PI0007648 (gene) Melon (PI 482460) v1

Overview
NamePI0007648
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 12821903 .. 12822523 (-)
RNA-Seq ExpressionPI0007648
SyntenyPI0007648
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGACCTCTGCGATACTGAGTTAGAAGATTTCAGAGAGTCTCAAGACGCGACATTGGCACCTGAGTCGCAAACCACTGTCTTTCTCGATGAGCCGGTTGATGACCCAACTTCACAAGAAAATCAAACAACTGTTGTGGAAGTTGGCAAGACGCGGGCTCTTTCACCGCCTAAGCAAATTGCAAACCCACCACCCCACGCGGCGGAAGAGAATGATGATGAGGAATTCTTCAAATACATTGATGAGACTGTCACCAAGCCAATGACTAATGGATTTGAAGAAGTCTTCCAAACCCAAGTCAGTCTGAAAGAACTTGTGGCAAAACATGAGAAGCAGATCTTAGAATTGGGAACAAAAGTGGATAACTACCATCAATCGCAAAAAGACTAGCTCGCATCTGAAGTCGCTAGTCTGAAGGAGCAAAACAAGGCGATTGTGGGATTGATCAAGAAGGCATCTTTGCGGTCTGACAGGCAATACAAGTCAATGATGAATTACATCCACGCGGCCATCACAAGCCTCGTGCCTAAGCCTGCCATTCCGCCTGAGTTTGAAACCCCCCTTTCTGATGATGAAGACGCCGCCGCGACAGGACCTTCCGATGCGGCTATAAACTAA

mRNA sequence

ATGCAAGACCTCTGCGATACTGAGTTAGAAGATTTCAGAGAGTCTCAAGACGCGACATTGGCACCTGAGTCGCAAACCACTGTCTTTCTCGATGAGCCGGTTGATGACCCAACTTCACAAGAAAATCAAACAACTGTTGTGGAAGTTGGCAAGACGCGGGCTCTTTCACCGCCTAAGCAAATTGCAAACCCACCACCCCACGCGGCGGAAGAGAATGATGATGAGGAATTCTTCAAATACATTGATGAGACTGTCACCAAGCCAATGACTAATGGATTTGAAGAAGTCTTCCAAACCCAACTCGCATCTGAAGTCGCTAGTCTGAAGGAGCAAAACAAGGCGATTGTGGGATTGATCAAGAAGGCATCTTTGCGGTCTGACAGGCAATACAAGTCAATGATGAATTACATCCACGCGGCCATCACAAGCCTCGTGCCTAAGCCTGCCATTCCGCCTGAGTTTGAAACCCCCCTTTCTGATGATGAAGACGCCGCCGCGACAGGACCTTCCGATGCGGCTATAAACTAA

Coding sequence (CDS)

ATGCAAGACCTCTGCGATACTGAGTTAGAAGATTTCAGAGAGTCTCAAGACGCGACATTGGCACCTGAGTCGCAAACCACTGTCTTTCTCGATGAGCCGGTTGATGACCCAACTTCACAAGAAAATCAAACAACTGTTGTGGAAGTTGGCAAGACGCGGGCTCTTTCACCGCCTAAGCAAATTGCAAACCCACCACCCCACGCGGCGGAAGAGAATGATGATGAGGAATTCTTCAAATACATTGATGAGACTGTCACCAAGCCAATGACTAATGGATTTGAAGAAGTCTTCCAAACCCAACTCGCATCTGAAGTCGCTAGTCTGAAGGAGCAAAACAAGGCGATTGTGGGATTGATCAAGAAGGCATCTTTGCGGTCTGACAGGCAATACAAGTCAATGATGAATTACATCCACGCGGCCATCACAAGCCTCGTGCCTAAGCCTGCCATTCCGCCTGAGTTTGAAACCCCCCTTTCTGATGATGAAGACGCCGCCGCGACAGGACCTTCCGATGCGGCTATAAACTAA

Protein sequence

MQDLCDTELEDFRESQDATLAPESQTTVFLDEPVDDPTSQENQTTVVEVGKTRALSPPKQIANPPPHAAEENDDEEFFKYIDETVTKPMTNGFEEVFQTQLASEVASLKEQNKAIVGLIKKASLRSDRQYKSMMNYIHAAITSLVPKPAIPPEFETPLSDDEDAAATGPSDAAIN
Homology
BLAST of PI0007648 vs. ExPASy TrEMBL
Match: A0A5A7VKU1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00210 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.6e-09
Identity = 56/172 (32.56%), Postives = 87/172 (50.58%), Query Frame = 0

Query: 10  EDFRESQDATLAP-ESQTTVFLDEPVDDPTSQENQTTVVEVGKTRALSPPKQIANPPPHA 69
           ++ ++ +DA L P  S     L++ +DD   +  Q     VG+T   SPPKQ +      
Sbjct: 58  DEIKDPKDAPLVPVGSPRKEVLEKNIDDSLLKGKQIVFEVVGQTYPPSPPKQRSKQQDTT 117

Query: 70  AEENDDEEFFKYIDETVTKPMTNGFEEVFQTQLASEVASLKEQNKA-------IVGLIKK 129
            E +D++E+ K+                   ++ S++A LK QN+A       +   IK+
Sbjct: 118 KESDDEDEYVKF------------------EKIESDIAMLKTQNEAMQTQIQTMKTFIKQ 177

Query: 130 ASLRSDRQYKSMMNYIHAAITSLVPKPAIPPEFETPLSDDE--DAAATGPSD 172
           ASL ++ Q +++MNYIH  I SLVP P  PPE E PL++ E    AA  PS+
Sbjct: 178 ASLWTEMQCRTLMNYIHVTIVSLVPTPIFPPELEEPLTEVEPGPCAAVEPSE 211

BLAST of PI0007648 vs. ExPASy TrEMBL
Match: A0A5A7URK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00540 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 9.8e-07
Identity = 33/90 (36.67%), Postives = 58/90 (64.44%), Query Frame = 0

Query: 70  EENDDEEF-FKYIDETVTKPMTNGFEEV-----FQTQLASEVASLKEQNKAIVGLIKKAS 129
           EE  DE++  K+ID+   KPM NGFE++        +L +++  ++EQN+ ++GL KK  
Sbjct: 15  EETIDEDYTLKFIDDYACKPMNNGFEDIKGLKAEMNELKTQLQKIREQNETLMGLEKKNV 74

Query: 130 LRSDRQYKSMMNYIHAAITSLVPKPAIPPE 154
           + +D Q+KS + Y++AAI +++P   +P E
Sbjct: 75  MHTDVQFKSALRYLYAAIWNIIPILEVPTE 104

BLAST of PI0007648 vs. ExPASy TrEMBL
Match: A0A5A7T7V1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001610 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.5e-04
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 0

Query: 4   LCD--TELED-FRESQDATLAP-ESQTTVFLDEPVDDPTSQENQTTVVEVGKTRALSPPK 63
           +CD  T +ED  +  +D +L P  S     L++ VDDP  +    T     +T   SPPK
Sbjct: 11  VCDPFTPIEDEIKNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKGITSKIASETHPPSPPK 70

Query: 64  QIANPPPHAAEENDDEEFFKYIDETVTKPMTNGFEEVFQTQLASEVASLKEQ 112
           + +     A E +D +E+FK+I+    KPM +GFE++FQ Q   + + L+ Q
Sbjct: 71  ETSKQHDTAKESDDKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSQ 122

BLAST of PI0007648 vs. NCBI nr
Match: KAA0067817.1 (hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-09
Identity = 56/172 (32.56%), Postives = 87/172 (50.58%), Query Frame = 0

Query: 10  EDFRESQDATLAP-ESQTTVFLDEPVDDPTSQENQTTVVEVGKTRALSPPKQIANPPPHA 69
           ++ ++ +DA L P  S     L++ +DD   +  Q     VG+T   SPPKQ +      
Sbjct: 58  DEIKDPKDAPLVPVGSPRKEVLEKNIDDSLLKGKQIVFEVVGQTYPPSPPKQRSKQQDTT 117

Query: 70  AEENDDEEFFKYIDETVTKPMTNGFEEVFQTQLASEVASLKEQNKA-------IVGLIKK 129
            E +D++E+ K+                   ++ S++A LK QN+A       +   IK+
Sbjct: 118 KESDDEDEYVKF------------------EKIESDIAMLKTQNEAMQTQIQTMKTFIKQ 177

Query: 130 ASLRSDRQYKSMMNYIHAAITSLVPKPAIPPEFETPLSDDE--DAAATGPSD 172
           ASL ++ Q +++MNYIH  I SLVP P  PPE E PL++ E    AA  PS+
Sbjct: 178 ASLWTEMQCRTLMNYIHVTIVSLVPTPIFPPELEEPLTEVEPGPCAAVEPSE 211

BLAST of PI0007648 vs. NCBI nr
Match: KAA0056255.1 (hypothetical protein E6C27_scaffold226G00220 [Cucumis melo var. makuwa] >TYK05244.1 hypothetical protein E5676_scaffold108G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-06
Identity = 33/90 (36.67%), Postives = 58/90 (64.44%), Query Frame = 0

Query: 70  EENDDEEF-FKYIDETVTKPMTNGFEEV-----FQTQLASEVASLKEQNKAIVGLIKKAS 129
           EE  DE++  K+ID+   KPM NGFE++        +L +++  ++EQN+ ++GL KK  
Sbjct: 15  EETIDEDYTLKFIDDYACKPMNNGFEDIKGLKAEMNELKTQLQKIREQNETLMGLEKKNV 74

Query: 130 LRSDRQYKSMMNYIHAAITSLVPKPAIPPE 154
           + +D Q+KS + Y++AAI +++P   +P E
Sbjct: 75  MHTDVQFKSALRYLYAAIWNIIPILEVPTE 104

BLAST of PI0007648 vs. NCBI nr
Match: KAA0038296.1 (hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 55.1 bits (131), Expect = 7.2e-04
Identity = 38/112 (33.93%), Postives = 60/112 (53.57%), Query Frame = 0

Query: 4   LCD--TELED-FRESQDATLAP-ESQTTVFLDEPVDDPTSQENQTTVVEVGKTRALSPPK 63
           +CD  T +ED  +  +D +L P  S     L++ VDDP  +    T     +T   SPPK
Sbjct: 11  VCDPFTPIEDEIKNLEDVSLVPVGSPRKEVLEKVVDDPLLKGKGITSKIASETHPPSPPK 70

Query: 64  QIANPPPHAAEENDDEEFFKYIDETVTKPMTNGFEEVFQTQLASEVASLKEQ 112
           + +     A E +D +E+FK+I+    KPM +GFE++FQ Q   + + L+ Q
Sbjct: 71  ETSKQHDTAKESDDKDEYFKFIENNFGKPMRDGFEDMFQCQANFQESQLRSQ 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VKU11.6e-0932.56Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7URK69.8e-0736.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T7V13.5e-0433.93Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0067817.13.3e-0932.56hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa][more]
KAA0056255.12.0e-0636.67hypothetical protein E6C27_scaffold226G00220 [Cucumis melo var. makuwa] >TYK0524... [more]
KAA0038296.17.2e-0433.93hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0007648.1PI0007648.1mRNA