PI0008283 (gene) Melon (PI 482460) v1

Overview
NamePI0008283
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 12756010 .. 12757277 (+)
RNA-Seq ExpressionPI0008283
SyntenyPI0008283
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATGCGAATTGACAGTGGCCACTACCAAAATGATGTGTATCACGTATGGCACAGTAGGCAATCAAGGCTGCAAGTTCAACGCTGGATTTCCTTTGCCTCCTGGGAAGGGAAATAAAACAAAATATTTGAAAGGTTAGACGAAAACACCCAGTGAGTGGGATCTTTTATGTCAAATAAATAATAACTCAAATCAACCATTATAGAGAATCATTCTCTTTCTGAAATTTGTGTAAGATTCATATCGCATAAACATATTGGTCCGTGGGCCTTTATAAATCATTTGAAAATTATACTTCTCTTTTCAAAATGATGCGCCAATGTATATGACGCGTAAAAGCTCATCGCCAAATCATTCTGCGGTTTCATTACATCTTTGTACCCTTTTCTTAGCTCAAGCGTTTACCACACTCTTCTACCAAGTTGTAGCTAAGCGGAGTAATCTCAACGCGTTAGCCATTTCTATCAATTCATTACGTGTAATGCGTTTTCCAATTCCAAAACACACAACAAGCAAAGGACATCTCACACAAGAACACACAGGATGTACGAAGCATTCTATCCCAGAACACACAGCAAGAATAGAACATCTTATCCCAATACATACAACAAGAATAAGGCATCCCATACAAGATTACAAATATGAGGCATTTCATCGCATAGGGTACAAAAGATCATTTCATTACATTTTATCATTTTCAACTCATATTAAATCTCATTCATTTATACATTATGATCCTTTCAAGGAATAGAGAGCATGAGAGAAAACAAGTAACTTAAAGCTTTCATAAAGATATGTCTAAGGATGAAAACATGTTAGAAATCCTTTCATTTGTTTGAAAAACATTTTAAGGAGAACCACTCACAATAAACAGATGGCTTTCTCTCGCCTAGCTTCCCCATCAAGCCTTTTCCTTCTTTCATGCACTCTTGGTCAAATTGAGCTTCTGTAAATTCGAGGATTTTCTCCACTTTTATATGTAAGTTGAAAGTGAAAAACAACCCAAAATTGGTTGGACTTCATCTATTTATAGGCCTATTTGGTGACATTCTCCATGCAAAAATAATTTTTTCTGTCTGGCTGTGAGAATCACCCAATGCTAGAATGCCATGTGTCCAAGCTCATTCCTTATCCTAACTTGTGATTGGACGACAGAGTTAAATCAATCGCTGACTTTCTTATAGAAGGATGACATCATCTCTTTCTTGGGGAAGTAATCTCAATCGCGTAACTAGATTTCGCGTGATACTTCTCGTCGCGATGTAA

mRNA sequence

ATGCTATGCGAATTGACAGTGGCCACTACCAAAATGATGTGTATCACGTATGGCACAGTAGGCAATCAAGGCTGCAAGTTCAACGCTGGATTTCCTTTGCCTCCTGGGAAGGGAAATAAAACAAAATATTTGAAAGCTCAAGCGTTTACCACACTCTTCTACCAAGTTGTAGCTAAGCGGAGTAATCTCAACGCGTTAGCCATTTCTATCAATTCATTACGTGTAATGCGTTTTCCAATTCCAAAACACACAACAAGCAAAGGACATCTCACACAAGAACACACAGGATGTACGAAGCATTCTATCCCAGAACACACAGCAAGAATAGAACATCTTATCCCAATACATACAACAAGAATAAGGCATCCCATACAAGATTACAAATATGAGGCATTTCATCGCATAGGAAGGATGACATCATCTCTTTCTTGGGGAAGTAATCTCAATCGCGTAACTAGATTTCGCGTGATACTTCTCGTCGCGATGTAA

Coding sequence (CDS)

ATGCTATGCGAATTGACAGTGGCCACTACCAAAATGATGTGTATCACGTATGGCACAGTAGGCAATCAAGGCTGCAAGTTCAACGCTGGATTTCCTTTGCCTCCTGGGAAGGGAAATAAAACAAAATATTTGAAAGCTCAAGCGTTTACCACACTCTTCTACCAAGTTGTAGCTAAGCGGAGTAATCTCAACGCGTTAGCCATTTCTATCAATTCATTACGTGTAATGCGTTTTCCAATTCCAAAACACACAACAAGCAAAGGACATCTCACACAAGAACACACAGGATGTACGAAGCATTCTATCCCAGAACACACAGCAAGAATAGAACATCTTATCCCAATACATACAACAAGAATAAGGCATCCCATACAAGATTACAAATATGAGGCATTTCATCGCATAGGAAGGATGACATCATCTCTTTCTTGGGGAAGTAATCTCAATCGCGTAACTAGATTTCGCGTGATACTTCTCGTCGCGATGTAA

Protein sequence

MLCELTVATTKMMCITYGTVGNQGCKFNAGFPLPPGKGNKTKYLKAQAFTTLFYQVVAKRSNLNALAISINSLRVMRFPIPKHTTSKGHLTQEHTGCTKHSIPEHTARIEHLIPIHTTRIRHPIQDYKYEAFHRIGRMTSSLSWGSNLNRVTRFRVILLVAM
Homology
[Close]
BLAST of PI0008283 vs. ExPASy TrEMBL
Match: A0A5D3BG14 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00690 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-07
Identity = 38/83 (45.78%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 46  AQAFTTLFYQVVAKRSNLNALAISINSL-RVMRFPIPKHTTSKGHLTQEHTGCTKHSIPE 105
           AQAFTTLF QVVA    LN +    + L R++   +P+  + K H   +HT  ++HS PE
Sbjct: 2   AQAFTTLFCQVVAMGRGLNTIRKFPSILVRIIHHLMPEQASGKDHFIPDHTARSRHSTPE 61

Query: 106 HTARIEHLIPIHTTRIRHPIQDY 128
           HT R EHLI    TRIRH   D+
Sbjct: 62  HTERTEHLILDPKTRIRHLTPDH 84

[Close]
BLAST of PI0008283 vs. NCBI nr
Match: KAA0037904.1 (uncharacterized protein E6C27_scaffold36G00760 [Cucumis melo var. makuwa] >TYJ98036.1 uncharacterized protein E5676_scaffold487G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-07
Identity = 38/83 (45.78%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 46  AQAFTTLFYQVVAKRSNLNALAISINSL-RVMRFPIPKHTTSKGHLTQEHTGCTKHSIPE 105
           AQAFTTLF QVVA    LN +    + L R++   +P+  + K H   +HT  ++HS PE
Sbjct: 2   AQAFTTLFCQVVAMGRGLNTIRKFPSILVRIIHHLMPEQASGKDHFIPDHTARSRHSTPE 61

Query: 106 HTARIEHLIPIHTTRIRHPIQDY 128
           HT R EHLI    TRIRH   D+
Sbjct: 62  HTERTEHLILDPKTRIRHLTPDH 84

The following BLAST results are available for this feature:
BLAST of PI0008283 vs.
Match NameE-valueIdentityDescription
BLAST of PI0008283 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BG141.1e-0745.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0008283 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037904.12.2e-0745.78uncharacterized protein E6C27_scaffold36G00760 [Cucumis melo var. makuwa] >TYJ98... [more]
BLAST of PI0008283 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0008283.1PI0008283.1mRNA