PI0007700 (gene) Melon (PI 482460) v1

Overview


Name	PI0007700
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Seed nucellus-specific protein
Location	chr11: 2697173 .. 2697597 (-)
RNA-Seq Expression	PI0007700
Synteny	PI0007700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGACGATCGGTAAGAATCTCGTTGCCGTGCTCGCAATCTCAACACTGGCAATGATGTTTATGGAAAATGTTGAAGGAGGAAGAGAGATGGGCTTGAAGGAAGCAACAAAAGCATACAATGGTCACGTTTTGAACGAAAATGTGGAATACAAACCTAAGGAGGAATATGATTGTGATGGATACAAACCTAAAGACAAAGATTGTGATGAATATGGTAACTGTGACAAATCCCCCTATCCCGACGATGACGATGGTCAATACAATTGGAATTCGTACAAGAAACCAGTGCCGAAGTCGAAAGAGGTGGATGAAAAGTATGGAGTTCACAAGAATTTCCCCTGAGAGTAGCAATGCTAAAACAACCTCCATAAGCATAGTATTGCTTATGGATTGTATGAATAAAATATGAGTATAGGTCTTAT

mRNA sequence

ATGATGACGATCGGTAAGAATCTCGTTGCCGTGCTCGCAATCTCAACACTGGCAATGATGTTTATGGAAAATGTTGAAGGAGGAAGAGAGATGGGCTTGAAGGAAGCAACAAAAGCATACAATGGTCACGTTTTGAACGAAAATGTGGAATACAAACCTAAGGAGGAATATGATTGTGATGGATACAAACCTAAAGACAAAGATTGTGATGAATATGGTAACTGTGACAAATCCCCCTATCCCGACGATGACGATGGTCAATACAATTGGAATTCGTACAAGAAACCAGTGCCGAAGTCGAAAGAGGTGGATGAAAAGTATGGAGTTCACAAGAATTTCCCCTGAGAGTAGCAATGCTAAAACAACCTCCATAAGCATAGTATTGCTTATGGATTGTATGAATAAAATATGAGTATAGGTCTTAT

Coding sequence (CDS)

ATGATGACGATCGGTAAGAATCTCGTTGCCGTGCTCGCAATCTCAACACTGGCAATGATGTTTATGGAAAATGTTGAAGGAGGAAGAGAGATGGGCTTGAAGGAAGCAACAAAAGCATACAATGGTCACGTTTTGAACGAAAATGTGGAATACAAACCTAAGGAGGAATATGATTGTGATGGATACAAACCTAAAGACAAAGATTGTGATGAATATGGTAACTGTGACAAATCCCCCTATCCCGACGATGACGATGGTCAATACAATTGGAATTCGTACAAGAAACCAGTGCCGAAGTCGAAAGAGGTGGATGAAAAGTATGGAGTTCACAAGAATTTCCCCTGA

Protein sequence

MMTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKAYNGHVLNENVEYKPKEEYDCDGYKPKDKDCDEYGNCDKSPYPDDDDGQYNWNSYKKPVPKSKEVDEKYGVHKNFP

Homology

[Close]

BLAST of PI0007700 vs. ExPASy TrEMBL
Match: A0A0A0KAR7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.7e-45
Identity = 98/117 (83.76%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 1   MMTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKAYNGHVLNENVEYKPKE-EYDC 60
           MMT GKNLVAVLA STLAMMFMENVEG R+MGLKEATKAYNG VLNE +EY P E EYDC
Sbjct: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC 60

Query: 61  DGYKPKDKDCDEYGNCDKSPY--PDDDDGQYNWNSYKKPVPKSKEVDEKYGVHKNFP 115
           DGYK KDKDC +YGNCDKSPY   DDDDGQYNWNSYK PVPK KEVDEKY VHKNFP
Sbjct: 61  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP 117

[Close]

BLAST of PI0007700 vs. ExPASy TrEMBL
Match: A0A5D3CS37 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00050 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.5e-44
Identity = 96/114 (84.21%), Postives = 99/114 (86.84%), Query Frame = 0


Query: 1   MMTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKAYNGHVLNENVEYKPKEEYDCD 60
           MM IGKNLVAVLAISTL MMFMENVEGGREMGLKEATKAYNGHV NENV+YKPKEE  CD
Sbjct: 1   MMMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVSNENVDYKPKEEDGCD 60

Query: 61  GYKPKDKDCDEYGNCDKSPYPDDDDGQYNWNSYKKPVPKSKEVDEKYGVHKNFP 115
           GYK KDKDC EYGNC KSPYPD DDGQYNWNS+ KPVPK KE+DEKY   KN P
Sbjct: 61  GYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKEMDEKY---KNIP 111

[Close]

BLAST of PI0007700 vs. ExPASy TrEMBL
Match: O22351 (Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.6e-32
Identity = 78/116 (67.24%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 1   MMTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKAYNGHVLNENVE-YKPKEEYDC 60
           M  +GK LVA+L IS +AM  +ENVEGGREMGLKEAT     HVLNE  E YKPKE+Y+C
Sbjct: 1   MKIVGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYKPKEDYEC 60

Query: 61  DGYKPKDKDCDEYGNCDKSPY-PDDDDGQYNWNSYKKPVPKSKEVDEKYGVHKNFP 115
           DGYK KDK+C EYGNCDKSPY  ++DD QYN + YKKP+PK KE+  KYGVH NFP
Sbjct: 61  DGYKYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEMARKYGVHHNFP 116

[Close]

BLAST of PI0007700 vs. ExPASy TrEMBL
Match: A0A5A7VLH5 (Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00080 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.9e-29
Identity = 71/123 (57.72%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 2   MTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKA---------YNGHVLNENVE-Y 61
           MTI K L+A+L +S +AM  +ENVEGGREM  K+ T           Y G+   E+ E Y
Sbjct: 1   MTISKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTYPQELDDNYEGYKPKEDYEGY 60

Query: 62  KPKEEYDCDGYKPKDKDCDEYGNCDKSPYPDDDDGQYNWNSYKKPVPKSKEVDEKYGVHK 115
           KPKE+Y+CDGYK KDKDC EYGNCDKSPY +D D QYNW  YKKP+ K KE+ EKYGVH+
Sbjct: 61  KPKEDYECDGYKYKDKDCYEYGNCDKSPYNEDVDHQYNWGPYKKPITKPKEMGEKYGVHQ 120

[Close]

BLAST of PI0007700 vs. ExPASy TrEMBL
Match: A0A0A0L8T2 (Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.9e-27
Identity = 70/132 (53.03%), Postives = 85/132 (64.39%), Query Frame = 0


Query: 2   MTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKAYNGHVLNENVE----------- 61
           MTI K LVA+L +S +AM F+ENVEGGREM LK+ T       L+EN E           
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60

Query: 62  --------YKPKEEYDCDGYKPKDKDCDEYGNCDKSPYPDDDDGQYNWNSYKKPVPKSKE 115
                   YKPKE+Y+CDGYK  DKDC EYGNCDKSPY +D D QYNW   KKP+ K KE
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPKE 120

[Close]

BLAST of PI0007700 vs. NCBI nr
Match: KGN46573.1 (hypothetical protein Csa_005092 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 1.6e-44
Identity = 98/117 (83.76%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 1   MMTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKAYNGHVLNENVEYKPKE-EYDC 60
           MMT GKNLVAVLA STLAMMFMENVEG R+MGLKEATKAYNG VLNE +EY P E EYDC
Sbjct: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC 60

Query: 61  DGYKPKDKDCDEYGNCDKSPY--PDDDDGQYNWNSYKKPVPKSKEVDEKYGVHKNFP 115
           DGYK KDKDC +YGNCDKSPY   DDDDGQYNWNSYK PVPK KEVDEKY VHKNFP
Sbjct: 61  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYKVHKNFP 117

[Close]

BLAST of PI0007700 vs. NCBI nr
Match: TYK14008.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 96/114 (84.21%), Postives = 99/114 (86.84%), Query Frame = 0


Query: 1   MMTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKAYNGHVLNENVEYKPKEEYDCD 60
           MM IGKNLVAVLAISTL MMFMENVEGGREMGLKEATKAYNGHV NENV+YKPKEE  CD
Sbjct: 1   MMMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVSNENVDYKPKEEDGCD 60

Query: 61  GYKPKDKDCDEYGNCDKSPYPDDDDGQYNWNSYKKPVPKSKEVDEKYGVHKNFP 115
           GYK KDKDC EYGNC KSPYPD DDGQYNWNS+ KPVPK KE+DEKY   KN P
Sbjct: 61  GYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKEMDEKY---KNIP 111

[Close]

BLAST of PI0007700 vs. NCBI nr
Match: AAB82329.1 (seed nucellus-specific protein [Citrullus lanatus])

HSP 1 Score: 147.9 bits (372), Expect = 5.3e-32
Identity = 78/116 (67.24%), Postives = 90/116 (77.59%), Query Frame = 0


Query: 1   MMTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKAYNGHVLNENVE-YKPKEEYDC 60
           M  +GK LVA+L IS +AM  +ENVEGGREMGLKEAT     HVLNE  E YKPKE+Y+C
Sbjct: 1   MKIVGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYKPKEDYEC 60

Query: 61  DGYKPKDKDCDEYGNCDKSPY-PDDDDGQYNWNSYKKPVPKSKEVDEKYGVHKNFP 115
           DGYK KDK+C EYGNCDKSPY  ++DD QYN + YKKP+PK KE+  KYGVH NFP
Sbjct: 61  DGYKYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEMARKYGVHHNFP 116

[Close]

BLAST of PI0007700 vs. NCBI nr
Match: KAA0068070.1 (Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucellus-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-28
Identity = 71/123 (57.72%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 2   MTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKA---------YNGHVLNENVE-Y 61
           MTI K L+A+L +S +AM  +ENVEGGREM  K+ T           Y G+   E+ E Y
Sbjct: 1   MTISKVLIAILVVSAVAMTLLENVEGGREMAPKKPTAKTYPQELDDNYEGYKPKEDYEGY 60

Query: 62  KPKEEYDCDGYKPKDKDCDEYGNCDKSPYPDDDDGQYNWNSYKKPVPKSKEVDEKYGVHK 115
           KPKE+Y+CDGYK KDKDC EYGNCDKSPY +D D QYNW  YKKP+ K KE+ EKYGVH+
Sbjct: 61  KPKEDYECDGYKYKDKDCYEYGNCDKSPYNEDVDHQYNWGPYKKPITKPKEMGEKYGVHQ 120

[Close]

BLAST of PI0007700 vs. NCBI nr
Match: KAE8650853.1 (hypothetical protein Csa_001704, partial [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 4.5e-23
Identity = 65/121 (53.72%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 2   MTIGKNLVAVLAISTLAMMFMENVEGGREMGLKEATKAYNGHVLNENVE----------- 61
           MTI K LVA+L +S +AM F+ENVEGGREM LK+ T       L+EN E           
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60

Query: 62  --------YKPKEEYDCDGYKPKDKDCDEYGNCDKSPYPDDDDGQYNWNSYKKPVPKSKE 104
                   YKPKE+Y+CDGYK  DKDC EYGNCDKSPY +D D QYNW   KKP+ K KE
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPKE 120

The following BLAST results are available for this feature:

BLAST of PI0007700 vs.


Match Name	E-value	Identity	Description

BLAST of PI0007700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAR7	7.7e-45	83.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1	[more]
A0A5D3CS37	6.5e-44	84.21	Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
O22351	2.6e-32	67.24	Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1	[more]
A0A5A7VLH5	5.9e-29	57.72	Seed nucellus-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0L8T2	1.9e-27	53.03	Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 S...	[more]

BLAST of PI0007700 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46573.1	1.6e-44	83.76	hypothetical protein Csa_005092 [Cucumis sativus]	[more]
TYK14008.1	1.3e-43	84.21	Seed nucellus-specific protein [Cucumis melo var. makuwa]	[more]
AAB82329.1	5.3e-32	67.24	seed nucellus-specific protein [Citrullus lanatus]	[more]
KAA0068070.1	1.2e-28	57.72	Seed nucellus-specific protein [Cucumis melo var. makuwa] >TYK26054.1 Seed nucel...	[more]
KAE8650853.1	4.5e-23	53.72	hypothetical protein Csa_001704, partial [Cucumis sativus]	[more]

BLAST of PI0007700 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007700.1	PI0007700.1	mRNA