PI0007562 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTAACAAAGCTATTACATTACATTCTTGTCTTCATTTGGAAATCCCATTTCTCTTTTTAGTTAACTAATCCCACACAACTCCTCAACCCTTTCAATTTGGACCTTCAAATTTCATATATTCATCCATTACTCTATTTTCAAGAACAAGAAACAGAGGAAGAATGGAGAAGATGGGAGGAGTTGGATCATGTGTGTTGAATGGAAGCTTATCAATGCAAGATTTTTTGATTGATCGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACACGATGATCGGATTAGAAACGGAGCTGCTTGTTCTCATGCTCTGAAACTCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAAAAACTTCTCTCCTAATTCTTCATTCCTCTTCTAAAGTCTCTTCTCGTCAATCTATTAACTTTGAATTTCCTCCTTCTCCTCCTTTTGTTTCCCAATTTTCAGCATCTTCATAGAATTAGTAATTGATTTTTATGTTTTTAATGTGTTTTGAGATATTCTTCCCTGTTTTTGTTCCTTTTCTTGTTGTACTCTTCAGTTGTTTGTTATGTACAAATGGGAATGGAGCTTATCTTGACAAGGAAAGGCAAACTTTTTTCTTGTTGAGAGTTTGTGCAGTTGGATTATTATTAGTGTGAAATTAATGGGTACTTGAATGGTACAGTGTTGATTTTCCAGCACATATCTATGTGTATCTTATCACGATTTCGAATTATAGCTTATGAC CTTTAACAAAGCTATTACATTACATTCTTGTCTTCATTTGGAAATCCCATTTCTCTTTTTAGTTAACTAATCCCACACAACTCCTCAACCCTTTCAATTTGGACCTTCAAATTTCATATATTCATCCATTACTCTATTTTCAAGAACAAGAAACAGAGGAAGAATGGAGAAGATGGGAGGAGTTGGATCATGTGTGTTGAATGGAAGCTTATCAATGCAAGATTTTTTGATTGATCGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACACGATGATCGGATTAGAAACGGAGCTGCTTGTTCTCATGCTCTGAAACTCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAAAAACTTCTCTCCTAATTCTTCATTCCTCTTCTAAAGTCTCTTCTCGTCAATCTATTAACTTTGAATTTCCTCCTTCTCCTCCTTTTGTTTCCCAATTTTCAGCATCTTCATAGAATTAGTAATTGATTTTTATGTTTTTAATGTGTTTTGAGATATTCTTCCCTGTTTTTGTTCCTTTTCTTGTTGTACTCTTCAGTTGTTTGTTATGTACAAATGGGAATGGAGCTTATCTTGACAAGGAAAGGCAAACTTTTTTCTTGTTGAGAGTTTGTGCAGTTGGATTATTATTAGTGTGAAATTAATGGGTACTTGAATGGTACAGTGTTGATTTTCCAGCACATATCTATGTGTATCTTATCACGATTTCGAATTATAGCTTATGAC ATGGAGAAGATGGGAGGAGTTGGATCATGTGTGTTGAATGGAAGCTTATCAATGCAAGATTTTTTGATTGATCGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACACGATGATCGGATTAGAAACGGAGCTGCTTGTTCTCATGCTCTGAAACTCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAAAAACTTCTCTCCTAATTCTTCATTCCTCTTCTAAAGTCTCTTCTCGTCAATCTATTAACTTTGAATTTCCTCCTTCTCCTCCTTTTGTTTCCCAATTTTCAGCATCTTCATAG MEKMGGVGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFLKTQKCPKTSLLILHSSSKVSSRQSINFEFPPSPPFVSQFSASS Homology
BLAST of PI0007562 vs. ExPASy TrEMBL
Match: A0A5A7U781 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00690 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 6.3e-38 Identity = 87/104 (83.65%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of PI0007562 vs. ExPASy TrEMBL
Match: A0A0A0LZ02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265640 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.5e-34 Identity = 82/104 (78.85%), Postives = 86/104 (82.69%), Query Frame = 0
BLAST of PI0007562 vs. ExPASy TrEMBL
Match: A0A2P6RIE3 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086591 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 6.2e-09 Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of PI0007562 vs. ExPASy TrEMBL
Match: A0A2P6RIF2 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086581 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.1e-08 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of PI0007562 vs. ExPASy TrEMBL
Match: A0A1R3G2J8 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29281 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 5.2e-08 Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of PI0007562 vs. NCBI nr
Match: KAA0050036.1 (hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa] >TYK03640.1 hypothetical protein E5676_scaffold1369G00690 [Cucumis melo var. makuwa]) HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37 Identity = 87/104 (83.65%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of PI0007562 vs. NCBI nr
Match: KGN65216.1 (hypothetical protein Csa_019753 [Cucumis sativus]) HSP 1 Score: 153.3 bits (386), Expect = 1.1e-33 Identity = 82/104 (78.85%), Postives = 86/104 (82.69%), Query Frame = 0
BLAST of PI0007562 vs. NCBI nr
Match: KAG6587851.1 (hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 81.6 bits (200), Expect = 4.2e-12 Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 0
BLAST of PI0007562 vs. NCBI nr
Match: XP_023531633.1 (uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 79.7 bits (195), Expect = 1.6e-11 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of PI0007562 vs. NCBI nr
Match: XP_023531631.1 (uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 79.7 bits (195), Expect = 1.6e-11 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of PI0007562 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06 Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of PI0007562 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 8.2e-06 Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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