PI0006905 (gene) Melon (PI 482460) v1

Overview
NamePI0006905
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 223667 .. 224472 (-)
RNA-Seq ExpressionPI0006905
SyntenyPI0006905
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAAGAAGAAGACGACTAAGAACATTTCTCGAAAAAGAAAAAAAAAGAAAAGAAAAGAAAAAAAAAAAAAAAAGGAAAAGAAAAACGACGCGGAAAATTGAGAGAAACAGATAAAATCGTTTCGAAATTTCTCGATCTCAAAGAAACCCGAAATCGAAACCACCGATTTTACCCGTTCTTCAATCCGGCGGAGATGGCGATTCAAAGATTAGAACTTTGTTTGGAGCTGCTGCGAATGGCTATCAATTTCGTCGTCGTCGTTGCCGAATCCGTCGGCGACGTTATCCACCGGGAATGTCAACCGCAAGCTCTGCCAACGGCTGGCGGTAGGGTTCCAGTTCCTTTCGTCGGCTTTTACCCCTAAATTCATCCTCCGCTGCCGTCCGCGGCGGCGATGTGGCGATGTTCGTTCAAAGTTAGTGTGAATTTTGTTTTTTTGTTTTTAGTAATTAAATGGAGCTATTATTGTAATTGATCTCTTGGAAATAATCCGATTATCTTCTTTTATTAGTACGAAATTATCCTCTCTCTTTATTTTTTTGGTTGGTACGAAATTATCCAATTGTTATTTGGTTGTAATTTGTTGGTTTTATCGTCATTTTGACGCCGGACCTTCTGACCAACAATAATTCAGGAACTTGAAGTCGCGCTTTAACTTAAATTACGTTCTTTGTTTTTTTTTTTTTTAAAAAAATGTATTGACTGGATGGGTGTTTGTGTAAATATTGTAGAATTTTAGGGTCTAGGTGTGAAATATAGTTATTATCCAATGGGTATGTGAAATTATAGAAGTTTATTTGTCGA

mRNA sequence

GAAGAAGAAGAAGACGACTAAGAACATTTCTCGAAAAAGAAAAAAAAAGAAAAGAAAAGAAAAAAAAAAAAAAAAGGAAAAGAAAAACGACGCGGAAAATTGAGAGAAACAGATAAAATCGTTTCGAAATTTCTCGATCTCAAAGAAACCCGAAATCGAAACCACCGATTTTACCCGTTCTTCAATCCGGCGGAGATGGCGATTCAAAGATTAGAACTTTGTTTGGAGCTGCTGCGAATGGCTATCAATTTCGTCGTCGTCGTTGCCGAATCCGTCGGCGACGTTATCCACCGGGAATGTCAACCGCAAGCTCTGCCAACGGCTGGCGGTAGGGTTCCAGTTCCTTTCGTCGGCTTTTACCCCTAAATTCATCCTCCGCTGCCGTCCGCGGCGGCGATGTGGCGATGTTCGTTCAAAGTTAGTGTGAATTTTGTTTTTTTGTTTTTAGTAATTAAATGGAGCTATTATTGTAATTGATCTCTTGGAAATAATCCGATTATCTTCTTTTATTAGTACGAAATTATCCTCTCTCTTTATTTTTTTGGTTGGTACGAAATTATCCAATTGTTATTTGGTTGTAATTTGTTGGTTTTATCGTCATTTTGACGCCGGACCTTCTGACCAACAATAATTCAGGAACTTGAAGTCGCGCTTTAACTTAAATTACGTTCTTTGTTTTTTTTTTTTTTAAAAAAATGTATTGACTGGATGGGTGTTTGTGTAAATATTGTAGAATTTTAGGGTCTAGGTGTGAAATATAGTTATTATCCAATGGGTATGTGAAATTATAGAAGTTTATTTGTCGA

Coding sequence (CDS)

ATGGCGATTCAAAGATTAGAACTTTGTTTGGAGCTGCTGCGAATGGCTATCAATTTCGTCGTCGTCGTTGCCGAATCCGTCGGCGACGTTATCCACCGGGAATGTCAACCGCAAGCTCTGCCAACGGCTGGCGGTAGGGTTCCAGTTCCTTTCGTCGGCTTTTACCCCTAA

Protein sequence

MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Homology
BLAST of PI0006905 vs. ExPASy TrEMBL
Match: A0A5D3C626 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00250 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-21
Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 57
          M IQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Sbjct: 1  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 56

BLAST of PI0006905 vs. ExPASy TrEMBL
Match: A0A0A0K3A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074910 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-21
Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 57
          M IQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Sbjct: 1  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 56

BLAST of PI0006905 vs. ExPASy TrEMBL
Match: A0A6P3ZHL2 (uncharacterized protein LOC107411246 OS=Ziziphus jujuba OX=326968 GN=LOC107411246 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-08
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 57
          M IQR+E+C+ELL+MAI FV+VVAE+VG VIH+   P  + ++    P+PF+GFYP
Sbjct: 1  MVIQRIEMCVELLKMAIEFVIVVAEAVGIVIHQNMSPAFIRSSAYPTPLPFIGFYP 56

BLAST of PI0006905 vs. ExPASy TrEMBL
Match: A0A2C9UG64 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G144200 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-06
Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 57
          M  QRLE+C++L+R+A+ FV +VAE++G VI ++   + +PT    VPVPFVGF P
Sbjct: 1  MMFQRLEMCIQLIRLALEFVFIVAEAIGIVIEQDSSHRYIPTQTFAVPVPFVGFLP 56

BLAST of PI0006905 vs. ExPASy TrEMBL
Match: A0A5D2M247 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D02G265400v1 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-05
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGG-RVPVPFVGFYP 57
          M +QRLE+C+EL+++A+ FVVVVAE+VG VIH+   P  +  +     PVP VGF P
Sbjct: 1  MVLQRLEMCVELMKLAVEFVVVVAEAVGIVIHQNHSPPVMTASRSFATPVPLVGFLP 57

BLAST of PI0006905 vs. NCBI nr
Match: KAA0031272.1 (hypothetical protein E6C27_scaffold139G00250 [Cucumis melo var. makuwa] >KGN43958.1 hypothetical protein Csa_017301 [Cucumis sativus] >TYK06724.1 hypothetical protein E5676_scaffold13G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 111.7 bits (278), Expect = 2.1e-21
Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 57
          M IQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP
Sbjct: 1  MGIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 56

BLAST of PI0006905 vs. NCBI nr
Match: XP_015874275.1 (uncharacterized protein LOC107411246 [Ziziphus jujuba])

HSP 1 Score: 68.2 bits (165), Expect = 2.6e-08
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 57
          M IQR+E+C+ELL+MAI FV+VVAE+VG VIH+   P  + ++    P+PF+GFYP
Sbjct: 1  MVIQRIEMCVELLKMAIEFVIVVAEAVGIVIHQNMSPAFIRSSAYPTPLPFIGFYP 56

BLAST of PI0006905 vs. NCBI nr
Match: OAY29431.1 (hypothetical protein MANES_15G144200v8 [Manihot esculenta])

HSP 1 Score: 61.2 bits (147), Expect = 3.2e-06
Identity = 28/56 (50.00%), Postives = 41/56 (73.21%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGGRVPVPFVGFYP 57
          M  QRLE+C++L+R+A+ FV +VAE++G VI ++   + +PT    VPVPFVGF P
Sbjct: 1  MMFQRLEMCIQLIRLALEFVFIVAEAIGIVIEQDSSHRYIPTQTFAVPVPFVGFLP 56

BLAST of PI0006905 vs. NCBI nr
Match: KAB2042822.1 (hypothetical protein ES319_D02G244200v1 [Gossypium barbadense] >KAG4160081.1 hypothetical protein ERO13_D02G211700v2 [Gossypium hirsutum] >TYG80995.1 hypothetical protein ES288_D02G261900v1 [Gossypium darwinii] >TYH85421.1 hypothetical protein ES332_D02G265400v1 [Gossypium tomentosum] >TYI95055.1 hypothetical protein E1A91_D02G250500v1 [Gossypium mustelinum])

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-05
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTAGG-RVPVPFVGFYP 57
          M +QRLE+C+EL+++A+ FVVVVAE+VG VIH+   P  +  +     PVP VGF P
Sbjct: 1  MVLQRLEMCVELMKLAVEFVVVVAEAVGIVIHQNHSPPVMTASRSFATPVPLVGFLP 57

BLAST of PI0006905 vs. NCBI nr
Match: OMP01570.1 (hypothetical protein COLO4_11728 [Corchorus olitorius])

HSP 1 Score: 57.8 bits (138), Expect = 3.6e-05
Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHR-ECQPQALPTAGGR----VPVPFVGFY 57
          M +QRLE+C+ELL++AI+FV+VVAE+VG VI + E  P  +  A GR      VPFVGF 
Sbjct: 1  MVLQRLEICVELLKLAIDFVIVVAEAVGVVIQQSERTPPMIAAASGRSISSTSVPFVGFL 60

BLAST of PI0006905 vs. TAIR 10
Match: AT3G19030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pyridoxine biosynthetic process, homoserine biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49500.1); Has 22 Blast hits to 22 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 1.7e-05
Identity = 27/61 (44.26%), Postives = 38/61 (62.30%), Query Frame = 0

Query: 1  MAIQRLELCLELLRMAINFVVVVAESVGDVIHRECQPQALPTA-GGR------VPVPFVG 55
          M  Q+LE+C+EL+++A+ FV  VAESV +   +   P +LP   GGR      VP+P VG
Sbjct: 1  MVSQKLEICIELVKIAVVFVTTVAESVEEAFRK--PPPSLPAVHGGRRNNYAAVPIPLVG 59

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C6261.0e-2198.21Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K3A11.0e-2198.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074910 PE=4 SV=1[more]
A0A6P3ZHL21.3e-0855.36uncharacterized protein LOC107411246 OS=Ziziphus jujuba OX=326968 GN=LOC10741124... [more]
A0A2C9UG641.6e-0650.00Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G144200 PE=4 SV=... [more]
A0A5D2M2471.0e-0550.88Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D02G265400v1 P... [more]
Match NameE-valueIdentityDescription
KAA0031272.12.1e-2198.21hypothetical protein E6C27_scaffold139G00250 [Cucumis melo var. makuwa] >KGN4395... [more]
XP_015874275.12.6e-0855.36uncharacterized protein LOC107411246 [Ziziphus jujuba][more]
OAY29431.13.2e-0650.00hypothetical protein MANES_15G144200v8 [Manihot esculenta][more]
KAB2042822.12.1e-0550.88hypothetical protein ES319_D02G244200v1 [Gossypium barbadense] >KAG4160081.1 hyp... [more]
OMP01570.13.6e-0554.10hypothetical protein COLO4_11728 [Corchorus olitorius][more]
Match NameE-valueIdentityDescription
AT3G19030.11.7e-0544.26unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pyridoxi... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37705BNAA08G11710D PROTEINcoord: 1..56
NoneNo IPR availablePANTHERPTHR37705:SF1BNAA08G11710D PROTEINcoord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0006905.1PI0006905.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane