PI0007481 (gene) Melon (PI 482460) v1

Overview
NamePI0007481
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr09: 19856887 .. 19857606 (+)
RNA-Seq ExpressionPI0007481
SyntenyPI0007481
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCCTTTCCTTGATAACTTCAAAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCACTAAAAAAGTAACAAAAAAAATTGGTAGAGAGAGAAAAATTATGGTTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGTACTCAAATTTCTTCTATTTATTTTCTAATCCTTTTTTCATGTATATTTATTATATATTCACTTCCTCATATTGTATATTTTTAATTCTGTTTTTTTTCAAGGATCAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCTATGTTACAAGTTCATCACTCAAGGTGTGATTTTCTTTTTAACTAATTAATAAAAGGGTATTTTTTAAAAAAAAATTGGAATATTTATTTAATTATTATGTTAATTGGCAGGAAATTGGTGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCACCAGCTGCTTAGTTAATTTGTAATATTTTTATGATTTATTATTTTCTGTTTTTTTCTTTTTTCTTTTTTCTTTTTTCCTTTTTTGTGTAATAAAAGACCACAGCCAATAATATATTAATTTCTGTGTGTTTTTTCATTTCTAAGATATATTATGAATATTATTTCTTTTTTCTC

mRNA sequence

TTTTCCTTTCCTTGATAACTTCAAAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCACTAAAAAAGTAACAAAAAAAATTGGTAGAGAGAGAAAAATTATGGTTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGATCAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCTATGTTACAAGTTCATCACTCAAGGAAATTGGTGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCACCAGCTGCTTAGTTAATTTGTAATATTTTTATGATTTATTATTTTCTGTTTTTTTCTTTTTTCTTTTTTCTTTTTTCCTTTTTTGTGTAATAAAAGACCACAGCCAATAATATATTAATTTCTGTGTGTTTTTTCATTTCTAAGATATATTATGAATATTATTTCTTTTTTCTC

Coding sequence (CDS)

ATGGTTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTTTCTTTCACTCATGGATCAAAAGTGGAAATGATTGAATCTTTGGGACATGGAAGCTATGTTACAAGTTCATCACTCAAGGAAATTGGTGGAAAATCAAGAAAAATGATGATTGAAATAATGGATTATGCAGATCCAGGGCCAAATACTAATACAAGAAGTGGGTATCTTAATCCTCCTCCTCCTCCACCAGCTGCTTAG

Protein sequence

MVHPKIFSTLLLSCFLLLSFTHGSKVEMIESLGHGSYVTSSSLKEIGGKSRKMMIEIMDYADPGPNTNTRSGYLNPPPPPPAA
Homology
BLAST of PI0007481 vs. ExPASy TrEMBL
Match: A0A0A0KSB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636600 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-29
Identity = 75/85 (88.24%), Postives = 76/85 (89.41%), Query Frame = 0

Query: 1  MVHPKIFST-LLLSCFLLLSFTHGSKVEMIESLGHGSYV-TSSSLKEIGGKSRKMMIEIM 60
          MVHPK+FST LLLSCFLLLSFTHG KVEMIESLGHGS V  S SLK IGGKSRKMMIEIM
Sbjct: 1  MVHPKLFSTLLLLSCFLLLSFTHGLKVEMIESLGHGSNVRISPSLKGIGGKSRKMMIEIM 60

Query: 61 DYADPGPNTNTRSGYLNPPPPPPAA 84
          DYADPGPNTNTRSGYLNPPPPP  A
Sbjct: 61 DYADPGPNTNTRSGYLNPPPPPSPA 85

BLAST of PI0007481 vs. ExPASy TrEMBL
Match: A0A5D3CUT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00160 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 7.2e-16
Identity = 48/56 (85.71%), Postives = 48/56 (85.71%), Query Frame = 0

Query: 28 MIESLGHGSYVTSSSLKEIGGKSRKMMIEIMDYADPGPNTNTRSGYLNPPPPPPAA 84
          MIESLGHGS V SSSLK IGGKSRKMMIEIMDYADPGPN NTRS    PPPPPPAA
Sbjct: 1  MIESLGHGSNVRSSSLKGIGGKSRKMMIEIMDYADPGPNNNTRSSGYLPPPPPPAA 56

BLAST of PI0007481 vs. ExPASy TrEMBL
Match: A0A498HG62 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037098 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.9e-07
Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 0

Query: 10 LLLSCFLLLSFTHGSKVEMIESLGHGSYVTSSSLKEIGGKSRKMMIEIMDYADPGPNTNT 69
          L++SC L L F+HG   +++E+  HG   +    +E  GKSRK MI +MDYADP PN N 
Sbjct: 10 LIVSCLLALCFSHGFGRKLVETAEHGEDSSVLVSRENHGKSRK-MITMMDYADPEPNVNP 69

Query: 70 RSGYLNPPPP 80
          R+GY+  PPP
Sbjct: 70 RTGYIFTPPP 78

BLAST of PI0007481 vs. ExPASy TrEMBL
Match: A0A540L840 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_031846 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0

Query: 10 LLLSCFLLLSFTHGSKVEMIESLGHGSYVTSSSLKEIGGKSRKMMIEIMDYADPGPNTNT 69
          L++SC L L F+HG   +++E+  HG   +    +E  GKSRKM   +MDYADP PN N 
Sbjct: 10 LIVSCLLALCFSHGLGRKLVETAEHGDDSSVLVSRENHGKSRKMN-TMMDYADPEPNVNP 69

Query: 70 RSGYLNPPPP 80
          R+GY+  PPP
Sbjct: 70 RTGYIFTPPP 78

BLAST of PI0007481 vs. ExPASy TrEMBL
Match: A0A540M3Y6 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_021117 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06
Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0

Query: 10 LLLSCFLLLSFTHGSKVEMIESLGHGSYVTSSSLKEIGGKSRKMMIEIMDYADPGPNTNT 69
          L++SC L L F+HG   +++E+  HG   +    +E  GKSRKM   +MDYADP PN N 
Sbjct: 10 LIVSCLLALCFSHGFGRKLVETAEHGDDSSVLVSRENHGKSRKMN-TMMDYADPEPNVNP 69

Query: 70 RSGYLNPPPP 80
          R+GY+  PPP
Sbjct: 70 RTGYIFTPPP 78

BLAST of PI0007481 vs. NCBI nr
Match: KGN52468.1 (hypothetical protein Csa_007886 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 3.1e-29
Identity = 75/85 (88.24%), Postives = 76/85 (89.41%), Query Frame = 0

Query: 1  MVHPKIFST-LLLSCFLLLSFTHGSKVEMIESLGHGSYV-TSSSLKEIGGKSRKMMIEIM 60
          MVHPK+FST LLLSCFLLLSFTHG KVEMIESLGHGS V  S SLK IGGKSRKMMIEIM
Sbjct: 1  MVHPKLFSTLLLLSCFLLLSFTHGLKVEMIESLGHGSNVRISPSLKGIGGKSRKMMIEIM 60

Query: 61 DYADPGPNTNTRSGYLNPPPPPPAA 84
          DYADPGPNTNTRSGYLNPPPPP  A
Sbjct: 61 DYADPGPNTNTRSGYLNPPPPPSPA 85

BLAST of PI0007481 vs. NCBI nr
Match: KAA0039487.1 (hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa] >TYK15242.1 hypothetical protein E5676_scaffold892G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-15
Identity = 48/56 (85.71%), Postives = 48/56 (85.71%), Query Frame = 0

Query: 28 MIESLGHGSYVTSSSLKEIGGKSRKMMIEIMDYADPGPNTNTRSGYLNPPPPPPAA 84
          MIESLGHGS V SSSLK IGGKSRKMMIEIMDYADPGPN NTRS    PPPPPPAA
Sbjct: 1  MIESLGHGSNVRSSSLKGIGGKSRKMMIEIMDYADPGPNNNTRSSGYLPPPPPPAA 56

BLAST of PI0007481 vs. NCBI nr
Match: KAG6602500.1 (hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033174.1 hypothetical protein SDJN02_07228 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 87.8 bits (216), Expect = 4.8e-14
Identity = 49/81 (60.49%), Postives = 58/81 (71.60%), Query Frame = 0

Query: 1  MVHPKIFSTLLLSCFLLLSFTHGSKVEMIESLGHGSYVTSSSLKEIGGKSRKMMIEIMDY 60
          M HPKIF  LLL  F++L F  G+    +E+  H  Y TSSS K+ GGK RK+M+E+MDY
Sbjct: 1  MDHPKIFPILLL-LFIILGFGVGA----MEAAAHPGYDTSSSQKKSGGKPRKVMMEVMDY 60

Query: 61 ADPGPNTNTRSGYLNPPPPPP 82
          ADPGPNTNTRSGYL PP  PP
Sbjct: 61 ADPGPNTNTRSGYLTPPSSPP 76

BLAST of PI0007481 vs. NCBI nr
Match: XP_023527249.1 (uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.3 bits (194), Expect = 1.7e-11
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0

Query: 4  PKIFSTLLLSCFLLLSFTHGSKVEMIESLGHGSYVTSSSLKEIGGKSRKMMIEIMDYADP 63
          PKIF  LLL  F++  F  G+    +E+  H     SSS K+ GGK RK+M+E+MDYADP
Sbjct: 2  PKIFPILLL-LFIIFGFGVGA----MEAAAHAGCDISSSQKKSGGKPRKVMMEVMDYADP 61

Query: 64 GPNTNTRSGYLNP---PPPPPAA 84
          GPNTNTRSGYL P   PPPPP++
Sbjct: 62 GPNTNTRSGYLTPPSSPPPPPSS 79

BLAST of PI0007481 vs. NCBI nr
Match: XP_023527257.1 (uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 75.1 bits (183), Expect = 3.2e-10
Identity = 46/83 (55.42%), Postives = 56/83 (67.47%), Query Frame = 0

Query: 4  PKIFSTLLLSCFLLLSFTHGSKVEMIESLGHGSYVTSSSLKEIGGKSRKMMIEIMDYADP 63
          PKIF  LLL  F++  F  G+    +E+  H     SSS K  GGK RK+M+E+MDYADP
Sbjct: 2  PKIFPILLL-LFIIFGFGVGA----MEAAAHAGCDISSSQKS-GGKPRKVMMEVMDYADP 61

Query: 64 GPNTNTRSGYLNP---PPPPPAA 84
          GPNTNTRSGYL P   PPPPP++
Sbjct: 62 GPNTNTRSGYLTPPSSPPPPPSS 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KSB71.5e-2988.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636600 PE=4 SV=1[more]
A0A5D3CUT57.2e-1685.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A498HG627.9e-0748.57Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_037098 PE=4 SV=1[more]
A0A540L8403.9e-0647.14Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_031846 PE=4 SV=1[more]
A0A540M3Y63.9e-0647.14Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_021117 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN52468.13.1e-2988.24hypothetical protein Csa_007886 [Cucumis sativus][more]
KAA0039487.11.5e-1585.71hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa] >TYK1524... [more]
KAG6602500.14.8e-1460.49hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023527249.11.7e-1155.42uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023527257.13.2e-1055.42uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..83
NoneNo IPR availablePANTHERPTHR37908TRANSMEMBRANE PROTEINcoord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0007481.1PI0007481.1mRNA