PI0007360 (gene) Melon (PI 482460) v1

Overview
NamePI0007360
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRibosomal protein L11
Locationchr05: 22790283 .. 22791186 (-)
RNA-Seq ExpressionPI0007360
SyntenyPI0007360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATATGTATAAAATATAAACCCTCTTCCCATTTACTCATTCGATTTCACAGGGAAAGGAAGTTCCGGCGAACAGCTATGGCCACCTTGAAAGAGATTCTCACCAGACGACCCGTCGCTGCCACCATTAAGCTCACCGTCCCTGCCGGTGGAGCTCGCCCTGCACCACCGGTGGGTCCAGCGCTGGGTCAATACCGGTTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCTCGGACTCAAAAGTACAAGCCTGACACACCCATGGCCGTCACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTCACTTGGTACTTGAAGAAAGCTGCCGGGATCGAATCTGGGAGCAGCCGCCCAAGCCATGTAGTCGCCTCCACGCTCACAGTCAAGCACATTTATGAGATCGCCAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCTATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTTAACGAATTGGAGTAATGCAACAGCTAAATTTCTAGGGTTTTTTTTCTCCTATTGTTCTTCAGTATCTCGATTTAAATTGAGCGTTTTTTGCAGTGACCTACATCTTCTTACTGTGAATTAATGTTATTATTCTGTATGCTAAGTCGGCTATCTAATCCTGACAGCTGACAGTTTGAGTTTCTTTAAATTCCTTAGAAATTGAACCAATTCCAGCGATTTGCTCCTGAATTTCAAAGAAAATGGGGCTAGGGTAATAGCTAGATAAAAGTTATTTTTTGTCATTAGAGTTCGCTATGGAACTATAGCCATTTTGTGAGTTGTGAACTGATTTCATTTTGATGAACCAGTTAGTAATTAACTACCTCCAATTTAATA

mRNA sequence

CATATGTATAAAATATAAACCCTCTTCCCATTTACTCATTCGATTTCACAGGGAAAGGAAGTTCCGGCGAACAGCTATGGCCACCTTGAAAGAGATTCTCACCAGACGACCCGTCGCTGCCACCATTAAGCTCACCGTCCCTGCCGGTGGAGCTCGCCCTGCACCACCGGTGGGTCCAGCGCTGGGTCAATACCGGTTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCTCGGACTCAAAAGTACAAGCCTGACACACCCATGGCCGTCACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTCACTTGGTACTTGAAGAAAGCTGCCGGGATCGAATCTGGGAGCAGCCGCCCAAGCCATGTAGTCGCCTCCACGCTCACAGTCAAGCACATTTATGAGATCGCCAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCTATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTTAACGAATTGGAGTAATGCAACAGCTAAATTTCTAGGGTTTTTTTTCTCCTATTGTTCTTCAGTATCTCGATTTAAATTGAGCGTTTTTTGCAGTGACCTACATCTTCTTACTGTGAATTAATGTTATTATTCTGTATGCTAAGTCGGCTATCTAATCCTGACAGCTGACAGTTTGAGTTTCTTTAAATTCCTTAGAAATTGAACCAATTCCAGCGATTTGCTCCTGAATTTCAAAGAAAATGGGGCTAGGGTAATAGCTAGATAAAAGTTATTTTTTGTCATTAGAGTTCGCTATGGAACTATAGCCATTTTGTGAGTTGTGAACTGATTTCATTTTGATGAACCAGTTAGTAATTAACTACCTCCAATTTAATA

Coding sequence (CDS)

ATGGCCACCTTGAAAGAGATTCTCACCAGACGACCCGTCGCTGCCACCATTAAGCTCACCGTCCCTGCCGGTGGAGCTCGCCCTGCACCACCGGTGGGTCCAGCGCTGGGTCAATACCGGTTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCTCGGACTCAAAAGTACAAGCCTGACACACCCATGGCCGTCACCATTACAGCTTTCAAGGACAACACCTTCGAGTTCACCGTCAAATCACCGTCAGTCACTTGGTACTTGAAGAAAGCTGCCGGGATCGAATCTGGGAGCAGCCGCCCAAGCCATGTAGTCGCCTCCACGCTCACAGTCAAGCACATTTATGAGATCGCCAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCTATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGGAATTAAAGTCCTTAACGAATTGGAGTAA

Protein sequence

MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Homology
[Close]
BLAST of PI0007360 vs. ExPASy Swiss-Prot
Match: Q9UTK2 (54S ribosomal protein L19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl19 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-34
Identity = 70/135 (51.85%), Postives = 91/135 (67.41%), Query Frame = 0 

Query: 17  IKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFE 76
           IKL VPAG A P PP+GPALG   L  + FCK+FNART  + P+TP+   IT     TF 
Sbjct: 9   IKLIVPAGKATPTPPIGPALGARGLKSIDFCKEFNARTAGWMPNTPVPCKITVTPQRTFT 68

Query: 77  FTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKVKQSDPYCQYMPLESIC 136
           FT+ +P  +W + K   +E GSS P H +   L++KHIYEIAK+K +DP  Q + L S+C
Sbjct: 69  FTIHTPPTSWLISKTLDLEKGSSSPLHDIKGQLSLKHIYEIAKLKSTDPSLQGIELLSLC 128

Query: 137 KSIIGTANSMGIKVL 152
           KS+IGTA SMG+KV+
Sbjct: 129 KSVIGTAKSMGVKVV 143

[Close]
BLAST of PI0007360 vs. ExPASy Swiss-Prot
Match: O67758 (50S ribosomal protein L11 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=rplK PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.4e-30
Identity = 67/140 (47.86%), Postives = 95/140 (67.86%), Query Frame = 0 

Query: 11  RPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70
           + V ATI+L +PA  A PAPPVGPALGQ+ +N+M F K FNA ++ Y+P T + V IT +
Sbjct: 3   KKVVATIELMLPAQQASPAPPVGPALGQHGVNIMEFVKQFNAASRDYEPGTILPVVITVY 62

Query: 71  KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKVKQSDPYCQYM 130
           +D +F F +K+P V++ LKKAAG+E GSS P  V    +TVK + EIAK+K  D      
Sbjct: 63  QDRSFTFIMKTPPVSYLLKKAAGVEKGSSDPKRVKVGKITVKQLEEIAKMKMKD--MNTR 122

Query: 131 PLESICKSIIGTANSMGIKV 151
            L++  +++ GTA SMGI++
Sbjct: 123 DLKAAMRTVAGTAKSMGIEI 140

[Close]
BLAST of PI0007360 vs. ExPASy Swiss-Prot
Match: Q7VRP3 (50S ribosomal protein L11 OS=Blochmannia floridanus OX=203907 GN=rplK PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.7e-29
Identity = 66/148 (44.59%), Postives = 96/148 (64.86%), Query Frame = 0 

Query: 7   ILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVT 66
           ++ ++ V + IKL + A  A P+PP+GPALGQ  +N+M FCKDFN RT  ++    + V 
Sbjct: 1   MIVKKKVQSCIKLQIEARSATPSPPIGPALGQQGINIMKFCKDFNTRTADFEMGLILPVV 60

Query: 67  ITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKVKQSDPY 126
           IT + D +F F +K+P+  + LKKAAGI+SGS +P  V    + +  IYEIAK+K  D  
Sbjct: 61  ITVYVDRSFSFVIKTPTAVFLLKKAAGIKSGSEKPKCVSVGKVLISQIYEIAKIKLID-- 120

Query: 127 CQYMPLESICKSIIGTANSMGIKVLNEL 155
              + LES  KSI+GTA S+G++V + L
Sbjct: 121 MTSLNLESASKSIMGTARSIGLEVEDNL 146

[Close]
BLAST of PI0007360 vs. ExPASy Swiss-Prot
Match: A8LLJ9 (50S ribosomal protein L11 OS=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) OX=398580 GN=rplK PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.7e-29
Identity = 65/140 (46.43%), Postives = 90/140 (64.29%), Query Frame = 0 

Query: 11  RPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70
           + +A T+KL VPAG A P+PPVGPALGQ  +N+M FCK FNA+TQ  +P  P    IT +
Sbjct: 3   KKLAGTMKLQVPAGQANPSPPVGPALGQRGINIMEFCKAFNAKTQDMEPGAPCPTVITYY 62

Query: 71  KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKVKQSDPYCQYM 130
           +D +F   +K+P   +YLKKAA ++SG+S PS     T+TV  + EIA+ K  D      
Sbjct: 63  QDKSFTMEIKTPPAAYYLKKAAKVKSGASTPSRQTVGTVTVAQVREIAEAKMRD--LNAN 122

Query: 131 PLESICKSIIGTANSMGIKV 151
            +E   K ++G+A SMGI+V
Sbjct: 123 DIEGAMKIVLGSARSMGIEV 140

[Close]
BLAST of PI0007360 vs. ExPASy Swiss-Prot
Match: Q14JT9 (50S ribosomal protein L11 OS=Francisella tularensis subsp. tularensis (strain FSC 198) OX=393115 GN=rplK PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.7e-29
Identity = 64/143 (44.76%), Postives = 95/143 (66.43%), Query Frame = 0 

Query: 8   LTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTI 67
           + ++ + A IKL V AG A P+PP+GPALGQ+ +N+M FCK+FNA+TQ  +P  P+ V I
Sbjct: 1   MAKKKIEAIIKLQVAAGKANPSPPIGPALGQHGVNIMGFCKEFNAKTQGMEPGMPIPVEI 60

Query: 68  TAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKVKQSDPYC 127
           + + D +F F +K+P  ++ +KKA  ++SGSS+PS     T+T   + EIAKVK  DP  
Sbjct: 61  SVYSDRSFTFEMKTPPASYLIKKAINVKSGSSKPSKEFVGTITRAQLEEIAKVK--DPDL 120

Query: 128 QYMPLESICKSIIGTANSMGIKV 151
               L++  + I G+A SMG+KV
Sbjct: 121 TAADLDAAVRIIAGSARSMGVKV 141

[Close]
BLAST of PI0007360 vs. ExPASy TrEMBL
Match: A0A5A7T9U7 (54S ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00710 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 0 

Query: 1   MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPV+ATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP HVVASTL+VKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

[Close]
BLAST of PI0007360 vs. ExPASy TrEMBL
Match: A0A1S3BMZ5 (54S ribosomal protein L19, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491602 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.7e-79
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 0 

Query: 1   MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPV+ATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP HVVASTL+VKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

[Close]
BLAST of PI0007360 vs. ExPASy TrEMBL
Match: A0A0A0KWT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279840 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.2e-79
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 0 

Query: 1   MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPVAATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP HVVASTL+VKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

[Close]
BLAST of PI0007360 vs. ExPASy TrEMBL
Match: A0A6J1IPM9 (54S ribosomal protein L19, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111477675 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 9.4e-78
Identity = 147/155 (94.84%), Postives = 152/155 (98.06%), Query Frame = 0 

Query: 1   MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPVAATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGS RP HVVASTLT+KHIY+IAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSGRPGHVVASTLTLKHIYDIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD 155

[Close]
BLAST of PI0007360 vs. ExPASy TrEMBL
Match: A0A6J1GG89 (54S ribosomal protein L19, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111453660 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.2e-77
Identity = 147/155 (94.84%), Postives = 152/155 (98.06%), Query Frame = 0 

Query: 1   MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPVAATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGS RP HVVASTLTVKHIY+IAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSGRPGHVVASTLTVKHIYDIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDP+CQYMPLESICKSIIGTANSMGIKV+ EL+
Sbjct: 121 KQSDPFCQYMPLESICKSIIGTANSMGIKVVKELD 155

[Close]
BLAST of PI0007360 vs. NCBI nr
Match: XP_008449842.1 (PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo] >KAA0040080.1 54S ribosomal protein L19 [Cucumis melo var. makuwa] >TYK21704.1 54S ribosomal protein L19 [Cucumis melo var. makuwa])

HSP 1 Score: 305.1 bits (780), Expect = 3.5e-79
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 0 

Query: 1   MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPV+ATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVSATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP HVVASTL+VKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

[Close]
BLAST of PI0007360 vs. NCBI nr
Match: XP_004142176.1 (54S ribosomal protein L19, mitochondrial [Cucumis sativus] >KGN54055.1 hypothetical protein Csa_018122 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 4.6e-79
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 0 

Query: 1   MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPVAATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPE 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP HVVASTL+VKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 155

[Close]
BLAST of PI0007360 vs. NCBI nr
Match: XP_038901904.1 (54S ribosomal protein L19, mitochondrial [Benincasa hispida])

HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 150/155 (96.77%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 1   MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPVAATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP HVVASTL+VKHIYEIAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKV+ ELE
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVVKELE 155

[Close]
BLAST of PI0007360 vs. NCBI nr
Match: KAG7034038.1 (mrpl19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 302.0 bits (772), Expect = 3.0e-78
Identity = 149/155 (96.13%), Postives = 153/155 (98.71%), Query Frame = 0 

Query: 1   MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPVAATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP HVVASTLTVKHIY+IAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLTVKHIYDIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD 155

[Close]
BLAST of PI0007360 vs. NCBI nr
Match: XP_022977323.1 (54S ribosomal protein L19, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 299.3 bits (765), Expect = 1.9e-77
Identity = 147/155 (94.84%), Postives = 152/155 (98.06%), Query Frame = 0 

Query: 1   MATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60
           MATLKEILTRRPVAATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD
Sbjct: 1   MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPD 60

Query: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKV 120
           TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGS RP HVVASTLT+KHIY+IAKV
Sbjct: 61  TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSGRPGHVVASTLTLKHIYDIAKV 120

Query: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           KQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Sbjct: 121 KQSDPYCQYMPLESICKSIIGTANSMGIKVVKELD 155

[Close]
BLAST of PI0007360 vs. TAIR 10
Match: AT4G35490.1 (mitochondrial ribosomal protein L11 )

HSP 1 Score: 269.2 bits (687), Expect = 2.0e-72
Identity = 128/154 (83.12%), Postives = 146/154 (94.81%), Query Frame = 0 

Query: 2   ATLKEILTRRPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDT 61
           A  KEIL RRPVAATI+LTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDT
Sbjct: 3   AAAKEIL-RRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDT 62

Query: 62  PMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKVK 121
           PMAVTITAFKDN+FEFTVKSP+V+WY+KKAAG++ GS+RP H+  +TL+V+H+YEIAKVK
Sbjct: 63  PMAVTITAFKDNSFEFTVKSPTVSWYIKKAAGVDKGSTRPGHLSVTTLSVRHVYEIAKVK 122

Query: 122 QSDPYCQYMPLESICKSIIGTANSMGIKVLNELE 156
           Q+DP+CQYMPLESICKSIIGTANSMGIK++ +LE
Sbjct: 123 QTDPFCQYMPLESICKSIIGTANSMGIKIVQDLE 155

[Close]
BLAST of PI0007360 vs. TAIR 10
Match: AT1G32990.1 (plastid ribosomal protein l11 )

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-23
Identity = 62/140 (44.29%), Postives = 80/140 (57.14%), Query Frame = 0 

Query: 11  RPVAATIKLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70
           + V   IKL + AG A PAPPVGPALG   +N+MAFCKD+NART   K    + V IT F
Sbjct: 72  KKVVGVIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTAD-KAGYIIPVEITVF 131

Query: 71  KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKVKQSDPYCQYM 130
            D +F F +K+P  +  L KAAG+E GS  P       +T+  +  IA  K  D  C   
Sbjct: 132 DDKSFTFILKTPPASVLLLKAAGVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNC--T 191

Query: 131 PLESICKSIIGTANSMGIKV 151
            +ES  + I GTA +MGI +
Sbjct: 192 TIESAMRIIAGTAANMGIDI 208

[Close]
BLAST of PI0007360 vs. TAIR 10
Match: AT5G51610.1 (Ribosomal protein L11 family protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-07
Identity = 27/79 (34.18%), Postives = 46/79 (58.23%), Query Frame = 0 

Query: 72  DNTFEFTVKSPSVTWYLKKAAGIESGSSRPSHVVASTLTVKHIYEIAKVKQSDPYCQYMP 131
           D +F F +K+P  ++ L KAAG++ GS  P  +    +T+  + +IA+VK  +  C    
Sbjct: 92  DQSFTFILKTPPTSFLLLKAAGVKKGSKDPKQIKVGMITIDQVRKIAEVKLPELNC--TT 151

Query: 132 LESICKSIIGTANSMGIKV 151
           + S  ++I GTA +MGI +
Sbjct: 152 IVSTMRTIAGTAGNMGIDI 168

The following BLAST results are available for this feature:
BLAST of PI0007360 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9UTK22.1e-3451.8554S ribosomal protein L19, mitochondrial OS=Schizosaccharomyces pombe (strain 97... [more]
O677585.4e-3047.8650S ribosomal protein L11 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=rplK PE=... [more]
Q7VRP32.7e-2944.5950S ribosomal protein L11 OS=Blochmannia floridanus OX=203907 GN=rplK PE=3 SV=1[more]
A8LLJ92.7e-2946.4350S ribosomal protein L11 OS=Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14... [more]
Q14JT92.7e-2944.7650S ribosomal protein L11 OS=Francisella tularensis subsp. tularensis (strain FS... [more]
BLAST of PI0007360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T9U71.7e-7997.4254S ribosomal protein L19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3BMZ51.7e-7997.4254S ribosomal protein L19, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103491602... [more]
A0A0A0KWT62.2e-7997.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G279840 PE=3 SV=1[more]
A0A6J1IPM99.4e-7894.8454S ribosomal protein L19, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1GG891.2e-7794.8454S ribosomal protein L19, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=L... [more]
BLAST of PI0007360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008449842.13.5e-7997.42PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo] >KAA0040080.1... [more]
XP_004142176.14.6e-7997.4254S ribosomal protein L19, mitochondrial [Cucumis sativus] >KGN54055.1 hypotheti... [more]
XP_038901904.11.8e-7896.7754S ribosomal protein L19, mitochondrial [Benincasa hispida][more]
KAG7034038.13.0e-7896.13mrpl19, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022977323.11.9e-7794.8454S ribosomal protein L19, mitochondrial-like [Cucurbita maxima][more]
BLAST of PI0007360 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G35490.12.0e-7283.12mitochondrial ribosomal protein L11 [more]
AT1G32990.11.7e-2344.29plastid ribosomal protein l11 [more]
AT5G51610.11.0e-0734.18Ribosomal protein L11 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 17..151
e-value: 1.7E-69
score: 246.9
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 1..155
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 13..152
score: 24.885878
IPR000911Ribosomal protein L11/L12CDDcd00349Ribosomal_L11coord: 17..150
e-value: 1.53873E-64
score: 191.51
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 13..75
e-value: 6.5E-25
score: 86.8
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 80..150
e-value: 3.3E-28
score: 98.0
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 78..151
e-value: 5.3E-29
score: 102.2
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 76..150
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 11..77
e-value: 4.0E-27
score: 95.7
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 13..80
IPR006519Ribosomal protein L11, bacterial-typeTIGRFAMTIGR01632TIGR01632coord: 13..150
e-value: 8.8E-56
score: 185.7
NoneNo IPR availablePANTHERPTHR11661:SF139S RIBOSOMAL PROTEIN L11, MITOCHONDRIALcoord: 1..155
IPR020785Ribosomal protein L11, conserved sitePROSITEPS00359RIBOSOMAL_L11coord: 137..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0007360.1PI0007360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0070180 large ribosomal subunit rRNA binding
molecular_function GO:0003735 structural constituent of ribosome