Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTTTTCTATTTTGGCTTGAACAAGGCGACACAACTGGCTGCTGATGCTGTGTTTGTAGGTGGTATGTTGAAAAGCTCCTACAACCAGATTAAGACAACGCTGGCCACAATGGCCAGCAATAATGAAGAATGGGATGAAGATGATTTCGGTAATCGTCCAGAAGGACGAGGAAGAAGCAAGGAAGGTATGGATAAGAACGTCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATCTTCTCAAATCTATGGCAATATAGCAAGTCAATACCACAGGAGGCTCTGTGCAGCGGCGAGCCAAGTTGATGATATGGGATGTGTGGGATGCGGCGGTCCTCATGATACTGATGCATGCCCACTCAACACAGAAACAGTCGCGTTCGTAAGGAACGACCCTTTCTCCAATACTTACAACCCTGGTTGGAGGAACCATCCTAACTTTGAATGGGGAGGAACGATTCAACAAAATCAAGGACGACATGGTGGTCAAGGTGACCGTTGCGAGGAAGCATCTAGCTCCCACGCAAGGTACCAAAACAACAAACCCCAACATTCCCATCATCAACAACAACTTACCACCACTACTCCATCCACTTCCTCATCCATGGAGAACCTCCTCCGCGAATACATGCAGAAAAATGATGCCCTTCTGCAAAGCCAAGCTTCATCAATCCGCAATCTGGAGGTACAATTAGGGCAGATAGCCAGCGACTTCTCCGGAAGACCACAGGGATCCCTCCCAAGTAATACAGAAACGTCAAGTCAGGCGGGAGGATCTGGAAAAGAGAAGTGTCACGCGGTGACACTGCGCAGCGGAAGGAATTTGACCATCTGCGATCCTGACACTGAATGTAGCAACCCCACTTCTCATTCTACTGCTGAGATTGGCAGCACAAGTAACATTCCTAATCTTCCTCGCAGCTCAAGTAACATTTCTCTTTAA
mRNA sequence
ATGGAGGTTTTCTATTTTGGCTTGAACAAGGCGACACAACTGGCTGCTGATGCTGTGTTTGTAGGTGGTATGTTGAAAAGCTCCTACAACCAGATTAAGACAACGCTGGCCACAATGGCCAGCAATAATGAAGAATGGGATGAAGATGATTTCGGTAATCGTCCAGAAGGACGAGGAAGAAGCAAGGAAGGGACAAATGACTGCGATGAACAATCTTCTCAAATCTATGGCAATATAGCAAGTCAATACCACAGGAGGCTCTGTGCAGCGGCGAGCCAAGTTGATGATATGGGATGTGTGGGATGCGGCGGTCCTCATGATACTGATGCATGCCCACTCAACACAGAAACAGTCGCGTACCAAAACAACAAACCCCAACATTCCCATCATCAACAACAACTTACCACCACTACTCCATCCACTTCCTCATCCATGGAGAACCTCCTCCGCGAATACATGCAGAAAAATGATGCCCTTCTGCAAAGCCAAGCTTCATCAATCCGCAATCTGGAGGTACAATTAGGGCAGATAGCCAGCGACTTCTCCGGAAGACCACAGGGATCCCTCCCAAGTAATACAGAAACGTCAAGTCAGGCGGGAGGATCTGGAAAAGAGAAGTGTCACGCGGTGACACTGCGCAGCGGAAGGAATTTGACCATCTGCGATCCTGACACTGAATGTAGCAACCCCACTTCTCATTCTACTGCTGAGATTGGCAGCACAAGTAACATTCCTAATCTTCCTCGCAGCTCAAGTAACATTTCTCTTTAA
Coding sequence (CDS)
ATGGAGGTTTTCTATTTTGGCTTGAACAAGGCGACACAACTGGCTGCTGATGCTGTGTTTGTAGGTGGTATGTTGAAAAGCTCCTACAACCAGATTAAGACAACGCTGGCCACAATGGCCAGCAATAATGAAGAATGGGATGAAGATGATTTCGGTAATCGTCCAGAAGGACGAGGAAGAAGCAAGGAAGGGACAAATGACTGCGATGAACAATCTTCTCAAATCTATGGCAATATAGCAAGTCAATACCACAGGAGGCTCTGTGCAGCGGCGAGCCAAGTTGATGATATGGGATGTGTGGGATGCGGCGGTCCTCATGATACTGATGCATGCCCACTCAACACAGAAACAGTCGCGTACCAAAACAACAAACCCCAACATTCCCATCATCAACAACAACTTACCACCACTACTCCATCCACTTCCTCATCCATGGAGAACCTCCTCCGCGAATACATGCAGAAAAATGATGCCCTTCTGCAAAGCCAAGCTTCATCAATCCGCAATCTGGAGGTACAATTAGGGCAGATAGCCAGCGACTTCTCCGGAAGACCACAGGGATCCCTCCCAAGTAATACAGAAACGTCAAGTCAGGCGGGAGGATCTGGAAAAGAGAAGTGTCACGCGGTGACACTGCGCAGCGGAAGGAATTTGACCATCTGCGATCCTGACACTGAATGTAGCAACCCCACTTCTCATTCTACTGCTGAGATTGGCAGCACAAGTAACATTCCTAATCTTCCTCGCAGCTCAAGTAACATTTCTCTTTAA
Protein sequence
MEVFYFGLNKATQLAADAVFVGGMLKSSYNQIKTTLATMASNNEEWDEDDFGNRPEGRGRSKEGTNDCDEQSSQIYGNIASQYHRRLCAAASQVDDMGCVGCGGPHDTDACPLNTETVAYQNNKPQHSHHQQQLTTTTPSTSSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQIASDFSGRPQGSLPSNTETSSQAGGSGKEKCHAVTLRSGRNLTICDPDTECSNPTSHSTAEIGSTSNIPNLPRSSSNISL
Homology
BLAST of PI0007709 vs. ExPASy TrEMBL
Match:
A0A5D3CC26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00270 PE=4 SV=1)
HSP 1 Score: 143.7 bits (361), Expect = 1.1e-30
Identity = 95/214 (44.39%), Postives = 119/214 (55.61%), Query Frame = 0
Query: 1 MEVFYFGLNKATQLAADAVFVGGMLKSSYNQIKTTLATMASNNEEWDEDDFGNRPE---- 60
ME FYFGL+K T +A+ VF GGML+SSYNQIK L TMASN++EW ++ FG+R +
Sbjct: 36 MEQFYFGLSKNTLQSANIVFTGGMLRSSYNQIKNMLDTMASNSQEWRDESFGSRNDSRGT 95
Query: 61 --GRGRSKEGTN---DCDEQSSQIYGNIASQYH-------RRLCAAASQVDDMGCVGCGG 120
RGR ++G + Q I NI R QV++MGCVGC
Sbjct: 96 KGNRGRIEDGIDMSIMVALQGQVIEMNILQSMALLQVNVVRSSVQMVQQVNEMGCVGCRA 155
Query: 121 PHDTDACPLNTETVAYQNNKPQHSHHQQQLTTTTPSTSSSMENLLREYMQKNDALLQSQA 180
PH+T+ACPLNTE VAY N P H TT + SQA
Sbjct: 156 PHNTNACPLNTEIVAYLKNDPTPIHIMWGGETTQ---------------------ISSQA 215
Query: 181 SSIRNLEVQLGQIASDFSGRPQGSLPSNTETSSQ 199
SSI+N+E+QLGQ+ SDFS RP+ S PSNTET +Q
Sbjct: 216 SSIKNMELQLGQLTSDFSRRPKRSFPSNTETPNQ 228
BLAST of PI0007709 vs. ExPASy TrEMBL
Match:
A0A5D3D2S0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00800 PE=4 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 4.7e-26
Identity = 91/220 (41.36%), Postives = 113/220 (51.36%), Query Frame = 0
Query: 24 MLKSSYNQIKTTLATMASNNEEWDEDDFGNRPEGRGRSKEGTN---------DCDEQSSQ 83
ML+SSY QIKTTL + +N++E +DD + E RGR+ G + +
Sbjct: 1 MLQSSYYQIKTTLDAITNNSQELRDDDLRLQHESRGRTDAGMDRNVIVALQGQVTKMKKL 60
Query: 84 IYGNIASQYHR--RLCAAASQVDDMGCVGCGGPHDTDACPLNTETVAYQNNKPQHS---- 143
+ SQ A QVD+M VGCG PH TDAC LN E AY + P +
Sbjct: 61 LQSMALSQVDAVGNYVQAVKQVDEMRPVGCGEPHTTDACLLNAEIAAYVKSYPYSNTYNA 120
Query: 144 ---------HHQ-------------QQLTTTTPSTSSSMENLLREYMQKNDALLQSQASS 203
H Q QQ TT TPS+ SSM LLR+YMQ+ DA +QSQ +S
Sbjct: 121 GNYRGEAPDHRQRHYDRPHYSAPQHQQATTNTPSSFSSMVALLRKYMQRKDAFMQSQTTS 180
Query: 204 IRNLEVQLGQIASDFSGRPQGSLPSNTETSSQAGGSGKEK 207
I NLE+ LGQ+A DFSGRP GSLPSN E + G K K
Sbjct: 181 IINLEIHLGQLAKDFSGRPHGSLPSNIEVPNHNNGVHKNK 220
BLAST of PI0007709 vs. ExPASy TrEMBL
Match:
A0A5A7TGS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00540 PE=4 SV=1)
HSP 1 Score: 117.5 bits (293), Expect = 8.4e-23
Identity = 68/105 (64.76%), Postives = 78/105 (74.29%), Query Frame = 0
Query: 147 NLLREYMQKNDALLQSQASSIRNLEVQLGQIASDFSGRPQGSLPSNTETSSQAGGSGKEK 206
N ++ Q NDALLQSQASSI+NLE+QLGQ+ S+ S RP+GSLPSNTET +Q GGSGKEK
Sbjct: 18 NFIQAMQQWNDALLQSQASSIKNLELQLGQLFSNISRRPKGSLPSNTETPNQVGGSGKEK 77
Query: 207 CHAVTLRSGRNLTICDPDTECSNPTSHSTAEIGSTSNIPNLPRSS 252
C VTLRS RNLTI +P E N TS ST +IGS SN N SS
Sbjct: 78 CQVVTLRSRRNLTIREPKFERRNSTSTSTTKIGSASNDSNPLNSS 122
BLAST of PI0007709 vs. ExPASy TrEMBL
Match:
A0A0A0KMN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G055570 PE=4 SV=1)
HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 0
Query: 93 QVDDMGCVGCGGPHDTDA-CPLNTETVAYQNNKPQH-SHHQQQLTTTTPSTSSSMENLLR 152
Q ++G V CGGP + CP + QH +HH + ++ S+ SME+L +
Sbjct: 18 QTAELGFVECGGPGEVSGYCPRKYH--EWPQQPIQHLNHHILNQSHSSSSSLPSMESLFQ 77
Query: 153 EYMQKNDALLQSQASSIRNLEVQLGQIASDFSGRPQGSLPSNTETSSQAGGSGKEKCHAV 212
EYMQ+NDALLQSQA+SI+NLE+Q+GQIA+D S +P+G+LPSNTE Q G SGKEKC AV
Sbjct: 78 EYMQRNDALLQSQAASIKNLELQMGQIANDISRQPKGTLPSNTEIPIQGGSSGKEKCQAV 137
BLAST of PI0007709 vs. ExPASy TrEMBL
Match:
A0A5D3DWD5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00200 PE=4 SV=1)
HSP 1 Score: 105.5 bits (262), Expect = 3.3e-19
Identity = 65/110 (59.09%), Postives = 75/110 (68.18%), Query Frame = 0
Query: 98 GCVGCGGPHDTDACPLNTETVAYQNNKPQHS---HH----QQQLTTTTPSTSSSMENLLR 157
GCV CG P + D + A + QH HH QQQ TT TPS SSSME L+R
Sbjct: 3 GCVRCGSPQNIDGGQGSYHGKASGYRQRQHQDRPHHSTPQQQQATTNTPSFSSSMETLIR 62
Query: 158 EYMQKNDALLQSQASSIRNLEVQLGQIASDFSGRPQGSLPSNTETSSQAG 201
YM++NDALLQSQA+SIRNLE+Q+GQIA DFS RPQ LPSNTE S+QAG
Sbjct: 63 GYMKRNDALLQSQATSIRNLELQMGQIAIDFSERPQVFLPSNTEMSNQAG 112
BLAST of PI0007709 vs. NCBI nr
Match:
KAA0048713.1 (hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa] >TYK07916.1 hypothetical protein E5676_scaffold265G00270 [Cucumis melo var. makuwa])
HSP 1 Score: 143.7 bits (361), Expect = 2.3e-30
Identity = 95/214 (44.39%), Postives = 119/214 (55.61%), Query Frame = 0
Query: 1 MEVFYFGLNKATQLAADAVFVGGMLKSSYNQIKTTLATMASNNEEWDEDDFGNRPE---- 60
ME FYFGL+K T +A+ VF GGML+SSYNQIK L TMASN++EW ++ FG+R +
Sbjct: 36 MEQFYFGLSKNTLQSANIVFTGGMLRSSYNQIKNMLDTMASNSQEWRDESFGSRNDSRGT 95
Query: 61 --GRGRSKEGTN---DCDEQSSQIYGNIASQYH-------RRLCAAASQVDDMGCVGCGG 120
RGR ++G + Q I NI R QV++MGCVGC
Sbjct: 96 KGNRGRIEDGIDMSIMVALQGQVIEMNILQSMALLQVNVVRSSVQMVQQVNEMGCVGCRA 155
Query: 121 PHDTDACPLNTETVAYQNNKPQHSHHQQQLTTTTPSTSSSMENLLREYMQKNDALLQSQA 180
PH+T+ACPLNTE VAY N P H TT + SQA
Sbjct: 156 PHNTNACPLNTEIVAYLKNDPTPIHIMWGGETTQ---------------------ISSQA 215
Query: 181 SSIRNLEVQLGQIASDFSGRPQGSLPSNTETSSQ 199
SSI+N+E+QLGQ+ SDFS RP+ S PSNTET +Q
Sbjct: 216 SSIKNMELQLGQLTSDFSRRPKRSFPSNTETPNQ 228
BLAST of PI0007709 vs. NCBI nr
Match:
XP_038874882.1 (uncharacterized protein LOC120067385 [Benincasa hispida])
HSP 1 Score: 132.5 bits (332), Expect = 5.2e-27
Identity = 100/282 (35.46%), Postives = 136/282 (48.23%), Query Frame = 0
Query: 1 MEVFYFGLNKATQLAADAVFVGGMLKSSYNQIKTTLATMASNNEEWDEDDFGNRPEGRGR 60
ME FY GLN+A+Q+AA+A GG++ SY + K L +A +N EW +D + R + + R
Sbjct: 36 METFYGGLNRASQMAANAAAAGGLMDKSYTEAKEILDRIAKHNMEWVDDTYDGRADRKKR 95
Query: 61 SKEGTNDCDEQ-----SSQI-----------YGNIASQYHRRLCAAASQVDDMGCVGCGG 120
S + N D S+Q+ GN ++Q L + + C+GCG
Sbjct: 96 S-QNVNSIDSNAIATLSAQVAMMTSLLQNITLGNASNQQKVNLVETFGK-PMVRCMGCGD 155
Query: 121 PHDTDACPLNTETVAYQNNKP------------------------QHSHH----QQQLTT 180
PH CP N V + N P HH QQQ
Sbjct: 156 PHSYADCPQNPYLVCFIKNNPFSNTYNNPGCIIRILIHISWIGGNHQEHHPRANQQQRNG 215
Query: 181 TTP--------------------STSSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQ 219
P S+ S +E LL+EY+ +ND LL+SQASSIRNLE+Q+GQ
Sbjct: 216 PPPAFQQMHQPHQQPFNRGGHASSSGSLLEKLLKEYIAQNDVLLKSQASSIRNLEIQVGQ 275
BLAST of PI0007709 vs. NCBI nr
Match:
KAA0040852.1 (hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK17828.1 hypothetical protein E5676_scaffold306G00800 [Cucumis melo var. makuwa])
HSP 1 Score: 128.3 bits (321), Expect = 9.8e-26
Identity = 91/220 (41.36%), Postives = 113/220 (51.36%), Query Frame = 0
Query: 24 MLKSSYNQIKTTLATMASNNEEWDEDDFGNRPEGRGRSKEGTN---------DCDEQSSQ 83
ML+SSY QIKTTL + +N++E +DD + E RGR+ G + +
Sbjct: 1 MLQSSYYQIKTTLDAITNNSQELRDDDLRLQHESRGRTDAGMDRNVIVALQGQVTKMKKL 60
Query: 84 IYGNIASQYHR--RLCAAASQVDDMGCVGCGGPHDTDACPLNTETVAYQNNKPQHS---- 143
+ SQ A QVD+M VGCG PH TDAC LN E AY + P +
Sbjct: 61 LQSMALSQVDAVGNYVQAVKQVDEMRPVGCGEPHTTDACLLNAEIAAYVKSYPYSNTYNA 120
Query: 144 ---------HHQ-------------QQLTTTTPSTSSSMENLLREYMQKNDALLQSQASS 203
H Q QQ TT TPS+ SSM LLR+YMQ+ DA +QSQ +S
Sbjct: 121 GNYRGEAPDHRQRHYDRPHYSAPQHQQATTNTPSSFSSMVALLRKYMQRKDAFMQSQTTS 180
Query: 204 IRNLEVQLGQIASDFSGRPQGSLPSNTETSSQAGGSGKEK 207
I NLE+ LGQ+A DFSGRP GSLPSN E + G K K
Sbjct: 181 IINLEIHLGQLAKDFSGRPHGSLPSNIEVPNHNNGVHKNK 220
BLAST of PI0007709 vs. NCBI nr
Match:
XP_030494802.1 (uncharacterized protein LOC115710583 [Cannabis sativa])
HSP 1 Score: 122.9 bits (307), Expect = 4.1e-24
Identity = 91/247 (36.84%), Postives = 127/247 (51.42%), Query Frame = 0
Query: 1 MEVFYFGLNKATQLAADAVFVGGMLKSSYNQIKTTLATMASNNEEWDEDDFGNRPEGRGR 60
+E FY GLN A+++ DA G +L SYN+ L +ASNN +W NR R
Sbjct: 118 LETFYNGLNAASRMVLDASANGAILSKSYNEAFEILERIASNNYQWST----NRAP-TSR 177
Query: 61 SKEGTNDCDEQSSQIYGNIASQYH---------RRLCAAASQVDDMGCVGCGGPHDTDAC 120
G + D ++ + +AS + AA Q ++ CV CG H + C
Sbjct: 178 KVAGVLEVDALTA-LTAQMASMTNILKNMNMGGSVQPAATIQRAEISCVYCGDGHTFENC 237
Query: 121 PLNTETVAY----------------------QNNKPQHSHHQQQLTTTTPSTSSSMENLL 180
P N +V Y Q +PQ H Q S +SS+E+L+
Sbjct: 238 PSNPASVCYVGASSSGAEQAQGKQSFPPGFSQQPRPQQPHQPQ------GSQTSSLESLM 297
Query: 181 REYMQKNDALLQSQASSIRNLEVQLGQIASDFSGRPQGSLPSNTETSSQAGGSGKEKCHA 217
R+YM KNDA++QSQA+S++NLE+QLGQ+A+D RPQG+LPS+TE + GKE C A
Sbjct: 298 RDYMAKNDAVIQSQAASLQNLEIQLGQLANDLKNRPQGTLPSDTENPRR---DGKEHCKA 349
BLAST of PI0007709 vs. NCBI nr
Match:
XP_030505532.1 (uncharacterized protein LOC115720524 [Cannabis sativa])
HSP 1 Score: 119.0 bits (297), Expect = 5.9e-23
Identity = 88/268 (32.84%), Postives = 127/268 (47.39%), Query Frame = 0
Query: 1 MEVFYFGLNKATQLAADAVFVGGMLKSSYNQIKTTLATMASNNEEWDEDDFGNRPEGRGR 60
ME FY GLN A+++ DA G +L SYN+ L T+ASNN +W P R
Sbjct: 96 METFYNGLNAASRMVLDASANGAILSKSYNEAFEILETIASNNYQWSNT---RTPTSR-- 155
Query: 61 SKEGTNDCDEQSSQIYGNIASQYHRRL-CAAASQVDDMGCVGCGGPHDTDACPLNTETVA 120
+ + + N++ + + AAA Q DD+ CV CG H + CP N E+V
Sbjct: 156 ----------KVAGVLENLSIGNSKNIQPAAAIQSDDVSCVYCGEGHVFEKCPSNPESVC 215
Query: 121 YQNN--------------------------------------------------KPQHSH 180
Y N +P+HS
Sbjct: 216 YMGNQNFNRNNGAFSNSYNQAWKNHPNLSWGGQGASSSTAPAQGRQAYPPGFSQQPRHSQ 275
Query: 181 HQQQLTTTTPSTSSSMENLLREYMQKNDALLQSQASSIRNLEVQLGQIASDFSGRPQGSL 218
H Q S SS+E+L+R+YM K DA++QSQ +S+RNLE+QLG +A++ RPQGSL
Sbjct: 276 HAQN------SQPSSLESLMRDYMAKIDAVIQSQVASLRNLELQLGHLANELKARPQGSL 335
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3CC26 | 1.1e-30 | 44.39 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3D2S0 | 4.7e-26 | 41.36 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7TGS2 | 8.4e-23 | 64.76 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KMN3 | 1.1e-19 | 51.64 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G055570 PE=4 SV=1 | [more] |
A0A5D3DWD5 | 3.3e-19 | 59.09 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0048713.1 | 2.3e-30 | 44.39 | hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa] >TYK07916... | [more] |
XP_038874882.1 | 5.2e-27 | 35.46 | uncharacterized protein LOC120067385 [Benincasa hispida] | [more] |
KAA0040852.1 | 9.8e-26 | 41.36 | hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa] >TYK1782... | [more] |
XP_030494802.1 | 4.1e-24 | 36.84 | uncharacterized protein LOC115710583 [Cannabis sativa] | [more] |
XP_030505532.1 | 5.9e-23 | 32.84 | uncharacterized protein LOC115720524 [Cannabis sativa] | [more] |
Match Name | E-value | Identity | Description | |