PI0007082 (gene) Melon (PI 482460) v1

Overview


Name	PI0007082
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RNA demethylase ALKBH5-like
Location	chr06: 9451615 .. 9452268 (-)
RNA-Seq Expression	PI0007082
Synteny	PI0007082

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTCTTACACCATAGCTTGTTTTGTGGATTTGGGATCGAAAGAGGCTTAAGGTTGAAAGCCAAAGTCTGTACTCACTCAAGGCCGCCAAGCTTTCAACTGGAGTATGTTGAATACTGTCGGAAACTCCTCGGAATGAAGAATCCTGACAGCTTATCGGAAGGGTTTTGTGGTAAATGCCGTTTTCTTCTTCAGCAACGTCTTCGACTCCTCATTCCTACAGCTATGGACTCCTCTGGTACTTCATTAATAGCATATTTATTTGTGAAAGATGAGAACTTTGGCTCTTAGTTGTAAAGCTTTACAGGTTTGGTGCACTGATATTGTTAGTTTTCGGTCAAGCGGTCAAGTTAAAGTCCATTGAAATTTTGTCGTTTCCTTTTTTTTTTCTTTTTCTGAATCTCATTTTACTTCTCTGCAGAAAGTCACAACCACAATTCAGAAATCTATCATTCTGCAACTGAGGAGAACAAGAAGAGGAATAGGGGATTTTCTAATAATTCAGATTTAATATTGGATGATGGGATGGAAAAATTAAGATCTTCCAAAGTGAGGAAGGAGGAGTTTGTTCATTTGGAAAGGATAGATGGCAAACTGGAAAATGTTGTTCAAGGGCTAGAGCTTCCCACAGGAGTTTTTAACGACGAATAG

mRNA sequence

ATGAAATTCTTACACCATAGCTTGTTTTGTGGATTTGGGATCGAAAGAGGCTTAAGGTTGAAAGCCAAAGTCTGTACTCACTCAAGGCCGCCAAGCTTTCAACTGGAGTATGTTGAATACTGTCGGAAACTCCTCGGAATGAAGAATCCTGACAGCTTATCGGAAGGTCACAACCACAATTCAGAAATCTATCATTCTGCAACTGAGGAGAACAAGAAGAGGAATAGGGGATTTTCTAATAATTCAGATTTAATATTGGATGATGGGATGGAAAAATTAAGATCTTCCAAAGTGAGGAAGGAGGAGTTTGTTCATTTGGAAAGGATAGATGGCAAACTGGAAAATGTTGTTCAAGGGCTAGAGCTTCCCACAGGAGTTTTTAACGACGAATAG

Coding sequence (CDS)

ATGAAATTCTTACACCATAGCTTGTTTTGTGGATTTGGGATCGAAAGAGGCTTAAGGTTGAAAGCCAAAGTCTGTACTCACTCAAGGCCGCCAAGCTTTCAACTGGAGTATGTTGAATACTGTCGGAAACTCCTCGGAATGAAGAATCCTGACAGCTTATCGGAAGGTCACAACCACAATTCAGAAATCTATCATTCTGCAACTGAGGAGAACAAGAAGAGGAATAGGGGATTTTCTAATAATTCAGATTTAATATTGGATGATGGGATGGAAAAATTAAGATCTTCCAAAGTGAGGAAGGAGGAGTTTGTTCATTTGGAAAGGATAGATGGCAAACTGGAAAATGTTGTTCAAGGGCTAGAGCTTCCCACAGGAGTTTTTAACGACGAATAG

Protein sequence

MKFLHHSLFCGFGIERGLRLKAKVCTHSRPPSFQLEYVEYCRKLLGMKNPDSLSEGHNHNSEIYHSATEENKKRNRGFSNNSDLILDDGMEKLRSSKVRKEEFVHLERIDGKLENVVQGLELPTGVFNDE

Homology

[Close]

BLAST of PI0007082 vs. ExPASy TrEMBL
Match: A0A6J1D7M0 (RNA demethylase ALKBH5-like OS=Momordica charantia OX=3673 GN=LOC111017672 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 8.0e-06
Identity = 40/106 (37.74%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 44  LLGMKNPDSLSEGHNH---NSEIYHSATEENKKRNRGFS--NNSDLILDDGM-------- 103
           + G+ + D+    H H   + E    + E   KR RG    + +DL +DDG+        
Sbjct: 130 IAGVSSGDARESRHYHRHRSPERDSYSAEYGNKRMRGLPEYSGADLEVDDGIAGVSSGED 189

Query: 104 ------EKLRSSKVRKEEFVHLERIDGKLENVVQGLELPTGVFNDE 131
                 EK+R + VRK+EFVH ERIDGK+ N+++GLEL +GVF+ E
Sbjct: 190 LYEEQKEKIRFANVRKQEFVHRERIDGKVTNILEGLELHSGVFDKE 235

[Close]

BLAST of PI0007082 vs. ExPASy TrEMBL
Match: A0A2N9FSQ3 (Fe2OG dioxygenase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17666 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 48  KNPDSLSEGHNHNSEIYHSATEENKKRNRGFSNNSDLILDDGM-EKLRSSK-VRKEEFVH 107
           K  DS  E  N+     H++ E +   +   S+  D  LDD   E +R S+ VRK +FVH
Sbjct: 78  KGSDSSPESVNNR----HNSFERSDGLSSRISSRLDNGLDDEQNEHIRVSQVVRKRDFVH 137

Query: 108 LERIDGKLENVVQGLELPTGVFNDE 131
           +ERIDGK  NV+QGLEL TGVFN E
Sbjct: 138 VERIDGKKTNVLQGLELHTGVFNAE 158

[Close]

BLAST of PI0007082 vs. ExPASy TrEMBL
Match: A0A2N9HRW1 (Fe2OG dioxygenase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42597 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04
Identity = 40/85 (47.06%), Postives = 51/85 (60.00%), Query Frame = 0


Query: 48  KNPDSLSEGHNHNSEIYHSATEENKKRNRGFSNNSDLILDDGM-EKLRSSK-VRKEEFVH 107
           K  DS  E  N+     H++ E +   +   S+  D  LDD   E +R S+ VRK +FVH
Sbjct: 101 KGSDSSPESVNNR----HNSFERSDGLSSRISSRLDNGLDDEQNEHIRVSQVVRKRDFVH 160

Query: 108 LERIDGKLENVVQGLELPTGVFNDE 131
           +ERIDGK  NV+QGLEL TGVFN E
Sbjct: 161 VERIDGKKTNVLQGLELHTGVFNAE 181

[Close]

BLAST of PI0007082 vs. ExPASy TrEMBL
Match: A0A438E778 (RNA demethylase ALKBH5 OS=Vitis vinifera OX=29760 GN=Alkbh5_1 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.4e-04
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 75  NRGFSNNSDLILDDGM-----EKLRSSKV-RKEEFVHLERIDGKLENVVQGLELPTGVFN 131
           N G   NS  ++D G+     E++R S++ RK++FVH+ERIDG+  NV+QGLEL T VFN
Sbjct: 150 NDGLGGNSS-VIDTGLSEEEKEQIRLSQIGRKKDFVHIERIDGRTMNVIQGLELHTRVFN 209

[Close]

BLAST of PI0007082 vs. ExPASy TrEMBL
Match: F6H8X7 (Fe2OG dioxygenase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_12s0034g01810 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.4e-04
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 75  NRGFSNNSDLILDDGM-----EKLRSSKV-RKEEFVHLERIDGKLENVVQGLELPTGVFN 131
           N G   NS  ++D G+     E++R S++ RK++FVH+ERIDG+  NV+QGLEL T VFN
Sbjct: 129 NDGLGGNSS-VIDTGLSEEEKEQIRLSQIGRKKDFVHIERIDGRTMNVIQGLELHTRVFN 188

[Close]

BLAST of PI0007082 vs. NCBI nr
Match: KAE8650518.1 (hypothetical protein Csa_009596 [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-12
Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 37  YVEYCRKLLGMKNPDSLSEGHNHNSEIYHSATEENKKRNRGFSNNSDLILDDGMEKLRSS 96
           + EY  K LG+       E HNHNSEIYH ATEEN+KRNRGFSNNSDLILDDGMEKL+SS
Sbjct: 244 FAEYMVKDLGI-------ESHNHNSEIYHFATEENRKRNRGFSNNSDLILDDGMEKLKSS 297

Query: 97  K 98
           K
Sbjct: 304 K 297

[Close]

BLAST of PI0007082 vs. NCBI nr
Match: XP_022149186.1 (RNA demethylase ALKBH5-like [Momordica charantia])

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-05
Identity = 40/106 (37.74%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 44  LLGMKNPDSLSEGHNH---NSEIYHSATEENKKRNRGFS--NNSDLILDDGM-------- 103
           + G+ + D+    H H   + E    + E   KR RG    + +DL +DDG+        
Sbjct: 130 IAGVSSGDARESRHYHRHRSPERDSYSAEYGNKRMRGLPEYSGADLEVDDGIAGVSSGED 189

Query: 104 ------EKLRSSKVRKEEFVHLERIDGKLENVVQGLELPTGVFNDE 131
                 EK+R + VRK+EFVH ERIDGK+ N+++GLEL +GVF+ E
Sbjct: 190 LYEEQKEKIRFANVRKQEFVHRERIDGKVTNILEGLELHSGVFDKE 235

[Close]

BLAST of PI0007082 vs. NCBI nr
Match: XP_042980534.1 (RNA demethylase ALKBH9B-like [Carya illinoinensis] >KAG2705374.1 hypothetical protein I3760_05G050200 [Carya illinoinensis] >KAG6653068.1 hypothetical protein CIPAW_05G049700 [Carya illinoinensis] >KAG6711369.1 hypothetical protein I3842_05G049600 [Carya illinoinensis])

HSP 1 Score: 55.5 bits (132), Expect = 4.1e-04
Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 51  DSLSEGHNHNSEIYHSATE--ENKKRNRGFSNNSDLILDDGMEKLRSSKV-RKEEFVHLE 110
           DSL E  N+ +  Y S +E   N + +R  S   + + ++  E +R S+V RK++FV+++
Sbjct: 133 DSLRESANNKNNSYDSDSEIIANDRVSRVLSGADNGLSEEKKEHIRISQVDRKKDFVYID 192

Query: 111 RIDGKLENVVQGLELPTGVFNDE 131
           RIDGK  NV+QGLEL T VFN E
Sbjct: 193 RIDGKRTNVLQGLELHTRVFNTE 215

[Close]

BLAST of PI0007082 vs. NCBI nr
Match: KAG2705373.1 (hypothetical protein I3760_05G050200 [Carya illinoinensis] >KAG6711368.1 hypothetical protein I3842_05G049600 [Carya illinoinensis])

HSP 1 Score: 55.5 bits (132), Expect = 4.1e-04
Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 51  DSLSEGHNHNSEIYHSATE--ENKKRNRGFSNNSDLILDDGMEKLRSSKV-RKEEFVHLE 110
           DSL E  N+ +  Y S +E   N + +R  S   + + ++  E +R S+V RK++FV+++
Sbjct: 133 DSLRESANNKNNSYDSDSEIIANDRVSRVLSGADNGLSEEKKEHIRISQVDRKKDFVYID 192

Query: 111 RIDGKLENVVQGLELPTGVFNDE 131
           RIDGK  NV+QGLEL T VFN E
Sbjct: 193 RIDGKRTNVLQGLELHTRVFNTE 215

[Close]

BLAST of PI0007082 vs. NCBI nr
Match: XP_018842037.2 (RNA demethylase ALKBH9B-like isoform X1 [Juglans regia])

HSP 1 Score: 54.7 bits (130), Expect = 7.0e-04
Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 51  DSLSEGHNHNSEIYHSATEE---NKKRNRGFSNNSDLILDDGMEKLRSSKV-RKEEFVHL 110
           DSL E  N+ +  Y  +  E   N + +R  S   + + +D  E +R S+V RK++F++L
Sbjct: 137 DSLRESANNKNNSYDYSDSEIVGNDRVSRVLSGADNGLSEDKKEHIRISQVYRKKDFIYL 196

Query: 111 ERIDGKLENVVQGLELPTGVFNDE 131
           +RIDGK  NV+QGLEL T VFN E
Sbjct: 197 DRIDGKPTNVLQGLELHTRVFNAE 220

[Close]

BLAST of PI0007082 vs. TAIR 10
Match: AT2G17970.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.3e-04
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 69  EENKKRNRGFSNNS------DLILDDGMEKLRSSKV-RKEEFVHLERIDGKLENVVQGLE 128
           EE     +GF  +S        +  D  E LR   V RK++F+ LER+ GK+ NV+ GLE
Sbjct: 158 EERDSSRKGFDASSMKTPEKPKLSRDQRENLRLINVKRKKDFICLERVKGKIVNVLDGLE 217

[Close]

BLAST of PI0007082 vs. TAIR 10
Match: AT2G17970.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.3e-04
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 69  EENKKRNRGFSNNS------DLILDDGMEKLRSSKV-RKEEFVHLERIDGKLENVVQGLE 128
           EE     +GF  +S        +  D  E LR   V RK++F+ LER+ GK+ NV+ GLE
Sbjct: 84  EERDSSRKGFDASSMKTPEKPKLSRDQRENLRLINVKRKKDFICLERVKGKIVNVLDGLE 143

[Close]

BLAST of PI0007082 vs. TAIR 10
Match: AT2G17970.3 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 3.3e-04
Identity = 28/67 (41.79%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 69  EENKKRNRGFSNNS------DLILDDGMEKLRSSKV-RKEEFVHLERIDGKLENVVQGLE 128
           EE     +GF  +S        +  D  E LR   V RK++F+ LER+ GK+ NV+ GLE
Sbjct: 84  EERDSSRKGFDASSMKTPEKPKLSRDQRENLRLINVKRKKDFICLERVKGKIVNVLDGLE 143

The following BLAST results are available for this feature:

BLAST of PI0007082 vs.


Match Name	E-value	Identity	Description

BLAST of PI0007082 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7M0	8.0e-06	37.74	RNA demethylase ALKBH5-like OS=Momordica charantia OX=3673 GN=LOC111017672 PE=4 ...	[more]
A0A2N9FSQ3	2.0e-04	47.06	Fe2OG dioxygenase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_L...	[more]
A0A2N9HRW1	2.0e-04	47.06	Fe2OG dioxygenase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_L...	[more]
A0A438E778	3.4e-04	50.00	RNA demethylase ALKBH5 OS=Vitis vinifera OX=29760 GN=Alkbh5_1 PE=4 SV=1	[more]
F6H8X7	3.4e-04	50.00	Fe2OG dioxygenase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_12...	[more]

BLAST of PI0007082 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650518.1	1.8e-12	72.13	hypothetical protein Csa_009596 [Cucumis sativus]	[more]
XP_022149186.1	1.7e-05	37.74	RNA demethylase ALKBH5-like [Momordica charantia]	[more]
XP_042980534.1	4.1e-04	43.37	RNA demethylase ALKBH9B-like [Carya illinoinensis] >KAG2705374.1 hypothetical pr...	[more]
KAG2705373.1	4.1e-04	43.37	hypothetical protein I3760_05G050200 [Carya illinoinensis] >KAG6711368.1 hypothe...	[more]
XP_018842037.2	7.0e-04	42.86	RNA demethylase ALKBH9B-like isoform X1 [Juglans regia]	[more]

BLAST of PI0007082 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17970.1	3.3e-04	41.79	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT2G17970.2	3.3e-04	41.79	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT2G17970.3	3.3e-04	41.79	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007082.1	PI0007082.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process