PI0007090 (gene) Melon (PI 482460) v1

Overview
NamePI0007090
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 17303390 .. 17303578 (+)
RNA-Seq ExpressionPI0007090
SyntenyPI0007090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGCAATGGAGGTGCTCCACAGGGGCTGTTACAAAAAGGACTCAATGAGAAAGTCATGCAACGATTGGAGACCTTAATCAATGTAAGGTTAGACATACTAAAAAAAAAGTTTCAAGCTAGAGAAAGACTTGAAATAAGGAGACGAGTTGTGGGGAATCTTCAAGAGGAAGAAGACTATGGGTAA

mRNA sequence

ATGGCAGGCAATGGAGGTGCTCCACAGGGGCTGTTACAAAAAGGACTCAATGAGAAAGTCATGCAACGATTGGAGACCTTAATCAATGTAAGGTTAGACATACTAAAAAAAAAGTTTCAAGCTAGAGAAAGACTTGAAATAAGGAGACGAGTTGTGGGGAATCTTCAAGAGGAAGAAGACTATGGGTAA

Coding sequence (CDS)

ATGGCAGGCAATGGAGGTGCTCCACAGGGGCTGTTACAAAAAGGACTCAATGAGAAAGTCATGCAACGATTGGAGACCTTAATCAATGTAAGGTTAGACATACTAAAAAAAAAGTTTCAAGCTAGAGAAAGACTTGAAATAAGGAGACGAGTTGTGGGGAATCTTCAAGAGGAAGAAGACTATGGGTAA

Protein sequence

MAGNGGAPQGLLQKGLNEKVMQRLETLINVRLDILKKKFQARERLEIRRRVVGNLQEEEDYG
Homology
[Close]
BLAST of PI0007090 vs. ExPASy TrEMBL
Match: A0A5A7TC25 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00440 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.5e-13
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 1  MAGNGGAPQGLLQKGLNEKVMQRLETLINVRLDILKKKFQARERLEIRRRVVGNLQEEED 60
          MAGNGG PQG LQ G +EKVMQRLETLINV+LDIL+++FQA+ER E+RR+VVGNL  EED
Sbjct: 1  MAGNGGTPQGPLQ-GHSEKVMQRLETLINVKLDILEQRFQAKERPEVRRQVVGNLDVEED 59

[Close]
BLAST of PI0007090 vs. NCBI nr
Match: KAA0039137.1 (hypothetical protein E6C27_scaffold121G00300 [Cucumis melo var. makuwa] >TYK26975.1 hypothetical protein E5676_scaffold322G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 0 

Query: 1  MAGNGGAPQGLLQKGLNEKVMQRLETLINVRLDILKKKFQARERLEIRRRVVGNLQEEED 60
          MAGNGG PQG LQ G +EKVMQRLETLINV+LDIL+++FQA+ER E+RR+VVGNL  EED
Sbjct: 1  MAGNGGTPQGPLQ-GHSEKVMQRLETLINVKLDILEQRFQAKERPEVRRQVVGNLDVEED 59

The following BLAST results are available for this feature:
BLAST of PI0007090 vs.
Match NameE-valueIdentityDescription
BLAST of PI0007090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TC255.5e-1375.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0007090 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0039137.11.1e-1275.00hypothetical protein E6C27_scaffold121G00300 [Cucumis melo var. makuwa] >TYK2697... [more]
BLAST of PI0007090 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0007090.1PI0007090.1mRNA