PI0008323 (gene) Melon (PI 482460) v1

Overview


Name	PI0008323
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	GATA zinc finger domain-containing protein 10-like isoform X2
Location	chr10: 13529820 .. 13531144 (-)
RNA-Seq Expression	PI0008323
Synteny	PI0008323

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCACAGCTTCAACATGTCAACGATCATCTACTACCTGGACGAGCATACGGTTCACGGTATGTTATTTTATTTTAATTTAGATCAACAATAGTTTTATACTGATTGGGTGATATAACTAGTTCAAAATGTAAAATAGTAGTTTATTAATACAGATGGAGAGACCAATTTTGTGTAACTAGATCAATTACTCATGTAGTTAGTCAGTATAGGTACATGTTTGACCTTTTTCAGCGTAACAGATACGTAAATACTAAAACTTGATTTCTTTATACTTTAGTATTTATTTATTTATTTATAATGTAATATGTGATGTTTAAGATTATTTGGGAGCCTTACAAAAATGCATTGGACAATTTGTCCAATATTCGTAAGAACGGTCAAGACATATGGCGGACCATCAGTCCTCTCATATGTTTTCATATTGGAGAGTGGATTATTCTAATAAGGTGATCAGATAGTTCAGTTTTAAACAAAATATCCCATCAGAATGCAATACTAAGCTACTCTTGCACAACATTGACCTGAGAAATACGGATTGGTCAGATAAGGTCACATATTTGGTAGTGCGATGACAATCGCATAGAAGATTCATTGTGATGGGAGCTTCAATTCAACAATTCAATTGAAAGGTGACTCAAGAATACATCAACTGGTATAATAATATTACGATGCTTTACATCACTCGATCGGGTGCAGTCGTAGGTCATCTAGTACATATTTAAATATTGTATAATTACTTTAAATTATATACTAAATTAAATATTTTCTAATTTTTTATTTTGCAATTCATAGAGATGGAACAACATTAAAGTTCGTGATGTTGCAGATGATCCACAGTCAGTTCTTGATATATCCAAAAATAATGTGAGGTACATAGAAGAGCTACATTATATGTAAGATGTACCTATTGTACCTTCACCAGTTCATATGGGATGTGCTCGAGTGGAATAAGCTAAACTCGATGAGGTTTACCATAATGTGGAAGACGTGCTCCTATGACACAGACCCAAAGCCAGACTGGTTATGGTAGTCCGATAACAATGATGTCAGCATTTGGCCCAGGGTATTGTGATTCAGAGACCTGCATAGGATATTTTGATTCAGGAGTCGATCTATCTTCTTCGTACATGGATGTCGGTCCACCAACTTCATACATGCATAGACACGAAAGGGGTCGTGAAGAACATAACGAATACCTATACTATGAAACACCTGCAAAGGTGTTGGATCCACAAAAGTACCAACAAGAACCAGAGAATCAAGATGATCCAGAACAACATAGAGTTCAAAGTCAACGGCGACAACCAGCTCAAAATTGA

mRNA sequence

ATGGCTCCACAGCTTCAACATGTCAACGATCATCTACTACCTGGACGAGCATACGGTTCACGACGTGCTCCTATGACACAGACCCAAAGCCAGACTGGTTATGGTAGTCCGATAACAATGATGTCAGCATTTGGCCCAGGGTATTGTGATTCAGAGACCTGCATAGGATATTTTGATTCAGGAGTCGATCTATCTTCTTCGTACATGGATGTCGGTCCACCAACTTCATACATGCATAGACACGAAAGGGGTCGTGAAGAACATAACGAATACCTATACTATGAAACACCTGCAAAGGTGTTGGATCCACAAAAGTACCAACAAGAACCAGAGAATCAAGATGATCCAGAACAACATAGAGTTCAAAGTCAACGGCGACAACCAGCTCAAAATTGA

Coding sequence (CDS)

ATGGCTCCACAGCTTCAACATGTCAACGATCATCTACTACCTGGACGAGCATACGGTTCACGACGTGCTCCTATGACACAGACCCAAAGCCAGACTGGTTATGGTAGTCCGATAACAATGATGTCAGCATTTGGCCCAGGGTATTGTGATTCAGAGACCTGCATAGGATATTTTGATTCAGGAGTCGATCTATCTTCTTCGTACATGGATGTCGGTCCACCAACTTCATACATGCATAGACACGAAAGGGGTCGTGAAGAACATAACGAATACCTATACTATGAAACACCTGCAAAGGTGTTGGATCCACAAAAGTACCAACAAGAACCAGAGAATCAAGATGATCCAGAACAACATAGAGTTCAAAGTCAACGGCGACAACCAGCTCAAAATTGA

Protein sequence

MAPQLQHVNDHLLPGRAYGSRRAPMTQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHERGREEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN

Homology

[Close]

BLAST of PI0008323 vs. ExPASy TrEMBL
Match: A0A5D3CXX3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001390 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 9.2e-34
Identity = 76/108 (70.37%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 24  PMTQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHER 83
           P TQTQSQTGYGSP+ MM  FG GYCDSE   GY+D+G+   SSYMDVGP  SYMH H R
Sbjct: 35  PTTQTQSQTGYGSPMMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGR 94

Query: 84  GREEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN 132
           G  EHNEYLY+E PA V D Q+YQQEPENQ+D EQHRVQS+RRQP +N
Sbjct: 95  GYGEHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 142

[Close]

BLAST of PI0008323 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.6e-33
Identity = 77/108 (71.30%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 24  PMTQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHER 83
           P TQTQSQTGYGSP+TMM  FG GYCDSE  IGY+D+ V   SSYMDVGP TSYM+ H R
Sbjct: 384 PTTQTQSQTGYGSPMTMMPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYMYGHGR 443

Query: 84  GREEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN 132
           G  EHNEYLY+E P  V D Q+YQQEP+NQ+D EQHRVQS+RRQPA+N
Sbjct: 444 GYGEHNEYLYHEAPTDVSDRQEYQQEPKNQEDREQHRVQSRRRQPARN 491

[Close]

BLAST of PI0008323 vs. ExPASy TrEMBL
Match: A0A5D3BSG8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00130 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 6.0e-33
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 26  TQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHERGR 85
           TQTQSQTGYGSP+TMM  F  GYCD E  IGY+D+GV  SSSY+DV P TSYMH H RG 
Sbjct: 96  TQTQSQTGYGSPMTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGY 155

Query: 86  EEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN 132
            EHNEYLY+E PA V D Q+YQQEPENQ+D EQHRVQS+RRQP +N
Sbjct: 156 GEHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 201

[Close]

BLAST of PI0008323 vs. ExPASy TrEMBL
Match: A0A5A7V342 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001560 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 6.0e-33
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 26  TQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHERGR 85
           TQTQSQTGYGSP+TMM  F  GYCD E  IGY+D+GV  SSSY+DV P TSYMH H RG 
Sbjct: 108 TQTQSQTGYGSPMTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRGY 167

Query: 86  EEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN 132
            EHNEYLY+E PA V D Q+YQQEPENQ+D EQHRVQS+RRQP +N
Sbjct: 168 GEHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 213

[Close]

BLAST of PI0008323 vs. ExPASy TrEMBL
Match: A0A5D3BMS3 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00070 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 7.8e-33
Identity = 76/108 (70.37%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 24  PMTQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHER 83
           P TQTQSQTGYGSP+TMM  FG GYCDS+   GY+D+GV  SSSYMDV P TSYMH H R
Sbjct: 41  PTTQTQSQTGYGSPMTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGR 100

Query: 84  GREEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN 132
           G  +HNEYLY+E PA V D Q+YQQEPENQ+D EQHRVQ + RQPA+N
Sbjct: 101 GYGKHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 148

[Close]

BLAST of PI0008323 vs. NCBI nr
Match: KAA0049532.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK16210.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 1.9e-33
Identity = 76/108 (70.37%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 24  PMTQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHER 83
           P TQTQSQTGYGSP+ MM  FG GYCDSE   GY+D+G+   SSYMDVGP  SYMH H R
Sbjct: 35  PTTQTQSQTGYGSPMMMMPTFGAGYCDSEVSTGYYDAGIGPLSSYMDVGPSNSYMHGHGR 94

Query: 84  GREEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN 132
           G  EHNEYLY+E PA V D Q+YQQEPENQ+D EQHRVQS+RRQP +N
Sbjct: 95  GYGEHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 142

[Close]

BLAST of PI0008323 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 152.1 bits (383), Expect = 3.2e-33
Identity = 77/108 (71.30%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 24  PMTQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHER 83
           P TQTQSQTGYGSP+TMM  FG GYCDSE  IGY+D+ V   SSYMDVGP TSYM+ H R
Sbjct: 384 PTTQTQSQTGYGSPMTMMPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYMYGHGR 443

Query: 84  GREEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN 132
           G  EHNEYLY+E P  V D Q+YQQEP+NQ+D EQHRVQS+RRQPA+N
Sbjct: 444 GYGEHNEYLYHEAPTDVSDRQEYQQEPKNQEDREQHRVQSRRRQPARN 491

[Close]

BLAST of PI0008323 vs. NCBI nr
Match: KAA0062642.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-32
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 26  TQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHERGR 85
           TQTQSQTGYGSP+TMM  F  GYCD E  IGY+D+GV  SSSY+DV P TSYMH H RG 
Sbjct: 108 TQTQSQTGYGSPMTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRGY 167

Query: 86  EEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN 132
            EHNEYLY+E PA V D Q+YQQEPENQ+D EQHRVQS+RRQP +N
Sbjct: 168 GEHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 213

[Close]

BLAST of PI0008323 vs. NCBI nr
Match: TYK01176.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-32
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 26  TQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHERGR 85
           TQTQSQTGYGSP+TMM  F  GYCD E  IGY+D+GV  SSSY+DV P TSYMH H RG 
Sbjct: 96  TQTQSQTGYGSPMTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHRRGY 155

Query: 86  EEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN 132
            EHNEYLY+E PA V D Q+YQQEPENQ+D EQHRVQS+RRQP +N
Sbjct: 156 GEHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQSRRRQPTRN 201

[Close]

BLAST of PI0008323 vs. NCBI nr
Match: TYK01111.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-32
Identity = 76/108 (70.37%), Postives = 86/108 (79.63%), Query Frame = 0


Query: 24  PMTQTQSQTGYGSPITMMSAFGPGYCDSETCIGYFDSGVDLSSSYMDVGPPTSYMHRHER 83
           P TQTQSQTGYGSP+TMM  FG GYCDS+   GY+D+GV  SSSYMDV P TSYMH H R
Sbjct: 41  PTTQTQSQTGYGSPMTMMPTFGAGYCDSKIGTGYYDAGVGPSSSYMDVDPSTSYMHGHGR 100

Query: 84  GREEHNEYLYYETPAKVLDPQKYQQEPENQDDPEQHRVQSQRRQPAQN 132
           G  +HNEYLY+E PA V D Q+YQQEPENQ+D EQHRVQ + RQPA+N
Sbjct: 101 GYGKHNEYLYHEAPADVSDRQEYQQEPENQEDREQHRVQDRCRQPARN 148

The following BLAST results are available for this feature:

BLAST of PI0008323 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008323 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CXX3	9.2e-34	70.37	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5D3DJV7	1.6e-33	71.30	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5D3BSG8	6.0e-33	71.70	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]
A0A5A7V342	6.0e-33	71.70	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3BMS3	7.8e-33	70.37	GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va...	[more]

BLAST of PI0008323 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049532.1	1.9e-33	70.37	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK23842.1	3.2e-33	71.30	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0062642.1	1.2e-32	71.70	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
TYK01176.1	1.2e-32	71.70	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]
TYK01111.1	1.6e-32	70.37	GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var....	[more]

BLAST of PI0008323 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008323.1	PI0008323.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance