PI0007614 (gene) Melon (PI 482460) v1

Overview


Name	PI0007614
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 20197931 .. 20199108 (-)
RNA-Seq Expression	PI0007614
Synteny	PI0007614

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCTCTTCTTCTTCTTCTCTTCTCAAAAACCCCATTTCCCATTTCAATTTCCATTACCCAATTCAGGGTTTTGAGTAATTTCCCCTTCTCCAAAGTTTCCTCGGTGGTGGGGGCGGCGGTGCTGATTCATAGGGTGAAGGGGTTGCTGTGAAAGAGATAAAGAGAACATTCTGAGGTTGGCCTTTTGTGTTTGTGTAGCTGTGGTGGCTGTCAAACATGAGGCACAGCTCATTTCTTTGATGGGTTCCCCTTTATCTTTACCTTTACCTTTACTTTTTGCTGTTTTTCTTTCTTTCTTGTCTCTGTGGCCTGTGGGGTTCTTTCACAATATCACTCCTCGCTTCTCTCAACAATGTTTCTGATTGTTGTGCCCATCGATATTTGATTCTTCGTGTTTGATAATCCACTTACTCCTCTTTCGTCCTTTTTTAGGTATTCATGCATTTCTTTAACTTTTATCTTCTTACTGTTGTATTCTTCCCTTTTTCTCTATGCTTTCTTTTTTCACTTACGCCCCTCCTTTTGCTTTCCTCTGCTTCATTTCTTCTTTCTAGCATACCCCATTTCCCCTTTTGTTTTATTTTCCAGAGATTTTCCAAATCGATTCAGCTTCTTCAGCTCTTACTTGTTTGGTAACTCTTATTTTTGTGTCTTCCATTCGTTGAACCTGTGTAATATCTTGATTCGACGAATTTTCAAAAGGGTTTAATAAAAGGATCCATGTGATTTTCTTGATTTCTTCTTCTCAATTTTAGTTCCAGTTCTCAGTTGTAACAACTTGGCTGTGCTGTGTCTATGTTCTCAACTTACAATGGATGTTTGTATTTGCAGTTTCAGGTGTTGAGCTTTCTAATCCAAGTGGAGAAAGTGAGGAAAAGCTTGAGGAGGACAGTGGACTGGGAATTTTGAGTTGTGAGACTCTGCAGATTGGAGAGGATTTTTGGTGTTTGACCCATTGGAAAGGAAAGGAAAAAGTAAATAAAGAACCAACAAGGAAGACAAAATCTAGAAGGGAAGGATAAACAAATAAGGGAAAGGACGGTGGTGTCAGGTATTAGCAAGTGGGGGTGTCTCCAGCTTTGCGAATTATATACGTTTTAAGAGTGTTTTCATAGTAATGTCACACCCATTCGACCCTCTATCTCCGGGGTCCTTGGGAAGTGTTACTCCTTGA

mRNA sequence

ATGGGTCTCTTCTTCTTCTTCTCTTCTCAAAAACCCCATTTCCCATTTCAATTTCCATTACCCAATTCAGGGGGTTGCTGTGAAAGAGATAAAGAGAACATTCTGAGGTTGGCCTTTTGTGTTTGTGTAGCTGTGGTGGCTGTCAAACATGAGGCACAGCTCATTTCTTTGATGGGTTCCCCTTTATCTTTACCTTTACCTTTACTTTTTGCTGTTTTTCTTTCTTTCTTGTCTCTGTGGCCTGTGGGAGATTTTCCAAATCGATTCAGCTTCTTCAGCTCTTACTTGTTTGTTTCAGGTGTTGAGCTTTCTAATCCAAGTGGAGAAAGTGAGGAAAAGCTTGAGGAGGACAGTGGACTGGGAATTTTGAGTTGTGAGACTCTGCAGATTGGAGAGGATTTTTGGTGTTTGACCCATTGGAAAGGAAAGGAAAAAGTATTAGCAAGTGGGGGTGTCTCCAGCTTTGCGAATTATATACGTTTTAAGAGTGTTTTCATAGTAATGTCACACCCATTCGACCCTCTATCTCCGGGGTCCTTGGGAAGTGTTACTCCTTGA

Coding sequence (CDS)

ATGGGTCTCTTCTTCTTCTTCTCTTCTCAAAAACCCCATTTCCCATTTCAATTTCCATTACCCAATTCAGGGGGTTGCTGTGAAAGAGATAAAGAGAACATTCTGAGGTTGGCCTTTTGTGTTTGTGTAGCTGTGGTGGCTGTCAAACATGAGGCACAGCTCATTTCTTTGATGGGTTCCCCTTTATCTTTACCTTTACCTTTACTTTTTGCTGTTTTTCTTTCTTTCTTGTCTCTGTGGCCTGTGGGAGATTTTCCAAATCGATTCAGCTTCTTCAGCTCTTACTTGTTTGTTTCAGGTGTTGAGCTTTCTAATCCAAGTGGAGAAAGTGAGGAAAAGCTTGAGGAGGACAGTGGACTGGGAATTTTGAGTTGTGAGACTCTGCAGATTGGAGAGGATTTTTGGTGTTTGACCCATTGGAAAGGAAAGGAAAAAGTATTAGCAAGTGGGGGTGTCTCCAGCTTTGCGAATTATATACGTTTTAAGAGTGTTTTCATAGTAATGTCACACCCATTCGACCCTCTATCTCCGGGGTCCTTGGGAAGTGTTACTCCTTGA

Protein sequence

MGLFFFFSSQKPHFPFQFPLPNSGGCCERDKENILRLAFCVCVAVVAVKHEAQLISLMGSPLSLPLPLLFAVFLSFLSLWPVGDFPNRFSFFSSYLFVSGVELSNPSGESEEKLEEDSGLGILSCETLQIGEDFWCLTHWKGKEKVLASGGVSSFANYIRFKSVFIVMSHPFDPLSPGSLGSVTP

Homology

[Close]

BLAST of PI0007614 vs. ExPASy TrEMBL
Match: A0A0A0KGH3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495080 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.1e-96
Identity = 180/187 (96.26%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MGLFFFF--SSQKPHFPFQFPLPNSGGCCERDKENILRLAFCVCVAVVAVKHEAQLISLM 60
           MGLFFFF  SSQKPHFPFQFPLPNSGGC ERDKENILRLAFCVCVAVVAVKHEAQLISLM
Sbjct: 1   MGLFFFFSSSSQKPHFPFQFPLPNSGGCRERDKENILRLAFCVCVAVVAVKHEAQLISLM 60

Query: 61  GSPLSLPLPLLFAVFLSFLSLWPVGDFPNRFSFFSSYLFVSGVELSNPSGESEEKLEEDS 120
           GSPLSLPLPLLFAVFLSFLSLWPVGDFPNRFSFFSS+LFVSGVELSNPSGE+EEKLEEDS
Sbjct: 61  GSPLSLPLPLLFAVFLSFLSLWPVGDFPNRFSFFSSHLFVSGVELSNPSGETEEKLEEDS 120

Query: 121 GLGILSCETLQIGEDFWCLTHWKGKEKVLASGGVSSFANYIRFKSVFIVMSHPFDPLSPG 180
           GLGILS ETLQIGEDFWCLTHWKGK+KVLASGGVSSFANYIRFKSVFIVMSHPFDPLSPG
Sbjct: 121 GLGILSRETLQIGEDFWCLTHWKGKKKVLASGGVSSFANYIRFKSVFIVMSHPFDPLSPG 180

Query: 181 SLGSVTP 186
           SLGSVTP
Sbjct: 181 SLGSVTP 187

[Close]

BLAST of PI0007614 vs. NCBI nr
Match: KGN48603.1 (hypothetical protein Csa_002719 [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 8.5e-96
Identity = 180/187 (96.26%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MGLFFFF--SSQKPHFPFQFPLPNSGGCCERDKENILRLAFCVCVAVVAVKHEAQLISLM 60
           MGLFFFF  SSQKPHFPFQFPLPNSGGC ERDKENILRLAFCVCVAVVAVKHEAQLISLM
Sbjct: 1   MGLFFFFSSSSQKPHFPFQFPLPNSGGCRERDKENILRLAFCVCVAVVAVKHEAQLISLM 60

Query: 61  GSPLSLPLPLLFAVFLSFLSLWPVGDFPNRFSFFSSYLFVSGVELSNPSGESEEKLEEDS 120
           GSPLSLPLPLLFAVFLSFLSLWPVGDFPNRFSFFSS+LFVSGVELSNPSGE+EEKLEEDS
Sbjct: 61  GSPLSLPLPLLFAVFLSFLSLWPVGDFPNRFSFFSSHLFVSGVELSNPSGETEEKLEEDS 120

Query: 121 GLGILSCETLQIGEDFWCLTHWKGKEKVLASGGVSSFANYIRFKSVFIVMSHPFDPLSPG 180
           GLGILS ETLQIGEDFWCLTHWKGK+KVLASGGVSSFANYIRFKSVFIVMSHPFDPLSPG
Sbjct: 121 GLGILSRETLQIGEDFWCLTHWKGKKKVLASGGVSSFANYIRFKSVFIVMSHPFDPLSPG 180

Query: 181 SLGSVTP 186
           SLGSVTP
Sbjct: 181 SLGSVTP 187

The following BLAST results are available for this feature:

BLAST of PI0007614 vs.


Match Name	E-value	Identity	Description

BLAST of PI0007614 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGH3	4.1e-96	96.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495080 PE=4 SV=1	[more]

BLAST of PI0007614 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48603.1	8.5e-96	96.26	hypothetical protein Csa_002719 [Cucumis sativus]	[more]

BLAST of PI0007614 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007614.1	PI0007614.1	mRNA