PI0006807 (gene) Melon (PI 482460) v1

Overview


Name	PI0006807
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Zinc finger protein
Location	chr06: 1144865 .. 1145694 (+)
RNA-Seq Expression	PI0006807
Synteny	PI0006807

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCGCCGCATAATCCCCTTTCTCTTTGCTGTTCCACAAACAGAACCGGAACCGGAACCGGAATCGGAATCGGAATCGGAATCGGAATCCTCTCTCTCACCGACCGCCATGGGCTATCCCGTAGGCTACGCCGACGTGTTTTTCCCCAACGCCTTTCTCCATCTCCTCTTCTTCCTCGGTTACATTCGAAGCCTCATTGTTTCGCTCTTTCAATTTCTAGGGCTTTCCGATTTTCTCGAATCCAACGTCGTTTGGCCCGAAAATCCGACCTCGATCTTCGACAATCGATCCGTATCCACAACCCTCATCGAGGAATTCGTCCCCGTCGTTAAATTCACCGACATCGTCGCCGCCGTCGAATTTCCACCAGAATGTTGCGCCGTTTGTCTCTGTGAGTTTCAGGACGATGAGGAGGTTAGGTTTTTGAAGAATTGTAAACACATTTTTCACAAAGAATGTTTGGATCGATGGATGATTCGCGATCAGAGAAGCTGTCCTCTATGTAGAACCCTAATCGTGCCGGAGGAGTCGATTCCGCCGCTAATGGATTTTTCCGGTTGTACTGAGTTTTCCGGCGACTATAGCTAAGTTTTTTACTTTTTTTTTTCTTAATTAGAAAGAAAAAAATTGTTTCTTAATTATTTATCAACCAAAAATTGCTTTATGGTTGTGTAGATAAAATTAGATTTTGTTACCCAAGAAAATCCCATGAGTAAAATAAAATAAAATAAAATGTGAATTTCCAATATTAAAATGAAATTCCATTTAAATACAATCTTCTCTTAAGCATATTTTGTGTTTTTCAAGGAGGAAAAAAAATAATTGTG

mRNA sequence

ATGAACCGCCGCATAATCCCCTTTCTCTTTGCTGTTCCACAAACAGAACCGGAACCGGAACCGGAATCGGAATCGGAATCGGAATCGGAATCCTCTCTCTCACCGACCGCCATGGGCTATCCCGTAGGCTACGCCGACGTGTTTTTCCCCAACGCCTTTCTCCATCTCCTCTTCTTCCTCGGTTACATTCGAAGCCTCATTGTTTCGCTCTTTCAATTTCTAGGGCTTTCCGATTTTCTCGAATCCAACGTCGTTTGGCCCGAAAATCCGACCTCGATCTTCGACAATCGATCCGTATCCACAACCCTCATCGAGGAATTCGTCCCCGTCGTTAAATTCACCGACATCGTCGCCGCCGTCGAATTTCCACCAGAATGTTGCGCCGTTTGTCTCTGTGAGTTTCAGGACGATGAGGAGGTTAGGTTTTTGAAGAATTGTAAACACATTTTTCACAAAGAATGTTTGGATCGATGGATGATTCGCGATCAGAGAAGCTGTCCTCTATGTAGAACCCTAATCGTGCCGGAGGAGTCGATTCCGCCGCTAATGGATTTTTCCGGTTGTACTGAGTTTTCCGGCGACTATAGCTAAGTTTTTTACTTTTTTTTTTCTTAATTAGAAAGAAAAAAATTGTTTCTTAATTATTTATCAACCAAAAATTGCTTTATGGTTGTGTAGATAAAATTAGATTTTGTTACCCAAGAAAATCCCATGAGTAAAATAAAATAAAATAAAATGTGAATTTCCAATATTAAAATGAAATTCCATTTAAATACAATCTTCTCTTAAGCATATTTTGTGTTTTTCAAGGAGGAAAAAAAATAATTGTG

Coding sequence (CDS)

ATGAACCGCCGCATAATCCCCTTTCTCTTTGCTGTTCCACAAACAGAACCGGAACCGGAACCGGAATCGGAATCGGAATCGGAATCGGAATCCTCTCTCTCACCGACCGCCATGGGCTATCCCGTAGGCTACGCCGACGTGTTTTTCCCCAACGCCTTTCTCCATCTCCTCTTCTTCCTCGGTTACATTCGAAGCCTCATTGTTTCGCTCTTTCAATTTCTAGGGCTTTCCGATTTTCTCGAATCCAACGTCGTTTGGCCCGAAAATCCGACCTCGATCTTCGACAATCGATCCGTATCCACAACCCTCATCGAGGAATTCGTCCCCGTCGTTAAATTCACCGACATCGTCGCCGCCGTCGAATTTCCACCAGAATGTTGCGCCGTTTGTCTCTGTGAGTTTCAGGACGATGAGGAGGTTAGGTTTTTGAAGAATTGTAAACACATTTTTCACAAAGAATGTTTGGATCGATGGATGATTCGCGATCAGAGAAGCTGTCCTCTATGTAGAACCCTAATCGTGCCGGAGGAGTCGATTCCGCCGCTAATGGATTTTTCCGGTTGTACTGAGTTTTCCGGCGACTATAGCTAA

Protein sequence

MNRRIIPFLFAVPQTEPEPEPESESESESESSLSPTAMGYPVGYADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNRSVSTTLIEEFVPVVKFTDIVAAVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIPPLMDFSGCTEFSGDYS

Homology

[Close]

BLAST of PI0006807 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.7e-39
Identity = 77/144 (53.47%), Postives = 105/144 (72.92%), Query Frame = 0


Query: 38  MGYPVGYADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVVWPE---NPTSIF 97
           MG+PVGY +VF P  F+  L  LG+IR+++ S+F+FLGLSDFLE +  WP+    PT I 
Sbjct: 1   MGFPVGYTEVFLPKLFVQTLSILGFIRTIVFSIFRFLGLSDFLEMDQTWPDYTSYPTRIP 60

Query: 98  DNRS-VSTTLIEEFVPVVKFTDIVAAVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKE 157
           + RS  S  LI E +PV+KF ++  + E  PE CAVCL EF+ ++E+R+L+NC+HIFH+ 
Sbjct: 61  ETRSPFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRS 120

Query: 158 CLDRWMIRDQRSCPLCRTLIVPEE 178
           CLDRWM  DQ++CPLCRT  VP+E
Sbjct: 121 CLDRWMDHDQKTCPLCRTPFVPDE 144

[Close]

BLAST of PI0006807 vs. ExPASy Swiss-Prot
Match: Q9SUS5 (E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.6e-23
Identity = 53/145 (36.55%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 38  MGYPVGYADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNR 97
           MG P  + ++  P   L  L+ +G+ R ++ +L  ++GL  FL+ N     +PT +    
Sbjct: 1   MGLPTDFKELQIPGYVLKTLYVIGFFRDMVDALCPYIGLPSFLDHNETSRSDPTRL--AL 60

Query: 98  SVSTTLIEEFVPVVKFTDIVAAVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDR 157
           S S TL  E +PVV+F+D++     P +CC VCL +F  D+++R L  C H+FH  CLDR
Sbjct: 61  STSATLANELIPVVRFSDLLTD---PEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDR 120

Query: 158 WMIR-DQRSCPLCRTLIVPEESIPP 182
           W++  ++ +CP+CR   +PEE   P
Sbjct: 121 WIVDCNKITCPICRNRFLPEEKSTP 140

[Close]

BLAST of PI0006807 vs. ExPASy Swiss-Prot
Match: Q9SUS4 (Probable E3 ubiquitin-protein ligase RHA1A OS=Arabidopsis thaliana OX=3702 GN=RHA1A PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.1e-19
Identity = 54/159 (33.96%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 38  MGYPVGY-ADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDN 97
           MG P  +  ++  P+  L +L+ +G+ R ++ +L  ++GL  FL+ N      P      
Sbjct: 1   MGLPEDFITELQIPSYILKILYVIGFFRDIVDALCPYIGLPRFLDHNET--SAPDLTRHA 60

Query: 98  RSVSTTLIEEFVPVVKFTDIVAAVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLD 157
            S S +L  E +PVV+F+D+      P +CC VCL +F+ D++VR L  C H+FH  CLD
Sbjct: 61  LSTSASLANELIPVVRFSDLPTD---PEDCCTVCLSDFESDDKVRQLPKCGHVFHHYCLD 120

Query: 158 RWMI-RDQRSCPLCRTLIVPEESIPPLMDFSGCTEFSGD 195
           RW++  ++  CP+CR   +P+E        SG   FS +
Sbjct: 121 RWIVDYNKMKCPVCRHRFLPKEKYTQSDWGSGSDWFSDE 154

[Close]

BLAST of PI0006807 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11
Identity = 27/55 (49.09%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 127 CAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIPP 182
           C+VCL EFQD+E++R + NC H+FH +C+D W +++  +CPLCRT +  + S PP
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVW-LQNNANCPLCRTRVSCDTSFPP 191

[Close]

BLAST of PI0006807 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 3.2e-11
Identity = 52/194 (26.80%), Postives = 94/194 (48.45%), Query Frame = 0


Query: 10  FAVPQTEPEPEP---ESESESESESSLSPTAMGYPVGYADVFFPNAFLHLLFFLGYIRSL 69
           F  P + P+  P    S +  +  S +SP+ +   +  + +FF +  LHLL     +R L
Sbjct: 21  FLSPSSLPQEPPLSLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLL-----VRFL 80

Query: 70  IVSLFQFLGLSDFLESNVVWPENPTSIF--DNRSVSTTLIEEFVPVVKFTDIVAAVEFPP 129
           +    +     D+ ++          +F   +  V  + I+  +PV  +  I+    +P 
Sbjct: 81  LTPSSR--DREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDT-LPVFHYKSIIGLKNYPF 140

Query: 130 ECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESI--PPL 189
           + CAVCLCEF+ ++++R L  C H FH +C+D W++    +CPLCR+ ++ + S    P 
Sbjct: 141 D-CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLL-SHSTCPLCRSSLLSDLSSHQDPR 200

Query: 190 MDFSGCTEFSGDYS 197
             F    E + D+S
Sbjct: 201 SSFLLVLESASDHS 204

[Close]

BLAST of PI0006807 vs. ExPASy TrEMBL
Match: A0A5A7U3X1 (Zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001770 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98
Identity = 181/196 (92.35%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MNRRIIPFLFAVPQTEPEPEPESESESESESSLSPTAMGYPVGYADVFFPNAFLHLLFFL 60
           MNRRIIPFLFAVPQTEPEPEP          SLSPTAMGYPVGYADVFFPNAFLHLLFFL
Sbjct: 1   MNRRIIPFLFAVPQTEPEPEP----------SLSPTAMGYPVGYADVFFPNAFLHLLFFL 60

Query: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNRSVSTTLIEEFVPVVKFTDIVAAV 120
           GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIF +RSVST LIEEFVPVVKFTDI+AAV
Sbjct: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFHDRSVSTILIEEFVPVVKFTDIIAAV 120

Query: 121 EFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180
           EFPPECCAVCLCEF DDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP
Sbjct: 121 EFPPECCAVCLCEFHDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180

Query: 181 PLMDFSGCTEFSGDYS 197
           PLMDFSGCTEFSGDYS
Sbjct: 181 PLMDFSGCTEFSGDYS 186

[Close]

BLAST of PI0006807 vs. ExPASy TrEMBL
Match: A0A5D3D061 (Zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004810 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.1e-98
Identity = 180/196 (91.84%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MNRRIIPFLFAVPQTEPEPEPESESESESESSLSPTAMGYPVGYADVFFPNAFLHLLFFL 60
           MNRRIIPFLFAVPQTEPEPEP          SLSPTAMGYPVGYADVFFPNAFLHLLFFL
Sbjct: 1   MNRRIIPFLFAVPQTEPEPEP----------SLSPTAMGYPVGYADVFFPNAFLHLLFFL 60

Query: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNRSVSTTLIEEFVPVVKFTDIVAAV 120
           GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIF +RSVST LIEEFVPVVKFTDI+AAV
Sbjct: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFHDRSVSTILIEEFVPVVKFTDIIAAV 120

Query: 121 EFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180
           EFPPECCAVCLCEF DDEEVRFLKNCKH+FHKECLDRWMIRDQRSCPLCRTLIVPEESIP
Sbjct: 121 EFPPECCAVCLCEFHDDEEVRFLKNCKHVFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180

Query: 181 PLMDFSGCTEFSGDYS 197
           PLMDFSGCTEFSGDYS
Sbjct: 181 PLMDFSGCTEFSGDYS 186

[Close]

BLAST of PI0006807 vs. ExPASy TrEMBL
Match: A0A0A0L3J4 (Zinc finger protein OS=Cucumis sativus OX=3659 GN=Csa_3G121750 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.4e-94
Identity = 175/196 (89.29%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MNRRIIPFLFAVPQTEPEPEPESESESESESSLSPTAMGYPVGYADVFFPNAFLHLLFFL 60
           MNRRIIP LFAVPQTEPEP          ESSLSPTAMGYP+GYAD+FFPNAFLHLLFFL
Sbjct: 1   MNRRIIPLLFAVPQTEPEP----------ESSLSPTAMGYPIGYADMFFPNAFLHLLFFL 60

Query: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNRSVSTTLIEEFVPVVKFTDIVAAV 120
           GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIF +RSV T LIE+FVPVVKFTDIVAAV
Sbjct: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFYDRSVPTILIEKFVPVVKFTDIVAAV 120

Query: 121 EFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180
           EFPPECCAVCLCEFQDD+EVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP
Sbjct: 121 EFPPECCAVCLCEFQDDDEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180

Query: 181 PLMDFSGCTEFSGDYS 197
           PLMDFS CTEFSG YS
Sbjct: 181 PLMDFSDCTEFSGYYS 186

[Close]

BLAST of PI0006807 vs. ExPASy TrEMBL
Match: A0A6J1E8G9 (E3 ubiquitin-protein ligase RHA1B-like OS=Cucurbita moschata OX=3662 GN=LOC111431816 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.5e-69
Identity = 129/161 (80.12%), Postives = 141/161 (87.58%), Query Frame = 0


Query: 38  MGYPVGYADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNR 97
           MGYPVGYADVFF NAFLHLL FLGYIRSLI+SL++ LGL DFLES+VVWP+NPT I D+ 
Sbjct: 1   MGYPVGYADVFFSNAFLHLLVFLGYIRSLIISLYRILGLPDFLESSVVWPQNPTPIIDDH 60

Query: 98  SVSTTLIEEFVPVVKFTDI--VAAVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECL 157
           SV    IEEF P+VKF+DI   A   FPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECL
Sbjct: 61  SVLPIRIEEFFPMVKFSDIFDAAGAGFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECL 120

Query: 158 DRWMIRDQRSCPLCRTLIVPEESIPPLMDFSGCTEFSGDYS 197
           D WMIRDQRSCPLCRTLIVPEES+P L+DF+GC+EFSGDYS
Sbjct: 121 DGWMIRDQRSCPLCRTLIVPEESMPALVDFAGCSEFSGDYS 161

[Close]

BLAST of PI0006807 vs. ExPASy TrEMBL
Match: A0A6J1IWS3 (E3 ubiquitin-protein ligase RHA1B-like OS=Cucurbita maxima OX=3661 GN=LOC111479288 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.5e-69
Identity = 130/161 (80.75%), Postives = 140/161 (86.96%), Query Frame = 0


Query: 38  MGYPVGYADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNR 97
           MGYPVGYADVFF NAFLHLL FLGYIRSLI+SLF+ LGL DFLES+VVWP+NPT   D+ 
Sbjct: 1   MGYPVGYADVFFSNAFLHLLIFLGYIRSLIISLFRILGLPDFLESSVVWPQNPTPTIDDH 60

Query: 98  SVSTTLIEEFVPVVKFTDIVAA--VEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECL 157
           SV    IEEF PVVKF+DI  A    FPPECCAVCLCEFQ DEEVRFLKNCKHIFHKECL
Sbjct: 61  SVLPIPIEEFFPVVKFSDIFDATGAGFPPECCAVCLCEFQGDEEVRFLKNCKHIFHKECL 120

Query: 158 DRWMIRDQRSCPLCRTLIVPEESIPPLMDFSGCTEFSGDYS 197
           D WMIRDQ+SCPLCRTLIVPEESIPPL+DF+GC+EFSGDYS
Sbjct: 121 DGWMIRDQKSCPLCRTLIVPEESIPPLVDFAGCSEFSGDYS 161

[Close]

BLAST of PI0006807 vs. NCBI nr
Match: KAA0048956.1 (Zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 368.6 bits (945), Expect = 3.3e-98
Identity = 181/196 (92.35%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MNRRIIPFLFAVPQTEPEPEPESESESESESSLSPTAMGYPVGYADVFFPNAFLHLLFFL 60
           MNRRIIPFLFAVPQTEPEPEP          SLSPTAMGYPVGYADVFFPNAFLHLLFFL
Sbjct: 1   MNRRIIPFLFAVPQTEPEPEP----------SLSPTAMGYPVGYADVFFPNAFLHLLFFL 60

Query: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNRSVSTTLIEEFVPVVKFTDIVAAV 120
           GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIF +RSVST LIEEFVPVVKFTDI+AAV
Sbjct: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFHDRSVSTILIEEFVPVVKFTDIIAAV 120

Query: 121 EFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180
           EFPPECCAVCLCEF DDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP
Sbjct: 121 EFPPECCAVCLCEFHDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180

Query: 181 PLMDFSGCTEFSGDYS 197
           PLMDFSGCTEFSGDYS
Sbjct: 181 PLMDFSGCTEFSGDYS 186

[Close]

BLAST of PI0006807 vs. NCBI nr
Match: TYK17611.1 (Zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 368.2 bits (944), Expect = 4.3e-98
Identity = 180/196 (91.84%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MNRRIIPFLFAVPQTEPEPEPESESESESESSLSPTAMGYPVGYADVFFPNAFLHLLFFL 60
           MNRRIIPFLFAVPQTEPEPEP          SLSPTAMGYPVGYADVFFPNAFLHLLFFL
Sbjct: 1   MNRRIIPFLFAVPQTEPEPEP----------SLSPTAMGYPVGYADVFFPNAFLHLLFFL 60

Query: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNRSVSTTLIEEFVPVVKFTDIVAAV 120
           GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIF +RSVST LIEEFVPVVKFTDI+AAV
Sbjct: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFHDRSVSTILIEEFVPVVKFTDIIAAV 120

Query: 121 EFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180
           EFPPECCAVCLCEF DDEEVRFLKNCKH+FHKECLDRWMIRDQRSCPLCRTLIVPEESIP
Sbjct: 121 EFPPECCAVCLCEFHDDEEVRFLKNCKHVFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180

Query: 181 PLMDFSGCTEFSGDYS 197
           PLMDFSGCTEFSGDYS
Sbjct: 181 PLMDFSGCTEFSGDYS 186

[Close]

BLAST of PI0006807 vs. NCBI nr
Match: KGN56500.1 (hypothetical protein Csa_010889 [Cucumis sativus])

HSP 1 Score: 354.8 bits (909), Expect = 4.9e-94
Identity = 175/196 (89.29%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MNRRIIPFLFAVPQTEPEPEPESESESESESSLSPTAMGYPVGYADVFFPNAFLHLLFFL 60
           MNRRIIP LFAVPQTEPEP          ESSLSPTAMGYP+GYAD+FFPNAFLHLLFFL
Sbjct: 1   MNRRIIPLLFAVPQTEPEP----------ESSLSPTAMGYPIGYADMFFPNAFLHLLFFL 60

Query: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNRSVSTTLIEEFVPVVKFTDIVAAV 120
           GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIF +RSV T LIE+FVPVVKFTDIVAAV
Sbjct: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFYDRSVPTILIEKFVPVVKFTDIVAAV 120

Query: 121 EFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180
           EFPPECCAVCLCEFQDD+EVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP
Sbjct: 121 EFPPECCAVCLCEFQDDDEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEESIP 180

Query: 181 PLMDFSGCTEFSGDYS 197
           PLMDFS CTEFSG YS
Sbjct: 181 PLMDFSDCTEFSGYYS 186

[Close]

BLAST of PI0006807 vs. NCBI nr
Match: XP_023526936.1 (E3 ubiquitin-protein ligase RHA1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.6 bits (810), Expect = 1.5e-82
Identity = 157/198 (79.29%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MNRRIIPFLFAVPQTEPEPEPESESESESESSLSPTAMGYPVGYADVFFPNAFLHLLFFL 60
           MNRR+IPFLFAVPQTEP          ESESSLSPTAMGYPVGYADVFF NAFLHLL  L
Sbjct: 1   MNRRVIPFLFAVPQTEP----------ESESSLSPTAMGYPVGYADVFFSNAFLHLLVLL 60

Query: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNRSVSTTLIEEFVPVVKFTDI--VA 120
           GYIRSLI+SLF+ LGL DFLESNVVWP+NPT I D+ SV    IEEF PVVKF+DI   A
Sbjct: 61  GYIRSLIISLFRILGLPDFLESNVVWPQNPTPIIDDHSVLPIRIEEFFPVVKFSDIFDAA 120

Query: 121 AVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEES 180
              FPPECCAVCLCEF+DDEEVRFLKNCKHIFHKECLD WMIRDQRSCPLCRTLIVPE S
Sbjct: 121 GAGFPPECCAVCLCEFEDDEEVRFLKNCKHIFHKECLDGWMIRDQRSCPLCRTLIVPEGS 180

Query: 181 IPPLMDFSGCTEFSGDYS 197
           IPPL+DF+GC+EFSGDYS
Sbjct: 181 IPPLVDFAGCSEFSGDYS 188

[Close]

BLAST of PI0006807 vs. NCBI nr
Match: KAG6582623.1 (Brassinosteroid-responsive RING protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.6 bits (810), Expect = 1.5e-82
Identity = 156/198 (78.79%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MNRRIIPFLFAVPQTEPEPEPESESESESESSLSPTAMGYPVGYADVFFPNAFLHLLFFL 60
           MNRR+IPFLFAVPQT+P          ESESSLSPTAMGYPVGYADVFF NAFLHLL FL
Sbjct: 1   MNRRVIPFLFAVPQTQP----------ESESSLSPTAMGYPVGYADVFFSNAFLHLLVFL 60

Query: 61  GYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNRSVSTTLIEEFVPVVKFTDI--VA 120
           GYIRSLI+SL++ LGL DFLES+VVWP+NPT I D+ SV    IEEF P+VKF+DI   A
Sbjct: 61  GYIRSLIISLYRILGLPDFLESSVVWPQNPTPIIDDHSVLPIRIEEFFPMVKFSDIFDAA 120

Query: 121 AVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDRWMIRDQRSCPLCRTLIVPEES 180
              FPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLD WMIRDQRSCPLCRTLIVPEES
Sbjct: 121 GAGFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDGWMIRDQRSCPLCRTLIVPEES 180

Query: 181 IPPLMDFSGCTEFSGDYS 197
           IPPL+DF GC+EFSGDYS
Sbjct: 181 IPPLVDFPGCSEFSGDYS 188

[Close]

BLAST of PI0006807 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 162.5 bits (410), Expect = 3.3e-40
Identity = 77/144 (53.47%), Postives = 105/144 (72.92%), Query Frame = 0


Query: 38  MGYPVGYADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVVWPE---NPTSIF 97
           MG+PVGY +VF P  F+  L  LG+IR+++ S+F+FLGLSDFLE +  WP+    PT I 
Sbjct: 1   MGFPVGYTEVFLPKLFVQTLSILGFIRTIVFSIFRFLGLSDFLEMDQTWPDYTSYPTRIP 60

Query: 98  DNRS-VSTTLIEEFVPVVKFTDIVAAVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKE 157
           + RS  S  LI E +PV+KF ++  + E  PE CAVCL EF+ ++E+R+L+NC+HIFH+ 
Sbjct: 61  ETRSPFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRS 120

Query: 158 CLDRWMIRDQRSCPLCRTLIVPEE 178
           CLDRWM  DQ++CPLCRT  VP+E
Sbjct: 121 CLDRWMDHDQKTCPLCRTPFVPDE 144

[Close]

BLAST of PI0006807 vs. TAIR 10
Match: AT1G63840.1 (RING/U-box superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 4.4e-32
Identity = 69/143 (48.25%), Postives = 97/143 (67.83%), Query Frame = 0


Query: 38  MGYPVGYADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVV---WPENPTSIF 97
           MG+PVGY+++  P  F +LL FLG IR LI ++F+ +GL DFLE   V   WP+ P ++ 
Sbjct: 1   MGFPVGYSELLLPKIFFYLLSFLGLIRKLISTMFKIIGLPDFLEPEPVSTSWPDPPPTLT 60

Query: 98  DNRSVSTTLIEEFVPVVKFTDIVAAVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKEC 157
              S +  L  E +PVV+F+DI        ECCAVCL +F++D+E+R L NC+HIFH+ C
Sbjct: 61  KPDS-AAILAGEMLPVVRFSDINRP---ESECCAVCLYDFENDDEIRRLTNCRHIFHRGC 120

Query: 158 LDRWMI-RDQRSCPLCRTLIVPE 177
           LDRWM+  +Q +CPLCRT  +P+
Sbjct: 121 LDRWMMGYNQMTCPLCRTQFIPD 139

[Close]

BLAST of PI0006807 vs. TAIR 10
Match: AT5G41400.1 (RING/U-box superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 0


Query: 38  MGYPVGYADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVV-----WPENP-- 97
           MGYPVGY ++  P  FLHLL  LG IR+LI + F+ LGL DFLES+ V     W E P  
Sbjct: 1   MGYPVGYTELLLPRIFLHLLSLLGLIRTLIDTGFRILGLPDFLESDPVSSSSSWLEPPYM 60

Query: 98  -TSIFDNRS------VSTTLIEEFVPVVKFTDIV-AAVEFPPECCAVCLCEFQDDEEVRF 157
            T+   ++       V+  L  E +PV++F+++         +CCAVCL EF++D+E+R 
Sbjct: 61  STAAHHHQESSFFFPVAARLAGEILPVIRFSELTRPGFGSGSDCCAVCLHEFENDDEIRR 120

Query: 158 LKNCKHIFHKECLDRWMI-RDQRSCPLCRTLIVPEE 178
           L NC+HIFH+ CLDRWM+  +Q +CPLCRT  + +E
Sbjct: 121 LTNCQHIFHRSCLDRWMMGYNQMTCPLCRTPFISDE 156

[Close]

BLAST of PI0006807 vs. TAIR 10
Match: AT4G11360.1 (RING-H2 finger A1B )

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-24
Identity = 53/145 (36.55%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 38  MGYPVGYADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDNR 97
           MG P  + ++  P   L  L+ +G+ R ++ +L  ++GL  FL+ N     +PT +    
Sbjct: 1   MGLPTDFKELQIPGYVLKTLYVIGFFRDMVDALCPYIGLPSFLDHNETSRSDPTRL--AL 60

Query: 98  SVSTTLIEEFVPVVKFTDIVAAVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLDR 157
           S S TL  E +PVV+F+D++     P +CC VCL +F  D+++R L  C H+FH  CLDR
Sbjct: 61  STSATLANELIPVVRFSDLLTD---PEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDR 120

Query: 158 WMIR-DQRSCPLCRTLIVPEESIPP 182
           W++  ++ +CP+CR   +PEE   P
Sbjct: 121 WIVDCNKITCPICRNRFLPEEKSTP 140

[Close]

BLAST of PI0006807 vs. TAIR 10
Match: AT4G11370.1 (RING-H2 finger A1A )

HSP 1 Score: 96.3 bits (238), Expect = 2.9e-20
Identity = 54/159 (33.96%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 38  MGYPVGY-ADVFFPNAFLHLLFFLGYIRSLIVSLFQFLGLSDFLESNVVWPENPTSIFDN 97
           MG P  +  ++  P+  L +L+ +G+ R ++ +L  ++GL  FL+ N      P      
Sbjct: 1   MGLPEDFITELQIPSYILKILYVIGFFRDIVDALCPYIGLPRFLDHNET--SAPDLTRHA 60

Query: 98  RSVSTTLIEEFVPVVKFTDIVAAVEFPPECCAVCLCEFQDDEEVRFLKNCKHIFHKECLD 157
            S S +L  E +PVV+F+D+      P +CC VCL +F+ D++VR L  C H+FH  CLD
Sbjct: 61  LSTSASLANELIPVVRFSDLPTD---PEDCCTVCLSDFESDDKVRQLPKCGHVFHHYCLD 120

Query: 158 RWMI-RDQRSCPLCRTLIVPEESIPPLMDFSGCTEFSGD 195
           RW++  ++  CP+CR   +P+E        SG   FS +
Sbjct: 121 RWIVDYNKMKCPVCRHRFLPKEKYTQSDWGSGSDWFSDE 154

The following BLAST results are available for this feature:

BLAST of PI0006807 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF92	4.7e-39	53.47	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
Q9SUS5	3.6e-23	36.55	E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 ...	[more]
Q9SUS4	4.1e-19	33.96	Probable E3 ubiquitin-protein ligase RHA1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q9LSW9	1.9e-11	49.09	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
Q940Q4	3.2e-11	26.80	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]

BLAST of PI0006807 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U3X1	1.6e-98	92.35	Zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G...	[more]
A0A5D3D061	2.1e-98	91.84	Zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G...	[more]
A0A0A0L3J4	2.4e-94	89.29	Zinc finger protein OS=Cucumis sativus OX=3659 GN=Csa_3G121750 PE=4 SV=1	[more]
A0A6J1E8G9	3.5e-69	80.12	E3 ubiquitin-protein ligase RHA1B-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IWS3	4.5e-69	80.75	E3 ubiquitin-protein ligase RHA1B-like OS=Cucurbita maxima OX=3661 GN=LOC1114792...	[more]

BLAST of PI0006807 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048956.1	3.3e-98	92.35	Zinc finger protein [Cucumis melo var. makuwa]	[more]
TYK17611.1	4.3e-98	91.84	Zinc finger protein [Cucumis melo var. makuwa]	[more]
KGN56500.1	4.9e-94	89.29	hypothetical protein Csa_010889 [Cucumis sativus]	[more]
XP_023526936.1	1.5e-82	79.29	E3 ubiquitin-protein ligase RHA1B-like [Cucurbita pepo subsp. pepo]	[more]
KAG6582623.1	1.5e-82	78.79	Brassinosteroid-responsive RING protein 1, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of PI0006807 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61460.1	3.3e-40	53.47	brassinosteroid-responsive RING-H2	[more]
AT1G63840.1	4.4e-32	48.25	RING/U-box superfamily protein	[more]
AT5G41400.1	1.2e-29	45.51	RING/U-box superfamily protein	[more]
AT4G11360.1	2.6e-24	36.55	RING-H2 finger A1B	[more]
AT4G11370.1	2.9e-20	33.96	RING-H2 finger A1A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 127..169 e-value: 3.3E-6 score: 36.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 127..170 e-value: 2.1E-11 score: 43.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 127..170 score: 12.69582
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 92..174 e-value: 7.6E-17 score: 62.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..34
None	No IPR available	PANTHER	PTHR45969	RING ZINC FINGER PROTEIN-RELATED	coord: 38..177
None	No IPR available	PANTHER	PTHR45969:SF10	BRH1 RING FINGER PROTEIN	coord: 38..177
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 112..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006807.1	PI0006807.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity