PI0006713 (gene) Melon (PI 482460) v1

Overview
NamePI0006713
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 7642685 .. 7643173 (-)
RNA-Seq ExpressionPI0006713
SyntenyPI0006713
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCAAACGATTGAGTGCGAAACGTTGTTTCAGACGTTTCCACTCTTATCCTCCCTTACAACAACGAGGTTTAATTCTTTCGTTCAATATTTTTATTCGATGTCTACCCACACAAAAGAAACGTCGGTTGAGGCTTTGCCCACGTTTTTCTTAAGATCTGTCGATGTTTTTCTGCGTTGATAGAGACCAAAATTCTTGTAGCGTTGGTAACATAAATTTCACTATCGTCTTTCTTTGGTCAGATCTTTCGACGACGGTTTTGACGTAAAAGGCAAGAAAAGAGGCATATGATCGTCTGTATTTGATGGTAAATTATTGCAGTCTAAGTTCAGTGATGGTTTTACTTGTGTGGACAGCTTCTTTGCTTCTGTTGCCACTGGTGGTGCCACCGCTTCCTCCGCCACCGTTGGCGGTTCTCGGGCTGCCGGTTTTGATATTGGGTGTTTTGTTGTTCTTGGCTTTCTCGTCTTCTCATCGGATCCCTAA

mRNA sequence

ATGGTGCAAACGATTGAGTGCGAAACGTTGTTTCAGACGTTTCCACTCTTATCCTCCCTTACAACAACGAGGTTTAATTCTTTCTCTAAGTTCAGTGATGGTTTTACTTGTGTGGACAGCTTCTTTGCTTCTGTTGCCACTGGTGGTGCCACCGCTTCCTCCGCCACCGTTGGCGGTTCTCGGGCTGCCGGTTTTGATATTGGGTGTTTTGTTGTTCTTGGCTTTCTCGTCTTCTCATCGGATCCCTAA

Coding sequence (CDS)

ATGGTGCAAACGATTGAGTGCGAAACGTTGTTTCAGACGTTTCCACTCTTATCCTCCCTTACAACAACGAGGTTTAATTCTTTCTCTAAGTTCAGTGATGGTTTTACTTGTGTGGACAGCTTCTTTGCTTCTGTTGCCACTGGTGGTGCCACCGCTTCCTCCGCCACCGTTGGCGGTTCTCGGGCTGCCGGTTTTGATATTGGGTGTTTTGTTGTTCTTGGCTTTCTCGTCTTCTCATCGGATCCCTAA

Protein sequence

MVQTIECETLFQTFPLLSSLTTTRFNSFSKFSDGFTCVDSFFASVATGGATASSATVGGSRAAGFDIGCFVVLGFLVFSSDP
Homology
[Close]
BLAST of PI0006713 vs. ExPASy TrEMBL
Match: A0A5D3DPE0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006780 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.8e-23
Identity = 70/106 (66.04%), Postives = 71/106 (66.98%), Query Frame = 0 

Query: 1   MVQTIECETLFQTFPLLSSLTTTRFNS------------------------FSKFSDGFT 60
           MVQTIECETLFQTFPLLS LT  R +                          SKFSDGFT
Sbjct: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60

Query: 61  CVDSFFASVATGGATASSATVGGSRAAGFDIGCFVVLGFLVFSSDP 83
           CVDSFFASVATGGA ASS TVG SRAAGFDIGCFVVLGFL FSS P
Sbjct: 61  CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP 106

[Close]
BLAST of PI0006713 vs. ExPASy TrEMBL
Match: A0A0A0LBQ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821040 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.8e-23
Identity = 71/97 (73.20%), Postives = 72/97 (74.23%), Query Frame = 0 

Query: 1  MVQTIECETLFQTFPLLSSLTTTRFNSF---------------SKFSDGFTCVDSFFASV 60
          MVQTIEC TLFQTFPL S LTT R  SF               SKFSDGFT VDSFFASV
Sbjct: 1  MVQTIECGTLFQTFPLSSFLTTKR--SFDDGFDVGGKRRGIYDSKFSDGFTSVDSFFASV 60

Query: 61 ATGGATASSATVGGSRAAGFDIGCFVVLGFLVFSSDP 83
          ATGGA ASSATVG SRAAGFDIGCFVVLGFL FS+DP
Sbjct: 61 ATGGAAASSATVGDSRAAGFDIGCFVVLGFLFFSTDP 95

[Close]
BLAST of PI0006713 vs. ExPASy TrEMBL
Match: A0A1S3B754 (uncharacterized protein LOC103486890 OS=Cucumis melo OX=3656 GN=LOC103486890 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.8e-23
Identity = 70/106 (66.04%), Postives = 71/106 (66.98%), Query Frame = 0 

Query: 1   MVQTIECETLFQTFPLLSSLTTTRFNS------------------------FSKFSDGFT 60
           MVQTIECETLFQTFPLLS LT  R +                          SKFSDGFT
Sbjct: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60

Query: 61  CVDSFFASVATGGATASSATVGGSRAAGFDIGCFVVLGFLVFSSDP 83
           CVDSFFASVATGGA ASS TVG SRAAGFDIGCFVVLGFL FSS P
Sbjct: 61  CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP 106

[Close]
BLAST of PI0006713 vs. NCBI nr
Match: XP_008443266.1 (PREDICTED: uncharacterized protein LOC103486890 [Cucumis melo] >KAA0053878.1 uncharacterized protein E6C27_scaffold135G002710 [Cucumis melo var. makuwa] >TYK25526.1 uncharacterized protein E5676_scaffold352G006780 [Cucumis melo var. makuwa])

HSP 1 Score: 115.9 bits (289), Expect = 1.6e-22
Identity = 70/106 (66.04%), Postives = 71/106 (66.98%), Query Frame = 0 

Query: 1   MVQTIECETLFQTFPLLSSLTTTRFNS------------------------FSKFSDGFT 60
           MVQTIECETLFQTFPLLS LT  R +                          SKFSDGFT
Sbjct: 1   MVQTIECETLFQTFPLLSFLTIKRSSDDGFDVRDKIEKRPTTSSIFDGKLLRSKFSDGFT 60

Query: 61  CVDSFFASVATGGATASSATVGGSRAAGFDIGCFVVLGFLVFSSDP 83
           CVDSFFASVATGGA ASS TVG SRAAGFDIGCFVVLGFL FSS P
Sbjct: 61  CVDSFFASVATGGAAASSTTVGSSRAAGFDIGCFVVLGFLFFSSGP 106

[Close]
BLAST of PI0006713 vs. NCBI nr
Match: KAE8651183.1 (hypothetical protein Csa_002001, partial [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 7.5e-12
Identity = 54/78 (69.23%), Postives = 54/78 (69.23%), Query Frame = 0 

Query: 1  MVQTIECETLFQTFPLLSSLTTTRFNSF---------------SKFSDGFTCVDSFFASV 60
          MVQTIEC TLFQTFPL S LTT R  SF               SKFSDGFT VDSFFASV
Sbjct: 1  MVQTIECGTLFQTFPLSSFLTTKR--SFDDGFDVGGKRRGIYDSKFSDGFTSVDSFFASV 60

Query: 61 ATGGATASSATVGGSRAA 64
          ATGGA ASSATVG SRAA
Sbjct: 61 ATGGAAASSATVGDSRAA 76

The following BLAST results are available for this feature:
BLAST of PI0006713 vs.
Match NameE-valueIdentityDescription
BLAST of PI0006713 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DPE07.8e-2366.04Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LBQ97.8e-2373.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G821040 PE=4 SV=1[more]
A0A1S3B7547.8e-2366.04uncharacterized protein LOC103486890 OS=Cucumis melo OX=3656 GN=LOC103486890 PE=... [more]
BLAST of PI0006713 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443266.11.6e-2266.04PREDICTED: uncharacterized protein LOC103486890 [Cucumis melo] >KAA0053878.1 unc... [more]
KAE8651183.17.5e-1269.23hypothetical protein Csa_002001, partial [Cucumis sativus][more]
BLAST of PI0006713 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0006713.1PI0006713.1mRNA