PI0007694 (gene) Melon (PI 482460) v1

Overview


Name	PI0007694
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 23859563 .. 23860678 (-)
RNA-Seq Expression	PI0007694
Synteny	PI0007694

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCACCGCCCCTGTCACAGCCGCAAGAATCTGAACCCGAGGCCCAAGGGGAACTGTCGCAGCCCCAAGAATTTGATTCAATGGATCCGCTGCAAAAATCTGAGCCCCAGGCCCCAGTGAAACAACTCCAGCCCCAAGAATTTGATCCAGTGGATCCGCCGCAAGAATCTGAACCCCATGCCCTGGCCAATCTACCGCAAGAATTCGATCCAGTGAATCCGTCGCAAGAATCTGATTCAGTGGATCCGCCGGAAGAATCTGAGTCTCCTCGTCCTAGACTTGTTATGCTGGATACGGCCGCGAAGTTAGCGCATAAACTGGTATTAGCGCATAAACTGGTATTCATTGTTAACAATTATTTTCACTGCTCGTTATTTAAATGTAAATCGTTATGGTTTTAGAAAAAAAAATGTTACGAATAGTGTTCTAATCTTATTATTTATTATTCCTTCTCTTGTGTGCACAGTTAGAGAAGTGGTATAAAGAAGCTGGTAAGGTTGCAAATGAGGACGACGAAGCAACTGCGGCTAATCATTCTAGACCTCCAAGGTTAATGCATACTACTTTACTTTGAATTAGTTAGAACGTTAATCCAAATAGGCCGTGTATTAATTAACAACGATTTCATCAAGACTTGGACTCGGTGGAGAGATGTCGAAAGAACTAGGAGATGAGGATGGTTTTGAGTCTTTTGACCCATTTTATGGCCGGAATCTCTCGAGTCGAATGGCTGGGTTCGATCCATGTGATTTAAGTCAGTATGCTGGGAGATTTGTTGCTGCCACGAGGCCAACAGAGCCTGAGACTTTTAATGTGACAGACAATTATGTGATTGTGAAGACATATAAGTCTGATGATGAGAAAGATAACGATACTGATGAAAAGGATGAGGAAGCTAACGATACTGAGAAAGACAACGATTCTGAGGAAGATAATTATGATACTGATGAAAAGGATGAAGAAGCTAATGATACTGAGAAAGACAATGATACCGAGAAAGACAATGATTCCGAGGAAGATAATGATGCGCATGATCAAAGGGATTAGACAATTATGATAAATTTGCTGCTTTTGTACGTATAATCTGCCTTACAACAAGTATATTTTCATGC

mRNA sequence

ATGGCTCCACCGCCCCTGTCACAGCCGCAAGAATCTGAACCCGAGGCCCAAGGGGAACTGTCGCAGCCCCAAGAATTTGATTCAATGGATCCGCTGCAAAAATCTGAGCCCCAGGCCCCAGTGAAACAACTCCAGCCCCAAGAATTTGATCCAGTGGATCCGCCGCAAGAATCTGAACCCCATGCCCTGGCCAATCTACCGCAAGAATTCGATCCAGTGAATCCGTCGCAAGAATCTGATTCAGTGGATCCGCCGGAAGAATCTGAGTCTCCTCGTCCTAGACTTGTTATGCTGGATACGGCCGCGAAGTTAGCGCATAAACTGTTAGAGAAGTGGTATAAAGAAGCTGGTAAGGTTGCAAATGAGGACGACGAAGCAACTGCGGCTAATCATTCTAGACCTCCAAGACTTGGACTCGGTGGAGAGATGTCGAAAGAACTAGGAGATGAGGATGGTTTTGAGTCTTTTGACCCATTTTATGGCCGGAATCTCTCGAGTCGAATGGCTGGGTTCGATCCATGTGATTTAAGTCAGTATGCTGGGAGATTTGTTGCTGCCACGAGGCCAACAGAGCCTGAGACTTTTAATGTGACAGACAATTATGTGATTGTGAAGACATATAAGTCTGATGATGAGAAAGATAACGATACTGATGAAAAGGATGAGGAAGCTAACGATACTGAGAAAGACAACGATTCTGAGGAAGATAATTATGATACTGATGAAAAGGATGAAGAAGCTAATGATACTGAGAAAGACAATGATACCGAGAAAGACAATGATTCCGAGGAAGATAATGATGCGCATGATCAAAGGGATTAGACAATTATGATAAATTTGCTGCTTTTGTACGTATAATCTGCCTTACAACAAGTATATTTTCATGC

Coding sequence (CDS)

ATGGCTCCACCGCCCCTGTCACAGCCGCAAGAATCTGAACCCGAGGCCCAAGGGGAACTGTCGCAGCCCCAAGAATTTGATTCAATGGATCCGCTGCAAAAATCTGAGCCCCAGGCCCCAGTGAAACAACTCCAGCCCCAAGAATTTGATCCAGTGGATCCGCCGCAAGAATCTGAACCCCATGCCCTGGCCAATCTACCGCAAGAATTCGATCCAGTGAATCCGTCGCAAGAATCTGATTCAGTGGATCCGCCGGAAGAATCTGAGTCTCCTCGTCCTAGACTTGTTATGCTGGATACGGCCGCGAAGTTAGCGCATAAACTGTTAGAGAAGTGGTATAAAGAAGCTGGTAAGGTTGCAAATGAGGACGACGAAGCAACTGCGGCTAATCATTCTAGACCTCCAAGACTTGGACTCGGTGGAGAGATGTCGAAAGAACTAGGAGATGAGGATGGTTTTGAGTCTTTTGACCCATTTTATGGCCGGAATCTCTCGAGTCGAATGGCTGGGTTCGATCCATGTGATTTAAGTCAGTATGCTGGGAGATTTGTTGCTGCCACGAGGCCAACAGAGCCTGAGACTTTTAATGTGACAGACAATTATGTGATTGTGAAGACATATAAGTCTGATGATGAGAAAGATAACGATACTGATGAAAAGGATGAGGAAGCTAACGATACTGAGAAAGACAACGATTCTGAGGAAGATAATTATGATACTGATGAAAAGGATGAAGAAGCTAATGATACTGAGAAAGACAATGATACCGAGAAAGACAATGATTCCGAGGAAGATAATGATGCGCATGATCAAAGGGATTAG

Protein sequence

MAPPPLSQPQESEPEAQGELSQPQEFDSMDPLQKSEPQAPVKQLQPQEFDPVDPPQESEPHALANLPQEFDPVNPSQESDSVDPPEESESPRPRLVMLDTAAKLAHKLLEKWYKEAGKVANEDDEATAANHSRPPRLGLGGEMSKELGDEDGFESFDPFYGRNLSSRMAGFDPCDLSQYAGRFVAATRPTEPETFNVTDNYVIVKTYKSDDEKDNDTDEKDEEANDTEKDNDSEEDNYDTDEKDEEANDTEKDNDTEKDNDSEEDNDAHDQRD

Homology

[Close]

BLAST of PI0007694 vs. ExPASy TrEMBL
Match: A0A0A0KAJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014740 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43
Identity = 146/303 (48.18%), Postives = 170/303 (56.11%), Query Frame = 0


Query: 1   MAPPPLSQPQESEPEAQGELSQPQEFDSMDPLQKSEPQAPVKQLQPQEFDPVDPPQESEP 60
           MAP PL QPQ+                       S+PQAPVKQLQPQEF   DPPQES+P
Sbjct: 1   MAPLPLPQPQD-----------------------SQPQAPVKQLQPQEF---DPPQESQP 60

Query: 61  HALANLPQEFDPVNPSQESDSVDPPEESESPRPRLVMLDTAAKLAHKLLEKWYKEAGKVA 120
           HALA L QE DP         VDPPEESESPRPR+V+L+ AAKLA+KLL KWYK+AGKV+
Sbjct: 61  HALAKLLQESDP---------VDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVS 120

Query: 121 N-EDDEATAANHSRPPRL------------------GLGGEMSKELGDEDGFESFDPF-- 180
           N E+ EATAANHSRPPR+                  G+     + L   D +     +  
Sbjct: 121 NDENHEATAANHSRPPRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKS 180

Query: 181 ------------------YGRNLSSRMAGFDPCDLSQYAGRFVAATRPTEPETFNVTDNY 240
                             Y +        FDP +LSQ A R+VA  RPTE ET NVTD+Y
Sbjct: 181 DAEEDIILFVLFLLNYKAYHQQHFRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDY 240

Query: 241 VIVKTYKSDDEKDNDTDEKDEEANDTEKDNDSEEDNYDTDEKDEEANDTEKDNDTEKDND 265
           VIVKTYKSD E D    EK EE N TEKDND+EED           NDT+KDNDTE+DND
Sbjct: 241 VIVKTYKSDAEDDIAHGEKAEEDNATEKDNDAEED-----------NDTDKDNDTEEDND 257

[Close]

BLAST of PI0007694 vs. NCBI nr
Match: XP_031743735.1 (protein bfr2-like [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 5.3e-46
Identity = 152/285 (53.33%), Postives = 176/285 (61.75%), Query Frame = 0


Query: 1   MAPPPLSQPQESEPEAQGELSQPQEFDSMDPLQKSEPQAPVKQLQPQEFDPVDPPQESEP 60
           MAP PL QPQ+                       S+PQAPVKQLQPQEF   DPPQES+P
Sbjct: 1   MAPLPLPQPQD-----------------------SQPQAPVKQLQPQEF---DPPQESQP 60

Query: 61  HALANLPQEFDPVNPSQESDSVDPPEESESPRPRLVMLDTAAKLAHKLLEKWYKEAGKVA 120
           HALA L QE DP         VDPPEESESPRPR+V+L+ AAKLA+KLL KWYK+AGKV+
Sbjct: 61  HALAKLLQESDP---------VDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVS 120

Query: 121 N-EDDEATAANHSRPPRLGLGGEMSKELGDEDGFESFDPFYGRNLSSRMAGFDPCDLSQY 180
           N E+ EATAANHSRPPR+                 SFDPF               +LSQ 
Sbjct: 121 NDENHEATAANHSRPPRI---------------CRSFDPF---------------ELSQN 180

Query: 181 AGRFVAATRPTEPETFNVTDNYVIVKTYKSD----------DEKDNDTDEKDEEANDTEK 240
           A R+VA  RPTE ET NVTD+YVIVKTYKSD           E+DN   EK EE N TEK
Sbjct: 181 AVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDIANGEKAEEDNANGEKAEEDNATEK 220

Query: 241 DNDSEEDNYDTDEKD-EEANDTEKDNDTEKDNDSEEDNDAHDQRD 274
           DND+EEDN    + D EE NDT+KDND ++DND+E+DNDA++  D
Sbjct: 241 DNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDND 220

[Close]

BLAST of PI0007694 vs. NCBI nr
Match: KAE8646583.1 (hypothetical protein Csa_005569, partial [Cucumis sativus])

HSP 1 Score: 172.9 bits (437), Expect = 3.7e-39
Identity = 120/223 (53.81%), Postives = 135/223 (60.54%), Query Frame = 0


Query: 1   MAPPPLSQPQESEPEAQGELSQPQEFDSMDPLQKSEPQAPVKQLQPQEFDPVDPPQESEP 60
           MAP PL QPQ+                       S+PQAPVKQLQPQEF   DPPQES+P
Sbjct: 1   MAPLPLPQPQD-----------------------SQPQAPVKQLQPQEF---DPPQESQP 60

Query: 61  HALANLPQEFDPVNPSQESDSVDPPEESESPRPRLVMLDTAAKLAHKLLEKWYKEAGKVA 120
           HALA L QE DP         VDPPEESESPRPR+V+L+ AAKLA+KLL KWYK+AGKV+
Sbjct: 61  HALAKLLQESDP---------VDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVS 120

Query: 121 N-EDDEATAANHSRPPRLGLGGEMSKELGDEDGFESFDPFYGRNLSSRMAGFDPCDLSQY 180
           N E+ EATAANHSRPPR+                 SFDPF               +LSQ 
Sbjct: 121 NDENHEATAANHSRPPRI---------------CRSFDPF---------------ELSQN 158

Query: 181 AGRFVAATRPTEPETFNVTDNYVIVKTYKSDDEKDNDTDEKDE 223
           A R+VA  RPTE ET NVTD+YVIVKTYKSD E+D    EK E
Sbjct: 181 AVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDIANGEKAE 158

The following BLAST results are available for this feature:

BLAST of PI0007694 vs.


Match Name	E-value	Identity	Description

BLAST of PI0007694 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAJ4	2.0e-43	48.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014740 PE=4 SV=1	[more]

BLAST of PI0007694 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743735.1	5.3e-46	53.33	protein bfr2-like [Cucumis sativus]	[more]
KAE8646583.1	3.7e-39	53.81	hypothetical protein Csa_005569, partial [Cucumis sativus]	[more]

BLAST of PI0007694 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 217..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007694.1	PI0007694.1	mRNA