PI0007094 (gene) Melon (PI 482460) v1

Overview


Name	PI0007094
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr04: 20830717 .. 20831848 (+)
RNA-Seq Expression	PI0007094
Synteny	PI0007094

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATCTTATTTACATTTGATTACTTTTCTCAACTTCCTGAACAAGAAGAAGAAAAAGATGAGGGAAAAGAATATGATGAATGTTCAATTGATGATGTACACAAGGTAATCGTAGTAATTAGCTTTTGTTTTTATTCTAGGTGATTACTATCTGATGTCCATCTTATTTACATCTGATTACTTATCTTAGCTCCCTGAACAAGGAGAAGAAAGAGATAAAGAAGTTGAAGGAGAAGATCAGGAAAACGTTGATGGATGTACAATTGATGAAATACTCAAAATTAGCAAGGTGATTTCAGTAATTAGTTCTGATTTTAATCTAAGTGATTACCATCTTATTTTCATCTAATTGCATTTGAATTATTAAATCTTTTTTTACATAGTCAACAATTTTTTATATCTATTTCCCTTAATTTGTATATAATAGCTTGTTGAAGAACTTCAACAAAAAGGAAATTGAAAAGATACAATAGTAGAAGACCATTCTAGTGTAAGTACCTAATAATAAACGCAAACTGATTTAAATTTTTTCATTAGATAATGATTATTTTGTATGTTTCGTAAACAAGATGAAGAAAACAGAAAAGAAGAAGAGAGAGAAACGAAAACAAAGAAAATGAATGACAAAGGAAAAAAAGGTAACAACATTCTGTTTTAATAAGATGTCAAATTAATAAACTTGTCAATGTTTGTTTTGATAACAACTTGGAGAAGGTGAATCTAATTACCAACAAGAAAATGACGATAAAAAGACAAAGAAAAAACATGACAAAGGAAAGAAACGGGTAACATTACTTTTTATTACCATGTGATTACTATCTGATTACTTCTATAATACCATTTTCTACTTTTTGATTACCATGTGATTACTTTCTGATTACTATTTTATACTAATTTCTAATTCATTTTATAATTGTTTTAGGTGGTTGAGAATAGAATGCAAACAAGAAAGTTTTCACAAGAAGATAAGCCTCAAGTAGAACGTGAACGACCAAGAAGAAGAGTAAAACCAACACCTAAGGCTGTTGGTTTGGAAATTGTAAATAACCACAAATTTTCAAAAAAGACACAAAATACAAGCAACACTACTTTTGATCCCCCTTCATTTAATTTGAATTTGTCACAATAA

mRNA sequence

ATGTCCATCTTATTTACATTTGATTACTTTTCTCAACTTCCTGAACAAGAAGAAGAAAAAGATGAGGGAAAAGAATATGATGAATGTTCAATTGATGATGTACACAAGCTCCCTGAACAAGGAGAAGAAAGAGATAAAGAAGTTGAAGGAGAAGATCAGGAAAACGTTGATGGATGTACAATTGATGAAATACTCAAAATTAGCAAGGTGGTTGAGAATAGAATGCAAACAAGAAAGTTTTCACAAGAAGATAAGCCTCAAGTAGAACGTGAACGACCAAGAAGAAGAGTAAAACCAACACCTAAGGCTGTTGGTTTGGAAATTGTAAATAACCACAAATTTTCAAAAAAGACACAAAATACAAGCAACACTACTTTTGATCCCCCTTCATTTAATTTGAATTTGTCACAATAA

Coding sequence (CDS)

ATGTCCATCTTATTTACATTTGATTACTTTTCTCAACTTCCTGAACAAGAAGAAGAAAAAGATGAGGGAAAAGAATATGATGAATGTTCAATTGATGATGTACACAAGCTCCCTGAACAAGGAGAAGAAAGAGATAAAGAAGTTGAAGGAGAAGATCAGGAAAACGTTGATGGATGTACAATTGATGAAATACTCAAAATTAGCAAGGTGGTTGAGAATAGAATGCAAACAAGAAAGTTTTCACAAGAAGATAAGCCTCAAGTAGAACGTGAACGACCAAGAAGAAGAGTAAAACCAACACCTAAGGCTGTTGGTTTGGAAATTGTAAATAACCACAAATTTTCAAAAAAGACACAAAATACAAGCAACACTACTTTTGATCCCCCTTCATTTAATTTGAATTTGTCACAATAA

Protein sequence

MSILFTFDYFSQLPEQEEEKDEGKEYDECSIDDVHKLPEQGEERDKEVEGEDQENVDGCTIDEILKISKVVENRMQTRKFSQEDKPQVERERPRRRVKPTPKAVGLEIVNNHKFSKKTQNTSNTTFDPPSFNLNLSQ

Homology

[Close]

BLAST of PI0007094 vs. ExPASy TrEMBL
Match: A0A5A7T6C2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00010 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.5e-05
Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = 0


Query: 15  EQEEEKD-EGKEYDECS---IDDVHKLPEQGEERDKEVEGEDQENVDGCTIDEILKISKV 74
           EQ  E++ +GKE  E S   ++D+ K+ E+          + Q+N +G T ++  K  +V
Sbjct: 318 EQPNERELDGKELMETSLKLVEDILKIREE----------KHQQNEEGRTKEKNDKGKQV 377

Query: 75  -VENRMQTRKFSQ----------EDKPQVERERPRRRVKPTPKAVGLEIVNNHKFSKKTQ 134
             +NR+ TRK SQ          +    V+ ERP+R++KPTPKA+ LE+   HK  KK +
Sbjct: 378 ATQNRVLTRKASQLAANDEKCKVQHVQHVQHERPKRKLKPTPKAIDLELAQKHKSPKKEK 437

[Close]

BLAST of PI0007094 vs. ExPASy TrEMBL
Match: A0A5D3CVR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00300 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.7e-04
Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 14  PEQEE---EKD-EGKEYDECSIDDVHKLPEQGEER--DKEVEGEDQENVDGCTIDEILKI 73
           PE E+   EKD E K+ +E S +  H    + EE+  ++E++G++        +++ILKI
Sbjct: 285 PENEDKNNEKDNEEKQMNEVSKEAHHPTIGESEEQPNERELDGKELMETSLKLVEDILKI 344

Query: 74  SK---------------------VVENRMQTRKFSQ----EDK---PQVERERPRRRVKP 133
            +                       +NR+ TRK SQ    ++K     V+ ERP+R++KP
Sbjct: 345 REEKHQQNEEGRTKGKNDKGKQVATQNRVLTRKASQLAANDEKCKVQHVQHERPKRKLKP 404

[Close]

BLAST of PI0007094 vs. ExPASy TrEMBL
Match: A0A5A7SM53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00980 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 4.7e-04
Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 14  PEQEE---EKD-EGKEYDECSIDDVHKLPEQGEER--DKEVEGEDQENVDGCTIDEILKI 73
           PE E+   EKD E K+ +E S +  H    + EE+  ++E++G++        +++ILKI
Sbjct: 304 PENEDKNNEKDNEEKQMNEVSKEAHHPTIGESEEQPNERELDGKELMETSLKLVEDILKI 363

Query: 74  SK---------------------VVENRMQTRKFSQ----EDK---PQVERERPRRRVKP 133
            +                       +NR+ TRK SQ    ++K     V+ ERP+R++KP
Sbjct: 364 REEKHQQNEEGRTKGKNDKGKQMATQNRVLTRKASQLAANDEKCKVQHVQHERPKRKLKP 423

[Close]

BLAST of PI0007094 vs. NCBI nr
Match: KAA0036929.1 (hypothetical protein E6C27_scaffold86G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-04
Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = 0


Query: 15  EQEEEKD-EGKEYDECS---IDDVHKLPEQGEERDKEVEGEDQENVDGCTIDEILKISKV 74
           EQ  E++ +GKE  E S   ++D+ K+ E+          + Q+N +G T ++  K  +V
Sbjct: 318 EQPNERELDGKELMETSLKLVEDILKIREE----------KHQQNEEGRTKEKNDKGKQV 377

Query: 75  -VENRMQTRKFSQ----------EDKPQVERERPRRRVKPTPKAVGLEIVNNHKFSKKTQ 134
             +NR+ TRK SQ          +    V+ ERP+R++KPTPKA+ LE+   HK  KK +
Sbjct: 378 ATQNRVLTRKASQLAANDEKCKVQHVQHVQHERPKRKLKPTPKAIDLELAQKHKSPKKEK 437

[Close]

BLAST of PI0007094 vs. NCBI nr
Match: KAA0032264.1 (hypothetical protein E6C27_scaffold219G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 9.6e-04
Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 14  PEQEE---EKD-EGKEYDECSIDDVHKLPEQGEER--DKEVEGEDQENVDGCTIDEILKI 73
           PE E+   EKD E K+ +E S +  H    + EE+  ++E++G++        +++ILKI
Sbjct: 304 PENEDKNNEKDNEEKQMNEVSKEAHHPTIGESEEQPNERELDGKELMETSLKLVEDILKI 363

Query: 74  SK---------------------VVENRMQTRKFSQ----EDK---PQVERERPRRRVKP 133
            +                       +NR+ TRK SQ    ++K     V+ ERP+R++KP
Sbjct: 364 REEKHQQNEEGRTKGKNDKGKQMATQNRVLTRKASQLAANDEKCKVQHVQHERPKRKLKP 423

[Close]

BLAST of PI0007094 vs. NCBI nr
Match: TYK15460.1 (hypothetical protein E5676_scaffold477G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 9.6e-04
Identity = 52/154 (33.77%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 14  PEQEE---EKD-EGKEYDECSIDDVHKLPEQGEER--DKEVEGEDQENVDGCTIDEILKI 73
           PE E+   EKD E K+ +E S +  H    + EE+  ++E++G++        +++ILKI
Sbjct: 285 PENEDKNNEKDNEEKQMNEVSKEAHHPTIGESEEQPNERELDGKELMETSLKLVEDILKI 344

Query: 74  SK---------------------VVENRMQTRKFSQ----EDK---PQVERERPRRRVKP 133
            +                       +NR+ TRK SQ    ++K     V+ ERP+R++KP
Sbjct: 345 REEKHQQNEEGRTKGKNDKGKQVATQNRVLTRKASQLAANDEKCKVQHVQHERPKRKLKP 404

The following BLAST results are available for this feature:

BLAST of PI0007094 vs.


Match Name	E-value	Identity	Description

BLAST of PI0007094 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6C2	5.5e-05	36.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CVR6	4.7e-04	33.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SM53	4.7e-04	33.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0007094 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0036929.1	1.1e-04	36.57	hypothetical protein E6C27_scaffold86G00010 [Cucumis melo var. makuwa]	[more]
KAA0032264.1	9.6e-04	33.77	hypothetical protein E6C27_scaffold219G00980 [Cucumis melo var. makuwa]	[more]
TYK15460.1	9.6e-04	33.77	hypothetical protein E5676_scaffold477G00300 [Cucumis melo var. makuwa]	[more]

BLAST of PI0007094 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007094.1	PI0007094.1	mRNA