAIIVFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIPKKRAVEMIRAMEDSRKNGGFWLQEAEFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQPMTSSWFHLSGNHQQLAPPTAFHLAKNYG

Homology

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BLAST of PI0008366 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 9.6e-07
Identity = 33/75 (44.00%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 5  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDV 64
          Q I M K     N+Q+    KR     +    LC+L  AEVAI+VFSP  KVF FGH +V
Sbjct: 9  QKIEMVKMKNESNLQV-TFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNV 68

Query: 65 DVLLDRYLTKNLSPP 79
          D ++DR++  N  PP
Sbjct: 69 DSVIDRFINNNPLPP 82

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BLAST of PI0008366 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.0e-05
Identity = 36/109 (33.03%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 5   QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDV 64
           Q IPM K  +  + Q+    KR     +    LC+L  AE+ IIVFSP  K F FGH  V
Sbjct: 65  QKIPMVKIKKESHRQV-TFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSV 124

Query: 65  DVLLDRYLTKN--------LSPPKPAESYIPKKRAVEMIRAMEDSRKNG 105
           + +LDRY+++N             PA S     +   ++  +E+ +K G
Sbjct: 125 ESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKG 172

[Close]

BLAST of PI0008366 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.4e-04
Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 9  MNKTLRRQNIQIKKLEKRA---VSKSQSRRAL-------CSLW-AEVAIIVFSPNDKVFC 68
          + KTL R+ ++I K+ K +   V+ S+ +  L       C+L  A++A+IVFSP  KVF 
Sbjct: 2  VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 69 FGHHDVDVLLDRY 71
          FGH +VDVLLD +
Sbjct: 62 FGHPNVDVLLDHF 74

[Close]

BLAST of PI0008366 vs. ExPASy TrEMBL
Match: A0A0A0LE01 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.0e-57
Identity = 135/215 (62.79%), Postives = 147/215 (68.37%), Query Frame = 0


Query: 1   MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVF 60
           MEKL TIPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVF
Sbjct: 1   MEKLNTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP------------------KKRAV 120
           SPNDK+FCFGH DVDVLLDRYLT NLSPPKPAESYIP                  KKRA 
Sbjct: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAA 120

Query: 121 EMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVL 177
           E+IRA EDSRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +L
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

[Close]

BLAST of PI0008366 vs. ExPASy TrEMBL
Match: A0A1S3CRI8 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.7e-54
Identity = 134/223 (60.09%), Postives = 147/223 (65.92%), Query Frame = 0


Query: 1   MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVF 60
           MEKL TIPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVF
Sbjct: 1   MEKLHTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP------------------KKRAV 120
           SPNDKVFCFGH DVDVLLDRYLT NLSPPKPAESYIP                  KKRA 
Sbjct: 61  SPNDKVFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120

Query: 121 EMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVL 178
           E+IRA EDSRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +L
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

[Close]

BLAST of PI0008366 vs. ExPASy TrEMBL
Match: A0A5D3D807 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001020 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.5e-50
Identity = 127/215 (59.07%), Postives = 140/215 (65.12%), Query Frame = 0


Query: 9   MNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFC 68
           M KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDKVFC
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 69  FGHHDVDVLLDRYLTKNLSPPKPAESYIP------------------KKRAVEMIRAMED 128
           FGH DVDVLLDRYLT NLSPPKPAESYIP                  KKRA E+IRA ED
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 120

Query: 129 SRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQ 178
           SRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +LPAL PPPQ
Sbjct: 121 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 180

[Close]

BLAST of PI0008366 vs. ExPASy TrEMBL
Match: A0A6J1H4M6 (agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC111460353 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.9e-42
Identity = 111/199 (55.78%), Postives = 130/199 (65.33%), Query Frame = 0


Query: 5   QTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPND 64
           ++IPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPND
Sbjct: 9   KSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPND 68

Query: 65  KVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP------------------KKRAVEMIR 124
           KVFCFGH DVDVLLDRYLT NLSPPKPAESY+P                  KKRA E+I+
Sbjct: 69  KVFCFGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQ 128

Query: 125 AMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALR 163
           A E+SR +GGFW +EA          EF+S+LMDLRAKVAE++EK T   I   +LPAL 
Sbjct: 129 ASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALP 188

[Close]

BLAST of PI0008366 vs. ExPASy TrEMBL
Match: A0A6J1KVC9 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.6e-42
Identity = 108/197 (54.82%), Postives = 128/197 (64.97%), Query Frame = 0


Query: 5   QTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPND 64
           ++IPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPND
Sbjct: 9   KSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPND 68

Query: 65  KVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP------------------KKRAVEMIR 124
           KVFCFGH +VDVLLDRYLT NLSPPKPAESY+P                  KKRA E+I+
Sbjct: 69  KVFCFGHPNVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQ 128

Query: 125 AMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALR 163
           A E+SR +GGFW +EA          EF+S+LMDLRAKVAE++EK T   I   +LPAL 
Sbjct: 129 ASEESRNSGGFWWEEAVEGMRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALP 188

[Close]

BLAST of PI0008366 vs. NCBI nr
Match: XP_004147877.3 (agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN59988.1 hypothetical protein Csa_002516 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 1.7e-56
Identity = 135/215 (62.79%), Postives = 147/215 (68.37%), Query Frame = 0


Query: 1   MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVF 60
           MEKL TIPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVF
Sbjct: 1   MEKLNTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP------------------KKRAV 120
           SPNDK+FCFGH DVDVLLDRYLT NLSPPKPAESYIP                  KKRA 
Sbjct: 61  SPNDKLFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAA 120

Query: 121 EMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVL 177
           E+IRA EDSRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +L
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

[Close]

BLAST of PI0008366 vs. NCBI nr
Match: XP_008466532.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 7.7e-54
Identity = 134/223 (60.09%), Postives = 147/223 (65.92%), Query Frame = 0


Query: 1   MEKLQTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVF 60
           MEKL TIPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVF
Sbjct: 1   MEKLHTIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVF 60

Query: 61  SPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP------------------KKRAV 120
           SPNDKVFCFGH DVDVLLDRYLT NLSPPKPAESYIP                  KKRA 
Sbjct: 61  SPNDKVFCFGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAA 120

Query: 121 EMIRAMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVL 178
           E+IRA EDSRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +L
Sbjct: 121 ELIRAAEDSRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLL 180

[Close]

BLAST of PI0008366 vs. NCBI nr
Match: KAA0041553.1 (agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK19701.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 208.4 bits (529), Expect = 5.2e-50
Identity = 127/215 (59.07%), Postives = 140/215 (65.12%), Query Frame = 0


Query: 9   MNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPNDKVFC 68
           M KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPNDKVFC
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 69  FGHHDVDVLLDRYLTKNLSPPKPAESYIP------------------KKRAVEMIRAMED 128
           FGH DVDVLLDRYLT NLSPPKPAESYIP                  KKRA E+IRA ED
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 120

Query: 129 SRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPALRPPPQ 178
           SRKNGGFW QEA          +F+SALMDLRAKVAER+EK T   I   +LPAL PPPQ
Sbjct: 121 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 180

[Close]

BLAST of PI0008366 vs. NCBI nr
Match: XP_038875004.1 (agamous-like MADS-box protein AGL62 [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 6.8e-50
Identity = 126/218 (57.80%), Postives = 141/218 (64.68%), Query Frame = 0


Query: 1   MEKLQTIPMNKTLRRQNIQIKKLEKRAVSK--SQSRRA-----------LCSLWAEVAII 60
           MEKLQ+IPM KTL RQ I+IKKLEK++  +     RRA           LC +  EVAII
Sbjct: 1   MEKLQSIPMKKTLGRQKIEIKKLEKKSTKQVTFSKRRAGLFKKAGELSILCGV--EVAII 60

Query: 61  VFSPNDKVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP------------------KKR 120
           VFSPNDKVFCFGH DV+ LLDRYL KNLSPPKPAESYIP                  KKR
Sbjct: 61  VFSPNDKVFCFGHPDVEGLLDRYLNKNLSPPKPAESYIPVEEFNRDFADVALEFETEKKR 120

Query: 121 AVEMIRAMEDSRKNGGFWLQE----------AEFQSALMDLRAKVAERIEKWTENFIKIG 178
           A ++IRA EDSRKNG FW QE            F+SALMDLRA+VAER+EK T   I   
Sbjct: 121 ATDLIRAAEDSRKNGRFWWQEPVEGMRLDELKVFRSALMDLRARVAERVEKLTAARIGGL 180

[Close]

BLAST of PI0008366 vs. NCBI nr
Match: KAG7013413.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 182.2 bits (461), Expect = 4.0e-42
Identity = 111/199 (55.78%), Postives = 130/199 (65.33%), Query Frame = 0


Query: 5   QTIPMNKTLRRQNIQIKKLEKRA---VSKSQSRRALCS--------LWAEVAIIVFSPND 64
           ++IPM KTL RQ I+IKKLEK++   V+ S+ R  L            AEVAIIVFSPND
Sbjct: 9   KSIPMKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPND 68

Query: 65  KVFCFGHHDVDVLLDRYLTKNLSPPKPAESYIP------------------KKRAVEMIR 124
           KVFCFGH DVDVLLDRYLT NLSPPKPAESY+P                  KKRA E+I+
Sbjct: 69  KVFCFGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQ 128

Query: 125 AMEDSRKNGGFWLQEA----------EFQSALMDLRAKVAERIEKWTENFIKIGVLPAL- 163
           A E+SR +GGFW +EA          EF+S+LMDLRAKVAE++EK T   I   +LPAL 
Sbjct: 129 ASEESRNSGGFWWEEAVEGLRLEELKEFRSSLMDLRAKVAEKVEKLTAVRIGGPLLPALP 188

[Close]

BLAST of PI0008366 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 55.1 bits (131), Expect = 6.8e-08
Identity = 33/75 (44.00%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 5  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDV 64
          Q I M K     N+Q+    KR     +    LC+L  AEVAI+VFSP  KVF FGH +V
Sbjct: 9  QKIEMVKMKNESNLQV-TFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNV 68

Query: 65 DVLLDRYLTKNLSPP 79
          D ++DR++  N  PP
Sbjct: 69 DSVIDRFINNNPLPP 82

[Close]

BLAST of PI0008366 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 49.7 bits (117), Expect = 2.9e-06
Identity = 36/109 (33.03%), Postives = 53/109 (48.62%), Query Frame = 0


Query: 5   QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDV 64
           Q IPM K  +  + Q+    KR     +    LC+L  AE+ IIVFSP  K F FGH  V
Sbjct: 65  QKIPMVKIKKESHRQV-TFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSV 124

Query: 65  DVLLDRYLTKN--------LSPPKPAESYIPKKRAVEMIRAMEDSRKNG 105
           + +LDRY+++N             PA S     +   ++  +E+ +K G
Sbjct: 125 ESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKG 172

[Close]

BLAST of PI0008366 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 46.6 bits (109), Expect = 2.4e-05
Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 9  MNKTLRRQNIQIKKLEKRA---VSKSQSRRAL-------CSLW-AEVAIIVFSPNDKVFC 68
          + KTL R+ ++I K+ K +   V+ S+ +  L       C+L  A++A+IVFSP  KVF 
Sbjct: 2  VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 69 FGHHDVDVLLDRY 71
          FGH +VDVLLD +
Sbjct: 62 FGHPNVDVLLDHF 74

[Close]

BLAST of PI0008366 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 28/71 (39.44%), Postives = 36/71 (50.70%), Query Frame = 0


Query: 5  QTIPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSL-WAEVAIIVFSPNDKVFCFGHHDV 64
          Q I M K     N+Q+    KR     +    LC+L  AE+ +IVFSP  KVF FGH  V
Sbjct: 9  QKIEMKKMENESNLQV-TFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSFGHPSV 68

Query: 65 DVLLDRYLTKN 75
            L+ R+   N
Sbjct: 69 QELIHRFSNPN 78

[Close]

BLAST of PI0008366 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 41.6 bits (96), Expect = 7.8e-04
Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 0


Query: 7  IPMNKTLRRQNIQIKKLEKRAVSKSQSRRALCSLW-AEVAIIVFSPNDKVFCFGHHDVDV 66
          I + K     N+Q+    KR     +    LC+L  AE+AIIVFSP+ K + FGH +V+ 
Sbjct: 11 IELVKMTNESNLQV-TFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHPNVNK 70

Query: 67 LLDRYL 72
          LLD  L
Sbjct: 71 LLDHSL 75

The following BLAST results are available for this feature:

BLAST of PI0008366 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	9.6e-07	44.00	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	4.0e-05	33.03	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O80807	3.4e-04	42.47	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]

BLAST of PI0008366 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE01	8.0e-57	62.79	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE...	[more]
A0A1S3CRI8	3.7e-54	60.09	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4...	[more]
A0A5D3D807	2.5e-50	59.07	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1H4M6	1.9e-42	55.78	agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC11146035...	[more]
A0A6J1KVC9	5.6e-42	54.82	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111499040 ...	[more]

BLAST of PI0008366 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147877.3	1.7e-56	62.79	agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN59988.1 hypothetical p...	[more]
XP_008466532.1	7.7e-54	60.09	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
KAA0041553.1	5.2e-50	59.07	agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK19701.1 agamo...	[more]
XP_038875004.1	6.8e-50	57.80	agamous-like MADS-box protein AGL62 [Benincasa hispida]	[more]
KAG7013413.1	4.0e-42	55.78	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of PI0008366 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	6.8e-08	44.00	AGAMOUS-like 62	[more]
AT2G24840.1	2.9e-06	33.03	AGAMOUS-like 61	[more]
AT1G65360.1	2.4e-05	42.47	AGAMOUS-like 23	[more]
AT4G36590.1	1.2e-04	39.44	MADS-box transcription factor family protein	[more]
AT1G01530.1	7.8e-04	40.91	AGAMOUS-like 28	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..80 e-value: 5.4E-8 score: 34.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 41..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008366.1	PI0008366.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity