PI0008056 (gene) Melon (PI 482460) v1

Overview


Name	PI0008056
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 5563517 .. 5564161 (-)
RNA-Seq Expression	PI0008056
Synteny	PI0008056

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACGAGCTCATTTAAAGCTCTTTCTTTCAACTTTCAACCCCTTCCTTTTTAAACACTTCAAACACACAACACACACACACACACAAACAATAACCGTATCATGGCTTCTCTTTTCCCATATTTCTTCATTTATCTCCTCTTCCTTCTTCTATCTTCTCCTACTCTATCTATGGGTGCTCGTTGCGTCCCTCCGAGCGCCCCTAGCACCATTGTTAGACCGCTTGCCACGCCCGACAATGCCGAAGACTACGAGACCGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGCAATGAAGTCAAAAGCTGCCTCCCTAAAGGCTTTCGACGATCCTCCGCCCCTAGTCGATTTGTTAATTACCATACTTCTGGTGGTTGTTCTCCAACTACTGATCATTCTATTAACACCAACCCTTGAGAAAATGGAAAAAGAAACAGAGAATATATGTTTTGTTTGTTCAATTTTTGTTGTATATGCTTTTCCCTTCTTCATCTAATTTATTTTATATATGTTCCTCATATATATATATCATAACTTTTGTTTATTCAATTTTTCTTATTATAATTTGTTCTTCAAAAATTGTGGAACCCCAACTCATGAACCTTGATTATATATATGATTAATTATTTGCTCT

mRNA sequence

TCACGAGCTCATTTAAAGCTCTTTCTTTCAACTTTCAACCCCTTCCTTTTTAAACACTTCAAACACACAACACACACACACACACAAACAATAACCGTATCATGGCTTCTCTTTTCCCATATTTCTTCATTTATCTCCTCTTCCTTCTTCTATCTTCTCCTACTCTATCTATGGGTGCTCGTTGCGTCCCTCCGAGCGCCCCTAGCACCATTGTTAGACCGCTTGCCACGCCCGACAATGCCGAAGACTACGAGACCGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGCAATGAAGTCAAAAGCTGCCTCCCTAAAGGCTTTCGACGATCCTCCGCCCCTAGTCGATTTGTTAATTACCATACTTCTGGTGGTTGTTCTCCAACTACTGATCATTCTATTAACACCAACCCTTGAGAAAATGGAAAAAGAAACAGAGAATATATGTTTTGTTTGTTCAATTTTTGTTGTATATGCTTTTCCCTTCTTCATCTAATTTATTTTATATATGTTCCTCATATATATATATCATAACTTTTGTTTATTCAATTTTTCTTATTATAATTTGTTCTTCAAAAATTGTGGAACCCCAACTCATGAACCTTGATTATATATATGATTAATTATTTGCTCT

Coding sequence (CDS)

ATGGCTTCTCTTTTCCCATATTTCTTCATTTATCTCCTCTTCCTTCTTCTATCTTCTCCTACTCTATCTATGGGTGCTCGTTGCGTCCCTCCGAGCGCCCCTAGCACCATTGTTAGACCGCTTGCCACGCCCGACAATGCCGAAGACTACGAGACCGTGAAGCCTCAACTTATTAACCGAAAGAGGCTGGTTTTTGGTGGCAATGAAGTCAAAAGCTGCCTCCCTAAAGGCTTTCGACGATCCTCCGCCCCTAGTCGATTTGTTAATTACCATACTTCTGGTGGTTGTTCTCCAACTACTGATCATTCTATTAACACCAACCCTTGA

Protein sequence

MASLFPYFFIYLLFLLLSSPTLSMGARCVPPSAPSTIVRPLATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP

Homology

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BLAST of PI0008056 vs. ExPASy TrEMBL
Match: A0A0A0KDD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.7e-49
Identity = 105/109 (96.33%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 1   MASLFPYFFIYLLF-LLLSSPTLSMGARCVPPSAPSTIVRPLATPDNAEDYETVKPQLIN 60
           MASLFPYFFIYLLF LLLSSPT SM ARCVPPSAPSTIVRPLATPDNAE YETVKPQLIN
Sbjct: 1   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLIN 60

Query: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 109
           RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 109

[Close]

BLAST of PI0008056 vs. ExPASy TrEMBL
Match: A0A5D3DGK4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00130 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.1e-39
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 24  MGARCVPPSAPSTIVRPL-ATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 83
           M ARCVPPSAPSTIVRPL ATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS
Sbjct: 1   MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 60

Query: 84  APSRFVNYHTSGGCSPTTDHSINTNP 109
           APSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61  APSRFVNYHTSGGCSPTTDHSINTNP 86

[Close]

BLAST of PI0008056 vs. ExPASy TrEMBL
Match: A0A803Q0F1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.2e-16
Identity = 50/99 (50.51%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 10  IYLLFLLLSSPTLSMGARCVPPSAPSTIVRPLATPDNAEDYETVKPQLINRKRLVFGGNE 69
           + +L LL+    +SMG R +P SAPST+VRPLAT D+ + Y T++P L   ++ VF   +
Sbjct: 24  VVVLLLLVCCLDVSMGGRAIPSSAPSTVVRPLAT-DDVQAYVTMRPHLNPGQKQVFRERD 83

Query: 70  VKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINTNP 109
            K CLPKGFR +SAPSRFVNYHT G  S  +  + +TNP
Sbjct: 84  FKGCLPKGFRHASAPSRFVNYHTLGATSGCSSINKHTNP 121

[Close]

BLAST of PI0008056 vs. ExPASy TrEMBL
Match: A0A2P5CZN8 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_109280 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 4.2e-16
Identity = 52/97 (53.61%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 3   SLFPYFFIY-LLFLLLSSPTLSMGARCVPPSAPSTIVRPLATPDNAEDYETVKPQLINRK 62
           SL+    +Y ++ LLLSS  +SM  R +P SAPST+VRPL T D  +DY +++P L   +
Sbjct: 27  SLYVMILLYSIILLLLSSFDVSMAGRAIPSSAPSTVVRPLVT-DADQDYVSLRPHLNPGQ 86

Query: 63  RLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSP 99
             VF G E K CLPKGFR +SAPSRFVNYH  G  SP
Sbjct: 87  NQVFRGREFKGCLPKGFRHASAPSRFVNYHPLGALSP 122

[Close]

BLAST of PI0008056 vs. ExPASy TrEMBL
Match: A0A314ZL66 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_14613 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.1e-16
Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 2  ASLFPYFFIYLLFLLLSSPTLSMGARCVPPSAPSTIVRPLATPDNAEDYETVKPQLINRK 61
          +S+F    IY L L  +   +S+ AR +P SAPST+VRPL T +  + Y ++KPQ +N K
Sbjct: 3  SSIFCVALIYSL-LFFTCFDVSLAARNIPSSAPSTMVRPLVT-EGLDHYASMKPQDLNHK 62

Query: 62 RLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSG-GCS 98
          + VF G EVK CLPKGFR +SAPSR+VNYHT G GCS
Sbjct: 63 QQVFHGTEVKDCLPKGFRHASAPSRYVNYHTLGQGCS 97

[Close]

BLAST of PI0008056 vs. NCBI nr
Match: KAE8646888.1 (hypothetical protein Csa_020968, partial [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 3.6e-46
Identity = 100/104 (96.15%), Postives = 100/104 (96.15%), Query Frame = 0


Query: 1   MASLFPYFFIYLLF-LLLSSPTLSMGARCVPPSAPSTIVRPLATPDNAEDYETVKPQLIN 60
           MASLFPYFFIYLLF LLLSSPT SM ARCVPPSAPSTIVRPLATPDNAE YETVKPQLIN
Sbjct: 3   MASLFPYFFIYLLFLLLLSSPTQSMCARCVPPSAPSTIVRPLATPDNAEAYETVKPQLIN 62

Query: 61  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS 104
           RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS
Sbjct: 63  RKRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHS 106

[Close]

BLAST of PI0008056 vs. NCBI nr
Match: KAG6570806.1 (hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174.5 bits (441), Expect = 5.0e-40
Identity = 92/106 (86.79%), Postives = 95/106 (89.62%), Query Frame = 0


Query: 1   MASLFPYFFIYLLFLLLSSPTLSMGARCVPPSAPSTIVRPLATPDNAEDYETVKPQLINR 60
           MASLFP+ F  L  LLLSSP+ SM ARCVPPSAPSTIV PLATP+ AEDYETVKPQL NR
Sbjct: 1   MASLFPFLFYLLFLLLLSSPSPSMAARCVPPSAPSTIVTPLATPE-AEDYETVKPQL-NR 60

Query: 61  KRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSPTTDHSINT 107
           KRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCS TTDHSINT
Sbjct: 61  KRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSSTTDHSINT 104

[Close]

BLAST of PI0008056 vs. NCBI nr
Match: KAA0035234.1 (hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa] >TYK22389.1 hypothetical protein E5676_scaffold173G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 4.3e-39
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 24  MGARCVPPSAPSTIVRPL-ATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 83
           M ARCVPPSAPSTIVRPL ATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS
Sbjct: 1   MCARCVPPSAPSTIVRPLAATPDNAEDYETVKPQLINRKRLVFGGNEVKSCLPKGFRRSS 60

Query: 84  APSRFVNYHTSGGCSPTTDHSINTNP 109
           APSRFVNYHTSGGCSPTTDHSINTNP
Sbjct: 61  APSRFVNYHTSGGCSPTTDHSINTNP 86

[Close]

BLAST of PI0008056 vs. NCBI nr
Match: KAF3961747.1 (hypothetical protein CMV_013666 [Castanea mollissima])

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-18
Identity = 58/95 (61.05%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 1  MASLFPYFFIYLLFLLLSSPTLSMGARCVPPSAPSTIVRPLATPDNAEDYETVKPQLINR 60
          M++ F Y  +  L LLLSS   +M AR +P SAPSTIVRPL +   A+DY T+KP L   
Sbjct: 1  MSTSFYYTLVLCLLLLLSSIDTNMAARKIPSSAPSTIVRPLVS--EAQDYVTMKP-LFKH 60

Query: 61 KRLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGG 96
          K  VF G EVKSCLPKGFR SSAPSRFVNYH  GG
Sbjct: 61 KHRVFRGKEVKSCLPKGFRHSSAPSRFVNYHALGG 92

[Close]

BLAST of PI0008056 vs. NCBI nr
Match: PON66506.1 (hypothetical protein PanWU01x14_109280, partial [Parasponia andersonii])

HSP 1 Score: 94.0 bits (232), Expect = 8.6e-16
Identity = 52/97 (53.61%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 3   SLFPYFFIY-LLFLLLSSPTLSMGARCVPPSAPSTIVRPLATPDNAEDYETVKPQLINRK 62
           SL+    +Y ++ LLLSS  +SM  R +P SAPST+VRPL T D  +DY +++P L   +
Sbjct: 27  SLYVMILLYSIILLLLSSFDVSMAGRAIPSSAPSTVVRPLVT-DADQDYVSLRPHLNPGQ 86

Query: 63  RLVFGGNEVKSCLPKGFRRSSAPSRFVNYHTSGGCSP 99
             VF G E K CLPKGFR +SAPSRFVNYH  G  SP
Sbjct: 87  NQVFRGREFKGCLPKGFRHASAPSRFVNYHPLGALSP 122

The following BLAST results are available for this feature:

BLAST of PI0008056 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008056 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDD3	1.7e-49	96.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147570 PE=4 SV=1	[more]
A0A5D3DGK4	2.1e-39	97.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A803Q0F1	3.2e-16	50.51	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A2P5CZN8	4.2e-16	53.61	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A314ZL66	7.1e-16	54.64	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_146...	[more]

BLAST of PI0008056 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646888.1	3.6e-46	96.15	hypothetical protein Csa_020968, partial [Cucumis sativus]	[more]
KAG6570806.1	5.0e-40	86.79	hypothetical protein SDJN03_29721, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0035234.1	4.3e-39	97.67	hypothetical protein E6C27_scaffold228G00110 [Cucumis melo var. makuwa] >TYK2238...	[more]
KAF3961747.1	5.4e-18	61.05	hypothetical protein CMV_013666 [Castanea mollissima]	[more]
PON66506.1	8.6e-16	53.61	hypothetical protein PanWU01x14_109280, partial [Parasponia andersonii]	[more]

BLAST of PI0008056 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36619	OS04G0208900 PROTEIN	coord: 8..101
None	No IPR available	PANTHER	PTHR36619:SF2	OS04G0208900 PROTEIN	coord: 8..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008056.1	PI0008056.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane