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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTCTATCTCAACAACCCATCAAAAGTTACAAGAAATGAAGAAAAGATTGAAATTCCAAGACATAAAACTACCGGGAGAAGGTTTTATCAACATTTCCCACCCCACCACAGACGCACATTGCCCAAGAGAAATGAGAATAAAGTTCAAAAGGAGACAAAATTGGATAACATTCCGCCAAATTGGGCATGGTAAAGCGAGACCTGAAAACGTACTTCTACAAGAGCGTTACGAACATGGGGACCATTTAACGTTGGCAGAAAGCAAGGCATTGTGGAGAGAAACAAACAAAACAATGAGAGGAGAATCAGTGAAGTCACTCACCAGGAAACAGAGAAGAGGGGAAAGGAAAGAAACCCTAGAACAGAAAGTGCATGATGGAGAAATGGGTGAGGTAATCTTGAAGCTTTACGGCCATGGAGGCCGGAGGTTGATGGGGAAGAAGATCGCCAACGGAAGCGGTTGA mRNA sequence ATGTTCTATCTCAACAACCCATCAAAAGTTACAAGAAATGAAGAAAAGATTGAAATTCCAAGACATAAAACTACCGGGAGAAGGTTTTATCAACATTTCCCACCCCACCACAGACGCACATTGCCCAAGAGAAATGAGAATAAAGTTCAAAAGGAGACAAAATTGGATAACATTCCGCCAAATTGGGCATGGAAACAGAGAAGAGGGGAAAGGAAAGAAACCCTAGAACAGAAAGTGCATGATGGAGAAATGGGTGAGGTAATCTTGAAGCTTTACGGCCATGGAGGCCGGAGGTTGATGGGGAAGAAGATCGCCAACGGAAGCGGTTGA Coding sequence (CDS) ATGTTCTATCTCAACAACCCATCAAAAGTTACAAGAAATGAAGAAAAGATTGAAATTCCAAGACATAAAACTACCGGGAGAAGGTTTTATCAACATTTCCCACCCCACCACAGACGCACATTGCCCAAGAGAAATGAGAATAAAGTTCAAAAGGAGACAAAATTGGATAACATTCCGCCAAATTGGGCATGGAAACAGAGAAGAGGGGAAAGGAAAGAAACCCTAGAACAGAAAGTGCATGATGGAGAAATGGGTGAGGTAATCTTGAAGCTTTACGGCCATGGAGGCCGGAGGTTGATGGGGAAGAAGATCGCCAACGGAAGCGGTTGA Protein sequence MFYLNNPSKVTRNEEKIEIPRHKTTGRRFYQHFPPHHRRTLPKRNENKVQKETKLDNIPPNWAWKQRRGERKETLEQKVHDGEMGEVILKLYGHGGRRLMGKKIANGSG
Homology
BLAST of PI0007215 vs. ExPASy TrEMBL
Match: A0A0A0KU78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015730 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.9e-37 Identity = 91/124 (73.39%), Postives = 95/124 (76.61%), Query Frame = 0
Query: 1 MFYLNNPSKVTRNEEKIEIPRHKTTGRRFYQHFPPHHRRTLPKRNENKVQKETKLDNIP- 60
MFYLNNPSKVTRNEEKIEIPRHKTTGRRFYQHFP H+RRTLPKRNENK++KETKLDNIP
Sbjct: 1 MFYLNNPSKVTRNEEKIEIPRHKTTGRRFYQHFPSHNRRTLPKRNENKIKKETKLDNIPF 60
Query: 61 -------------PNWAWKQRRG-----ERKETLEQKVHDGEMGEVILKLYGHGGRRLMG 106
+ KQRRG ERK TLEQKVHDGE GE ILKL G GGRRLMG
Sbjct: 61 RKIGHSKARPDNELDPKTKQRRGERKGKERKGTLEQKVHDGETGEGILKLCGRGGRRLMG 120
BLAST of PI0007215 vs. NCBI nr
Match: KGN53083.1 (hypothetical protein Csa_014843 [Cucumis sativus]) HSP 1 Score: 164.9 bits (416), Expect = 4.0e-37 Identity = 91/124 (73.39%), Postives = 95/124 (76.61%), Query Frame = 0
Query: 1 MFYLNNPSKVTRNEEKIEIPRHKTTGRRFYQHFPPHHRRTLPKRNENKVQKETKLDNIP- 60
MFYLNNPSKVTRNEEKIEIPRHKTTGRRFYQHFP H+RRTLPKRNENK++KETKLDNIP
Sbjct: 1 MFYLNNPSKVTRNEEKIEIPRHKTTGRRFYQHFPSHNRRTLPKRNENKIKKETKLDNIPF 60
Query: 61 -------------PNWAWKQRRG-----ERKETLEQKVHDGEMGEVILKLYGHGGRRLMG 106
+ KQRRG ERK TLEQKVHDGE GE ILKL G GGRRLMG
Sbjct: 61 RKIGHSKARPDNELDPKTKQRRGERKGKERKGTLEQKVHDGETGEGILKLCGRGGRRLMG 120
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KU78 | 1.9e-37 | 73.39 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G015730 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN53083.1 | 4.0e-37 | 73.39 | hypothetical protein Csa_014843 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 33..57 |
Relationships
The following mRNA feature(s) are a part of this gene:
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