Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGGGTGAGTATACACTTATACTCAGTAAGGGGGAAACTACTATCAAGCTAGGGTTGAACAGTTATCTTCCTATGGTATCCTGTAGCCATATCAATCTAGGGAATCCCAAAGGAGTTCCACAATCAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTGGTGATCCCGAAGGAAACACCCCATCAGTCTGGTGATCCAGAAGGAAACACCTATCAGTCTCGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTCGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTCGTGATCTCGAAGGAAACACCCATCAGTCTGGTGATCCAGAAGGAAACACCTATCAGTCTCGTGATCCCGAAGGAAACACCCATCAGTCTCGTGATCCCGAAGGAAACACCTATCAGTCTTGTGATCCCGAAGGAAACACCCATCAGTCTGATGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTCGTGATCCCAAAGGAAACACCTATCATGCATGCAGATATGATACCATAGCTAAAGATAACCGTTTCCCCGAATCATGCATACACATATCAATCATACAAGCCAGAATATTCATCATAAGACAGATTCCCAACAGTCATACTTGA
mRNA sequence
ATGGAAAGGCCATATCAATCTAGGGAATCCCAAAGGAGTTCCACAATCAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTGGTGATCCCGAAGGAAACACCCCATCAGTCTGGTGATCCAGAAGGAAACACCTATCAGTCTCGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTCGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTCGTGATCTCGAAGGAAACACCCATCAGTCTGGTGATCCAGAAGGAAACACCTATCAGTCTCGTGATCCCGAAGGAAACACCCATCAGTCTCGTGATCCCGAAGGAAACACCTATCAGTCTTGTGATCCCGAAGGAAACACCCATCAGTCTGATGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTCGTGATCCCAAAGGAAACACCTATCATGCATGCAGATATGATACCATAGCTAAAGATAACCGTTTCCCCGAATCATGCATACACATATCAATCATACAAGCCAGAATATTCATCATAAGACAGATTCCCAACAGTCATACTTGA
Coding sequence (CDS)
ATGGAAAGGCCATATCAATCTAGGGAATCCCAAAGGAGTTCCACAATCAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTGGTGATCCCGAAGGAAACACCCCATCAGTCTGGTGATCCAGAAGGAAACACCTATCAGTCTCGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTCGTGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCCATCAGTCTCGTGATCTCGAAGGAAACACCCATCAGTCTGGTGATCCAGAAGGAAACACCTATCAGTCTCGTGATCCCGAAGGAAACACCCATCAGTCTCGTGATCCCGAAGGAAACACCTATCAGTCTTGTGATCCCGAAGGAAACACCCATCAGTCTGATGATCCCGAAGGAAACACCCATCAGTCTGGTGATCCCGAAGGAAACACCTATCAGTCTCGTGATCCCAAAGGAAACACCTATCATGCATGCAGATATGATACCATAGCTAAAGATAACCGTTTCCCCGAATCATGCATACACATATCAATCATACAAGCCAGAATATTCATCATAAGACAGATTCCCAACAGTCATACTTGA
Protein sequence
MERPYQSRESQRSSTISLVIPKETPISLVIPKETPHQSGDPEGNTYQSRDPEGNTHQSGDPEGNTHQSRDPEGNTHQSGDPEGNTHQSRDLEGNTHQSGDPEGNTYQSRDPEGNTHQSRDPEGNTYQSCDPEGNTHQSDDPEGNTHQSGDPEGNTYQSRDPKGNTYHACRYDTIAKDNRFPESCIHISIIQARIFIIRQIPNSHT
Homology
BLAST of PI0006829 vs. ExPASy TrEMBL
Match:
A0A5D3CVH2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5393G00080 PE=4 SV=1)
HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39
Identity = 106/158 (67.09%), Postives = 121/158 (76.58%), Query Frame = 0
Query: 31 PKETPHQSGDPEGNTYQSRDPEGNTHQSGDPEGNTHQSRDPEGNTHQSGDPEGNTHQSRD 90
P+ +QS DPEG TYQSRDPEG T+QS DPEG T+QSRDPEG T+QS DPEG T+QSRD
Sbjct: 63 PEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRD 122
Query: 91 LEGNTHQSGDPEGNTYQSRDPEGNTHQSRDPEGNTYQSCDPEGNTHQSDDPEGNTHQSGD 150
EG T+QS DPEG TYQSRDPEG T+QSRDPEG TYQS DPEG T+QS DPEG T+QS D
Sbjct: 123 PEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRD 182
Query: 151 PEGNTYQSRDPKGNTYHACRYDTIAKDNRFPESCIHIS 189
PEG TYQSRDP+G TY + + +R PE C + S
Sbjct: 183 PEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQS 220
BLAST of PI0006829 vs. ExPASy TrEMBL
Match:
A0A5D3CSH9 (Foot protein 1 variant 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1779G00090 PE=4 SV=1)
HSP 1 Score: 157.1 bits (396), Expect = 7.6e-35
Identity = 99/157 (63.06%), Postives = 114/157 (72.61%), Query Frame = 0
Query: 37 QSGDPEGNTYQSRDPEGNTHQSGDPEGNTHQSRDPEGNTHQSGDPEGNTHQSRDLEGNTH 96
+S DPEG TYQSRDPEG T+QS DPEG+T+QS DPEG T+QS DPEG T QSR+ EG T+
Sbjct: 32 KSRDPEGYTYQSRDPEGCTYQSSDPEGSTYQSSDPEGCTYQSRDPEGYTLQSREPEGYTY 91
Query: 97 QSGDPEGNTYQSRDPEGNTHQSRDPEGNTYQSCDPEGNTHQSDDPEGNTHQSGDP----E 156
Q DPEG YQSRDPEG T+QS DPEG TYQS DPEG T+QS DPEG+T+QS DP E
Sbjct: 92 QFRDPEGYKYQSRDPEGCTYQSSDPEGCTYQSRDPEGCTYQSSDPEGSTYQSSDPEGCTE 151
Query: 157 GNTYQSRDPKGNTYHACRYDTIAKDNRFPESCIHISI 190
G TYQSRDPKG TY + + PE C + S+
Sbjct: 152 GYTYQSRDPKGCTYQSSIPVGYTYQSSDPEGCTYQSV 188
BLAST of PI0006829 vs. ExPASy TrEMBL
Match:
A0A5A7T025 (Mucin-3A-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001740 PE=4 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 6.7e-31
Identity = 89/135 (65.93%), Postives = 99/135 (73.33%), Query Frame = 0
Query: 32 KETPHQSGDPEGNTYQSRDPEGNTHQSGDPEGNTHQSRDPEGNTHQSGDPEGNTHQSRDL 91
K +QS DPEG TYQS DPEG T+QS DP+G +QS DPEG T+QS DPEG T+QS D
Sbjct: 16 KRCTYQSSDPEGYTYQSSDPEGCTYQSSDPKGCIYQSSDPEGCTYQSSDPEGCTYQSSDP 75
Query: 92 EGNTHQSGDPEGNTYQSRDPEGNTHQSRDPEGNTYQSCDPEGNTHQSDDPEGNTHQSGDP 151
EG T+QS DPEG YQS DPEG + S DPEG TYQS DPEG T QS DPEG T+Q DP
Sbjct: 76 EGCTYQSSDPEGCIYQSSDPEGCIYPSSDPEGCTYQSSDPEGCTDQSSDPEGCTYQYSDP 135
Query: 152 EGNTYQSRDPKGNTY 167
EG TYQS DP+G TY
Sbjct: 136 EGCTYQSSDPEGYTY 150
BLAST of PI0006829 vs. ExPASy TrEMBL
Match:
A0A5A7VQN4 (Adhesive plaque matrix protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00900 PE=4 SV=1)
HSP 1 Score: 138.7 bits (348), Expect = 2.8e-29
Identity = 98/188 (52.13%), Postives = 111/188 (59.04%), Query Frame = 0
Query: 1 MERPYQSRESQRSSTISLVIPKETPISLVIPKETPHQSGDPEGNTYQSRDPEGNTHQSGD 60
+ER YQS + T P+ P+ HQS PEG T+QS PEG THQS
Sbjct: 31 VERTYQS-SAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSA 90
Query: 61 PEGNTHQSRDPEGNTHQSGDPEGNTHQSRDLEGNTHQSGDPEGNTYQSRDPEGNTHQSRD 120
PEG THQS PEG THQS PEG THQS EG THQS PEG T+QS PEG THQS
Sbjct: 91 PEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSA 150
Query: 121 PEGNTYQSCDPEGNTHQSDDPEGNTHQSGDPEGNTYQSRDPKGNTYHACRYDTIAKDNRF 180
PEG T+QS PEG THQS PEG THQS PEG T+QS P+G T+ + + +
Sbjct: 151 PEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSA 210
Query: 181 PESCIHIS 189
PE C H S
Sbjct: 211 PEGCTHQS 217
BLAST of PI0006829 vs. ExPASy TrEMBL
Match:
A0A5D3DQV0 (Mucin-19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2736G00030 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28
Identity = 92/167 (55.09%), Postives = 104/167 (62.28%), Query Frame = 0
Query: 31 PKETPHQSGDPEGNTYQSRDPEGNTHQSGDPEGNTHQSRDPEGNTHQSGDPEGNTHQSRD 90
P+ HQS PEG T+QS PEG THQS PEG THQS PEG THQS PEG THQS
Sbjct: 2575 PEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSA 2634
Query: 91 LEGNTHQSGDPEGNTYQSRDPEGNTHQSRDPEGNTYQSCDPEGNTHQSDDPEGNTHQSGD 150
EG THQS PEG T+QS PEG THQS PEG T+QS PEG THQS PEG THQS
Sbjct: 2635 PEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSA 2694
Query: 151 PEGNTYQSRDPKGNTYHACRYDTIAKDNRFPESCIHISIIQARIFII 198
PEG T+QS P+G T+ + + + PE C H S + I+
Sbjct: 2695 PEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGVIIM 2741
BLAST of PI0006829 vs. NCBI nr
Match:
TYK15360.1 (hypothetical protein E5676_scaffold5393G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 172.6 bits (436), Expect = 3.6e-39
Identity = 106/158 (67.09%), Postives = 121/158 (76.58%), Query Frame = 0
Query: 31 PKETPHQSGDPEGNTYQSRDPEGNTHQSGDPEGNTHQSRDPEGNTHQSGDPEGNTHQSRD 90
P+ +QS DPEG TYQSRDPEG T+QS DPEG T+QSRDPEG T+QS DPEG T+QSRD
Sbjct: 63 PEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRD 122
Query: 91 LEGNTHQSGDPEGNTYQSRDPEGNTHQSRDPEGNTYQSCDPEGNTHQSDDPEGNTHQSGD 150
EG T+QS DPEG TYQSRDPEG T+QSRDPEG TYQS DPEG T+QS DPEG T+QS D
Sbjct: 123 PEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQSRD 182
Query: 151 PEGNTYQSRDPKGNTYHACRYDTIAKDNRFPESCIHIS 189
PEG TYQSRDP+G TY + + +R PE C + S
Sbjct: 183 PEGCTYQSRDPEGCTYQSRDPEGCTYQSRDPEGCTYQS 220
BLAST of PI0006829 vs. NCBI nr
Match:
TYK14897.1 (foot protein 1 variant 1-like [Cucumis melo var. makuwa])
HSP 1 Score: 157.1 bits (396), Expect = 1.6e-34
Identity = 99/157 (63.06%), Postives = 114/157 (72.61%), Query Frame = 0
Query: 37 QSGDPEGNTYQSRDPEGNTHQSGDPEGNTHQSRDPEGNTHQSGDPEGNTHQSRDLEGNTH 96
+S DPEG TYQSRDPEG T+QS DPEG+T+QS DPEG T+QS DPEG T QSR+ EG T+
Sbjct: 32 KSRDPEGYTYQSRDPEGCTYQSSDPEGSTYQSSDPEGCTYQSRDPEGYTLQSREPEGYTY 91
Query: 97 QSGDPEGNTYQSRDPEGNTHQSRDPEGNTYQSCDPEGNTHQSDDPEGNTHQSGDP----E 156
Q DPEG YQSRDPEG T+QS DPEG TYQS DPEG T+QS DPEG+T+QS DP E
Sbjct: 92 QFRDPEGYKYQSRDPEGCTYQSSDPEGCTYQSRDPEGCTYQSSDPEGSTYQSSDPEGCTE 151
Query: 157 GNTYQSRDPKGNTYHACRYDTIAKDNRFPESCIHISI 190
G TYQSRDPKG TY + + PE C + S+
Sbjct: 152 GYTYQSRDPKGCTYQSSIPVGYTYQSSDPEGCTYQSV 188
BLAST of PI0006829 vs. NCBI nr
Match:
KAA0036864.1 (mucin-3A-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 144.1 bits (362), Expect = 1.4e-30
Identity = 89/135 (65.93%), Postives = 99/135 (73.33%), Query Frame = 0
Query: 32 KETPHQSGDPEGNTYQSRDPEGNTHQSGDPEGNTHQSRDPEGNTHQSGDPEGNTHQSRDL 91
K +QS DPEG TYQS DPEG T+QS DP+G +QS DPEG T+QS DPEG T+QS D
Sbjct: 16 KRCTYQSSDPEGYTYQSSDPEGCTYQSSDPKGCIYQSSDPEGCTYQSSDPEGCTYQSSDP 75
Query: 92 EGNTHQSGDPEGNTYQSRDPEGNTHQSRDPEGNTYQSCDPEGNTHQSDDPEGNTHQSGDP 151
EG T+QS DPEG YQS DPEG + S DPEG TYQS DPEG T QS DPEG T+Q DP
Sbjct: 76 EGCTYQSSDPEGCIYQSSDPEGCIYPSSDPEGCTYQSSDPEGCTDQSSDPEGCTYQYSDP 135
Query: 152 EGNTYQSRDPKGNTY 167
EG TYQS DP+G TY
Sbjct: 136 EGCTYQSSDPEGYTY 150
BLAST of PI0006829 vs. NCBI nr
Match:
KAA0067921.1 (Adhesive plaque matrix protein [Cucumis melo var. makuwa])
HSP 1 Score: 138.7 bits (348), Expect = 5.8e-29
Identity = 98/188 (52.13%), Postives = 111/188 (59.04%), Query Frame = 0
Query: 1 MERPYQSRESQRSSTISLVIPKETPISLVIPKETPHQSGDPEGNTYQSRDPEGNTHQSGD 60
+ER YQS + T P+ P+ HQS PEG T+QS PEG THQS
Sbjct: 31 VERTYQS-SAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSA 90
Query: 61 PEGNTHQSRDPEGNTHQSGDPEGNTHQSRDLEGNTHQSGDPEGNTYQSRDPEGNTHQSRD 120
PEG THQS PEG THQS PEG THQS EG THQS PEG T+QS PEG THQS
Sbjct: 91 PEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSA 150
Query: 121 PEGNTYQSCDPEGNTHQSDDPEGNTHQSGDPEGNTYQSRDPKGNTYHACRYDTIAKDNRF 180
PEG T+QS PEG THQS PEG THQS PEG T+QS P+G T+ + + +
Sbjct: 151 PEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSA 210
Query: 181 PESCIHIS 189
PE C H S
Sbjct: 211 PEGCTHQS 217
BLAST of PI0006829 vs. NCBI nr
Match:
TYK25709.1 (mucin-19 [Cucumis melo var. makuwa])
HSP 1 Score: 136.7 bits (343), Expect = 2.2e-28
Identity = 92/167 (55.09%), Postives = 104/167 (62.28%), Query Frame = 0
Query: 31 PKETPHQSGDPEGNTYQSRDPEGNTHQSGDPEGNTHQSRDPEGNTHQSGDPEGNTHQSRD 90
P+ HQS PEG T+QS PEG THQS PEG THQS PEG THQS PEG THQS
Sbjct: 2575 PEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSA 2634
Query: 91 LEGNTHQSGDPEGNTYQSRDPEGNTHQSRDPEGNTYQSCDPEGNTHQSDDPEGNTHQSGD 150
EG THQS PEG T+QS PEG THQS PEG T+QS PEG THQS PEG THQS
Sbjct: 2635 PEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSA 2694
Query: 151 PEGNTYQSRDPKGNTYHACRYDTIAKDNRFPESCIHISIIQARIFII 198
PEG T+QS P+G T+ + + + PE C H S + I+
Sbjct: 2695 PEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGVIIM 2741
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CVH2 | 1.8e-39 | 67.09 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CSH9 | 7.6e-35 | 63.06 | Foot protein 1 variant 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
| A0A5A7T025 | 6.7e-31 | 65.93 | Mucin-3A-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
| A0A5A7VQN4 | 2.8e-29 | 52.13 | Adhesive plaque matrix protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... | [more] |
| A0A5D3DQV0 | 1.1e-28 | 55.09 | Mucin-19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2736G00030 PE=4... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK15360.1 | 3.6e-39 | 67.09 | hypothetical protein E5676_scaffold5393G00080 [Cucumis melo var. makuwa] | [more] |
| TYK14897.1 | 1.6e-34 | 63.06 | foot protein 1 variant 1-like [Cucumis melo var. makuwa] | [more] |
| KAA0036864.1 | 1.4e-30 | 65.93 | mucin-3A-like isoform X2 [Cucumis melo var. makuwa] | [more] |
| KAA0067921.1 | 5.8e-29 | 52.13 | Adhesive plaque matrix protein [Cucumis melo var. makuwa] | [more] |
| TYK25709.1 | 2.2e-28 | 55.09 | mucin-19 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
