PI0007562 (gene) Melon (PI 482460) v1

Overview
NamePI0007562
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 20404765 .. 20405510 (-)
RNA-Seq ExpressionPI0007562
SyntenyPI0007562
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTAACAAAGCTATTACATTACATTCTTGTCTTCATTTGGAAATCCCATTTCTCTTTTTAGTTAACTAATCCCACACAACTCCTCAACCCTTTCAATTTGGACCTTCAAATTTCATATATTCATCCATTACTCTATTTTCAAGAACAAGAAACAGAGGAAGAATGGAGAAGATGGGAGGAGTTGGATCATGTGTGTTGAATGGAAGCTTATCAATGCAAGATTTTTTGATTGATCGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACACGATGATCGGATTAGAAACGGAGCTGCTTGTTCTCATGCTCTGAAACTCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAAAAACTTCTCTCCTAATTCTTCATTCCTCTTCTAAAGTCTCTTCTCGTCAATCTATTAACTTTGAATTTCCTCCTTCTCCTCCTTTTGTTTCCCAATTTTCAGCATCTTCATAGAATTAGTAATTGATTTTTATGTTTTTAATGTGTTTTGAGATATTCTTCCCTGTTTTTGTTCCTTTTCTTGTTGTACTCTTCAGTTGTTTGTTATGTACAAATGGGAATGGAGCTTATCTTGACAAGGAAAGGCAAACTTTTTTCTTGTTGAGAGTTTGTGCAGTTGGATTATTATTAGTGTGAAATTAATGGGTACTTGAATGGTACAGTGTTGATTTTCCAGCACATATCTATGTGTATCTTATCACGATTTCGAATTATAGCTTATGAC

mRNA sequence

CTTTAACAAAGCTATTACATTACATTCTTGTCTTCATTTGGAAATCCCATTTCTCTTTTTAGTTAACTAATCCCACACAACTCCTCAACCCTTTCAATTTGGACCTTCAAATTTCATATATTCATCCATTACTCTATTTTCAAGAACAAGAAACAGAGGAAGAATGGAGAAGATGGGAGGAGTTGGATCATGTGTGTTGAATGGAAGCTTATCAATGCAAGATTTTTTGATTGATCGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACACGATGATCGGATTAGAAACGGAGCTGCTTGTTCTCATGCTCTGAAACTCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAAAAACTTCTCTCCTAATTCTTCATTCCTCTTCTAAAGTCTCTTCTCGTCAATCTATTAACTTTGAATTTCCTCCTTCTCCTCCTTTTGTTTCCCAATTTTCAGCATCTTCATAGAATTAGTAATTGATTTTTATGTTTTTAATGTGTTTTGAGATATTCTTCCCTGTTTTTGTTCCTTTTCTTGTTGTACTCTTCAGTTGTTTGTTATGTACAAATGGGAATGGAGCTTATCTTGACAAGGAAAGGCAAACTTTTTTCTTGTTGAGAGTTTGTGCAGTTGGATTATTATTAGTGTGAAATTAATGGGTACTTGAATGGTACAGTGTTGATTTTCCAGCACATATCTATGTGTATCTTATCACGATTTCGAATTATAGCTTATGAC

Coding sequence (CDS)

ATGGAGAAGATGGGAGGAGTTGGATCATGTGTGTTGAATGGAAGCTTATCAATGCAAGATTTTTTGATTGATCGAAGGCCTTACCATCGCAATTGTGGCTGTGCATTACACGATGATCGGATTAGAAACGGAGCTGCTTGTTCTCATGCTCTGAAACTCAAAAACTCTGTTTCGTTTCTCAAAACCCAAAAATGCCCAAAAACTTCTCTCCTAATTCTTCATTCCTCTTCTAAAGTCTCTTCTCGTCAATCTATTAACTTTGAATTTCCTCCTTCTCCTCCTTTTGTTTCCCAATTTTCAGCATCTTCATAG

Protein sequence

MEKMGGVGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFLKTQKCPKTSLLILHSSSKVSSRQSINFEFPPSPPFVSQFSASS
Homology
BLAST of PI0007562 vs. ExPASy TrEMBL
Match: A0A5A7U781 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00690 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.3e-38
Identity = 87/104 (83.65%), Postives = 91/104 (87.50%), Query Frame = 0

Query: 1   MEKMGG-VGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSF 60
           MEKMGG VGSCV +GSLSMQDFLI+RRPYHRNCGCALHDDR RNGAACSHA+KLKNSVSF
Sbjct: 58  MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSF 117

Query: 61  LKTQKCPKTSLLILHSSSKVSSRQSINFEFPPSPPFVSQFSASS 104
           LKTQKCP TSL IL SSSKVSSRQ +N E   SP FVSQFS SS
Sbjct: 118 LKTQKCPITSLQILRSSSKVSSRQFVNSE---SPSFVSQFSTSS 158

BLAST of PI0007562 vs. ExPASy TrEMBL
Match: A0A0A0LZ02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265640 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.5e-34
Identity = 82/104 (78.85%), Postives = 86/104 (82.69%), Query Frame = 0

Query: 1   MEKMGGVGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFL 60
           MEKMGGVGS V +GSLS+Q FLI+RRPYHRNCGCALHDDRIRNGAACSHALK KNSVSFL
Sbjct: 1   MEKMGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFL 60

Query: 61  KTQKCPKTSLLILHSSSKVSSRQSINFEFPPSP-PFVSQFSASS 104
           KTQKCPKTSL IL S    SSRQ +N E PP P  FV QFS SS
Sbjct: 61  KTQKCPKTSLQILPS----SSRQFVNSESPPPPLHFVYQFSTSS 100

BLAST of PI0007562 vs. ExPASy TrEMBL
Match: A0A2P6RIE3 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086591 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.2e-09
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0

Query: 5  GGVGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFLKTQK 64
          G +  CV  GSLSMQD  I+RRPYH+NC CALH  +     ACS A   + ++SF K Q 
Sbjct: 8  GMIFQCVFEGSLSMQDTEIERRPYHKNCNCALHKSK---RGACSDACPQQRNISFPKKQL 67

Query: 65 CPKTSLLILHSSSKVSSRQ 84
              SL I  ++SK+SS Q
Sbjct: 68 WTDGSLCISAATSKISSSQ 83

BLAST of PI0007562 vs. ExPASy TrEMBL
Match: A0A2P6RIF2 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086581 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.1e-08
Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0

Query: 5  GGVGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFLKTQK 64
          G +  CV  GSLSMQD  I+RRPYH+NC CALH  +   G AC +A   +N +SF K Q 
Sbjct: 8  GMIFQCVFEGSLSMQDTEIERRPYHKNCNCALHKSK---GGACLNACPQRN-ISFPKKQS 67

Query: 65 CPKTSLLILHSSSKVSS 82
              SL +  ++SKVSS
Sbjct: 68 WTDGSLCMSAATSKVSS 80

BLAST of PI0007562 vs. ExPASy TrEMBL
Match: A0A1R3G2J8 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29281 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.2e-08
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0

Query: 10 CVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFLKTQKCPKTS 69
          CV  GS+ MQD LI+RRPYHRNCGCALH    +   ACS       ++SF K  K  + S
Sbjct: 12 CVFEGSIVMQDTLIERRPYHRNCGCALH----KLKGACSSTCFGTRNLSFPKKHKWNECS 71

Query: 70 LLILHSSSKVSSRQSI 86
          L +  S+SK SS+ S+
Sbjct: 72 LSVSISASKFSSQSSL 83

BLAST of PI0007562 vs. NCBI nr
Match: KAA0050036.1 (hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa] >TYK03640.1 hypothetical protein E5676_scaffold1369G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-37
Identity = 87/104 (83.65%), Postives = 91/104 (87.50%), Query Frame = 0

Query: 1   MEKMGG-VGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSF 60
           MEKMGG VGSCV +GSLSMQDFLI+RRPYHRNCGCALHDDR RNGAACSHA+KLKNSVSF
Sbjct: 58  MEKMGGVVGSCVFDGSLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSVSF 117

Query: 61  LKTQKCPKTSLLILHSSSKVSSRQSINFEFPPSPPFVSQFSASS 104
           LKTQKCP TSL IL SSSKVSSRQ +N E   SP FVSQFS SS
Sbjct: 118 LKTQKCPITSLQILRSSSKVSSRQFVNSE---SPSFVSQFSTSS 158

BLAST of PI0007562 vs. NCBI nr
Match: KGN65216.1 (hypothetical protein Csa_019753 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 1.1e-33
Identity = 82/104 (78.85%), Postives = 86/104 (82.69%), Query Frame = 0

Query: 1   MEKMGGVGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFL 60
           MEKMGGVGS V +GSLS+Q FLI+RRPYHRNCGCALHDDRIRNGAACSHALK KNSVSFL
Sbjct: 1   MEKMGGVGSRVFDGSLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSVSFL 60

Query: 61  KTQKCPKTSLLILHSSSKVSSRQSINFEFPPSP-PFVSQFSASS 104
           KTQKCPKTSL IL S    SSRQ +N E PP P  FV QFS SS
Sbjct: 61  KTQKCPKTSLQILPS----SSRQFVNSESPPPPLHFVYQFSTSS 100

BLAST of PI0007562 vs. NCBI nr
Match: KAG6587851.1 (hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 81.6 bits (200), Expect = 4.2e-12
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 0

Query: 4  MGG--VGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFLK 63
          MGG  +G CV +GS+SM+DFLI+RRPYHRNCGCALH  R++NG  C HA  L +SVSFLK
Sbjct: 1  MGGEMMGGCVFDGSISMRDFLIERRPYHRNCGCALH-HRLKNG-GCPHA--LNSSVSFLK 60

Query: 64 TQKCPKTSLLILHSSSKVSS 82
           +K   T  L + + S+ S+
Sbjct: 61 ARKWTDTCRLQIQAMSEFSA 76

BLAST of PI0007562 vs. NCBI nr
Match: XP_023531633.1 (uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.7 bits (195), Expect = 1.6e-11
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0

Query: 4  MGG--VGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFLK 63
          MGG  +G CV +GS+SM DFLI+RRPYHRNCGCALH  R +NG  C HA  L  SVSFLK
Sbjct: 1  MGGEVMGGCVFDGSISMHDFLIERRPYHRNCGCALH-HRAKNG-GCPHA--LNTSVSFLK 60

Query: 64 TQKCPKTSLLILHSSSKVSS 82
           +K   T  L + + S+ S+
Sbjct: 61 ARKWTDTCRLQIQAMSEFSA 76

BLAST of PI0007562 vs. NCBI nr
Match: XP_023531631.1 (uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.7 bits (195), Expect = 1.6e-11
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0

Query: 4  MGG--VGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFLK 63
          MGG  +G CV +GS+SM DFLI+RRPYHRNCGCALH  R +NG  C HA  L  SVSFLK
Sbjct: 1  MGGEVMGGCVFDGSISMHDFLIERRPYHRNCGCALH-HRAKNG-GCPHA--LNTSVSFLK 60

Query: 64 TQKCPKTSLLILHSSSKVSS 82
           +K   T  L + + S+ S+
Sbjct: 61 ARKWTDTCRLQIQAMSEFSA 76

BLAST of PI0007562 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 0

Query: 4  MGGVGSCVLNGSLSMQDFLIDRRPYHRNCGCALHDDRIRNGAACSHALKLKNSVSFLKTQ 63
          M G+   +  G +S  D  I RRPYH+NCGCALH +R R G + +     ++ V     Q
Sbjct: 6  MDGIFRNIFEGCISSCDSSIQRRPYHKNCGCALH-ERSRGGGSATPCRHGRSEVVMFPIQ 65

Query: 64 KC-PKTSLLILH--SSSKVSSRQSIN 87
          +   + + L LH  SSS  S+ QS++
Sbjct: 66 RSWSEGNSLALHLASSSSSSNLQSLS 90

BLAST of PI0007562 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 8.2e-06
Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = 0

Query: 6  GVGSCVLNGSLSMQDFLIDRRPYHRNCGCALHD 39
          G+   +  G +S  D  I+RRPYH+NCGCALHD
Sbjct: 5  GIFRSIFEGCISGLDSAIERRPYHKNCGCALHD 37

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U7816.3e-3883.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LZ025.5e-3478.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265640 PE=4 SV=1[more]
A0A2P6RIE36.2e-0948.10Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086591 PE=4... [more]
A0A2P6RIF23.1e-0849.35Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0086581 PE=4... [more]
A0A1R3G2J85.2e-0848.68Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29281 PE=4 ... [more]
Match NameE-valueIdentityDescription
KAA0050036.11.3e-3783.65hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa] >TYK0364... [more]
KGN65216.11.1e-3378.85hypothetical protein Csa_019753 [Cucumis sativus][more]
KAG6587851.14.2e-1256.25hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023531633.11.6e-1156.25uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023531631.11.6e-1156.25uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G35110.11.7e-0637.21unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G46490.18.2e-0654.55unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35121HOMEODOMAIN PROTEIN 8, PUTATIVE-RELATEDcoord: 9..84
NoneNo IPR availablePANTHERPTHR35121:SF8SUBFAMILY NOT NAMEDcoord: 9..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0007562.1PI0007562.1mRNA