PI0006706 (gene) Melon (PI 482460) v1

Overview
NamePI0006706
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionSHSP domain-containing protein
Locationchr05: 4303558 .. 4303878 (-)
RNA-Seq ExpressionPI0006706
SyntenyPI0006706
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTTCTAGAGATTGCTGGCATTGGAGGGCGCCGATGGGAATGTCACTATGAGAAGCTATATAGTAGTGGAGGTAATAGAGTGGTTATAATGCGTAGACGTCGATGGATGAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAGGAGTAGTTTTGGTTTGAAGGTATCGTTTTTAATGTTGTTGTCAAGAAGAATTAGGGAGATTGTGAATAGAATGAAGGTTGTTGAAGATGTATGCCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTTTATCTTATATATAA

mRNA sequence

ATGGGTCTTCTAGAGATTGCTGGCATTGGAGGGCGCCGATGGGAATGTCACTATGAGAAGCTATATAGTAGTGGAGGTAATAGAGTGGTTATAATGCGTAGACGTCGATGGATGAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAGGAGTAGTTTTGGTTTGAAGGTATCGTTTTTAATGTTGTTGTCAAGAAGAATTAGGGAGATTGTGAATAGAATGAAGGTTGTTGAAGATGTATGCCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTTTATCTTATATATAA

Coding sequence (CDS)

ATGGGTCTTCTAGAGATTGCTGGCATTGGAGGGCGCCGATGGGAATGTCACTATGAGAAGCTATATAGTAGTGGAGGTAATAGAGTGGTTATAATGCGTAGACGTCGATGGATGAAGAAGATGTTAAAGAGAGGAATGAAGGGTTTTCGATTGTATCGGTTTACGAGATTGAGGAGTAGTTTTGGTTTGAAGGTATCGTTTTTAATGTTGTTGTCAAGAAGAATTAGGGAGATTGTGAATAGAATGAAGGTTGTTGAAGATGTATGCCCTAATATCATCTTCTCTACTCAATGGGGACTTCCTGTTTTATCTTATATATAA

Protein sequence

MGLLEIAGIGGRRWECHYEKLYSSGGNRVVIMRRRRWMKKMLKRGMKGFRLYRFTRLRSSFGLKVSFLMLLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVLSYI
Homology
BLAST of PI0006706 vs. ExPASy TrEMBL
Match: A0A0A0LJ29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035390 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.5e-47
Identity = 97/106 (91.51%), Postives = 101/106 (95.28%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLYSSGGNRVVIMRRRRWMKKMLKRGMKGFRLYRFTRLRSS 60
           M LLEIAGIGGRRWECHYEKL S G NRVV+MRRRRW+KKMLKRGMKGFRLYRFTRL+SS
Sbjct: 1   MSLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS 60

Query: 61  FGLKVSFLMLLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVLSYI 107
           FGLKVSFLM LSRRIREIV+RMKVVEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  FGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106

BLAST of PI0006706 vs. ExPASy TrEMBL
Match: A0A5D3BCS3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00490 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.2e-46
Identity = 99/110 (90.00%), Postives = 102/110 (92.73%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLYSSGGNR----VVIMRRRRWMKKMLKRGMKGFRLYRFTR 60
           MGLLEIAGIGGRRWECHYEKL SSGG+     V+IMRRRRW+KKMLKRGMKGFRLYRFTR
Sbjct: 1   MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60

Query: 61  LRSSFGLKVSFLMLLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVLSYI 107
           LRSSFGLKVSFLM LSRRIREIVNRMK VEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110

BLAST of PI0006706 vs. ExPASy TrEMBL
Match: A0A6A4KLK9 (SHSP domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_21367 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0

Query: 4   LEIAGIGGRRWECHYEKLYSSGGNRVVIMRRRRWMKKMLKRGMKGFRLYRFTRLR-SSFG 63
           +EI+ + G RW   YEKL      +     RRRW  KM  R  +G RL R  +L   +F 
Sbjct: 128 IEISDVVGGRWRIRYEKLTGIDHEKAAARPRRRWAMKMNGR-FRGIRLPRCRKLNWRAFA 187

Query: 64  LKVSFLMLLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVLSY 106
           + +S    ++    EI+NRMK+++D+CP I+FS  WGLPVLS+
Sbjct: 188 ILMS-PKRIAEMYGEIINRMKMMDDICPGIVFSGHWGLPVLSH 228

BLAST of PI0006706 vs. ExPASy TrEMBL
Match: A0A7J7H3I9 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017039 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.3e-09
Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 0

Query: 11  GRRWECHYEKLYSSGGNRVVIMRRRRWMKKMLKRGMKGFRLYRFTRLRSSFGLKVSFLML 70
           G RW   Y++L S+   +V +  RRRW+ +M  + +KGFRL +  RL      K   +++
Sbjct: 8   GGRWTTRYKRLTSNDREKVAVRPRRRWVTRMNGK-LKGFRLPQSKRL----NWKAFSIVM 67

Query: 71  LSRRI----REIVNRMKVVEDVCPNIIFSTQWGLPVLSY 106
           L RR+     E+VNRMK  +++CP IIFS QWGLPVLS+
Sbjct: 68  LPRRMAQIYAEVVNRMK-TDEICPAIIFSGQWGLPVLSH 100

BLAST of PI0006706 vs. ExPASy TrEMBL
Match: A0A061F3B0 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026865 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.1e-08
Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 0

Query: 9   IGGRRWECHYEKLYSSGGNRVVIMRRRRWMKKMLKRGMKGFRLYRFTRLRSSFGLKVSFL 68
           +GG    C YEKL + G  R     RRRW+KKM   G+KG RL R  +L++     V F 
Sbjct: 10  LGGHPVPCRYEKLRNVGDAR----PRRRWVKKM-SGGLKGLRLSRSRKLKTL--CSVVFA 69

Query: 69  MLLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVLSY 106
             ++R   +I +R+K+   +CPNIIF+T WGLP LS+
Sbjct: 70  NRITRIYADIAHRLKMDGTLCPNIIFATHWGLPTLSH 99

BLAST of PI0006706 vs. NCBI nr
Match: KGN61039.1 (hypothetical protein Csa_021124 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 9.3e-47
Identity = 97/106 (91.51%), Postives = 101/106 (95.28%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLYSSGGNRVVIMRRRRWMKKMLKRGMKGFRLYRFTRLRSS 60
           M LLEIAGIGGRRWECHYEKL S G NRVV+MRRRRW+KKMLKRGMKGFRLYRFTRL+SS
Sbjct: 1   MSLLEIAGIGGRRWECHYEKLNSGGSNRVVVMRRRRWVKKMLKRGMKGFRLYRFTRLKSS 60

Query: 61  FGLKVSFLMLLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVLSYI 107
           FGLKVSFLM LSRRIREIV+RMKVVEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  FGLKVSFLMSLSRRIREIVSRMKVVEDVCPNIIFSTQWGLPVLSYI 106

BLAST of PI0006706 vs. NCBI nr
Match: KAA0056096.1 (hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa] >TYJ96421.1 hypothetical protein E5676_scaffold546G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 194.5 bits (493), Expect = 4.6e-46
Identity = 99/110 (90.00%), Postives = 102/110 (92.73%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLYSSGGNR----VVIMRRRRWMKKMLKRGMKGFRLYRFTR 60
           MGLLEIAGIGGRRWECHYEKL SSGG+     V+IMRRRRW+KKMLKRGMKGFRLYRFTR
Sbjct: 1   MGLLEIAGIGGRRWECHYEKLNSSGGSNNRVVVIIMRRRRWIKKMLKRGMKGFRLYRFTR 60

Query: 61  LRSSFGLKVSFLMLLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVLSYI 107
           LRSSFGLKVSFLM LSRRIREIVNRMK VEDVCPNIIFSTQWGLPVLSYI
Sbjct: 61  LRSSFGLKVSFLMSLSRRIREIVNRMKFVEDVCPNIIFSTQWGLPVLSYI 110

BLAST of PI0006706 vs. NCBI nr
Match: KAG6599155.1 (Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.0 bits (341), Expect = 1.9e-28
Identity = 77/105 (73.33%), Postives = 83/105 (79.05%), Query Frame = 0

Query: 1   MGLLEIAGIGGRRWECHYEKLYSSGGNRVVIMRRRRWMKKMLKRGMKGFRLYRFTRLRSS 60
           MGLLE AGIGGRRW   YEKL+    +  V+  RRRWMKK LKRG KGFRLYR TR R S
Sbjct: 452 MGLLETAGIGGRRWN-QYEKLHCEDND--VVKCRRRWMKKTLKRGKKGFRLYRLTRSR-S 511

Query: 61  FGLKVSFLMLLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVLSY 106
           F LKVSFL+L+SRRIREIVNRMK VEDVC N+IF TQWGLP LSY
Sbjct: 512 FCLKVSFLVLMSRRIREIVNRMK-VEDVCANVIFFTQWGLPTLSY 551

BLAST of PI0006706 vs. NCBI nr
Match: KAE9446725.1 (hypothetical protein C3L33_21367, partial [Rhododendron williamsianum])

HSP 1 Score: 72.0 bits (175), Expect = 3.4e-09
Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0

Query: 4   LEIAGIGGRRWECHYEKLYSSGGNRVVIMRRRRWMKKMLKRGMKGFRLYRFTRLR-SSFG 63
           +EI+ + G RW   YEKL      +     RRRW  KM  R  +G RL R  +L   +F 
Sbjct: 128 IEISDVVGGRWRIRYEKLTGIDHEKAAARPRRRWAMKMNGR-FRGIRLPRCRKLNWRAFA 187

Query: 64  LKVSFLMLLSRRIREIVNRMKVVEDVCPNIIFSTQWGLPVLSY 106
           + +S    ++    EI+NRMK+++D+CP I+FS  WGLPVLS+
Sbjct: 188 ILMS-PKRIAEMYGEIINRMKMMDDICPGIVFSGHWGLPVLSH 228

BLAST of PI0006706 vs. NCBI nr
Match: KAF5946811.1 (hypothetical protein HYC85_017039 [Camellia sinensis])

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-08
Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 0

Query: 11  GRRWECHYEKLYSSGGNRVVIMRRRRWMKKMLKRGMKGFRLYRFTRLRSSFGLKVSFLML 70
           G RW   Y++L S+   +V +  RRRW+ +M  + +KGFRL +  RL      K   +++
Sbjct: 8   GGRWTTRYKRLTSNDREKVAVRPRRRWVTRMNGK-LKGFRLPQSKRL----NWKAFSIVM 67

Query: 71  LSRRI----REIVNRMKVVEDVCPNIIFSTQWGLPVLSY 106
           L RR+     E+VNRMK  +++CP IIFS QWGLPVLS+
Sbjct: 68  LPRRMAQIYAEVVNRMK-TDEICPAIIFSGQWGLPVLSH 100

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LJ294.5e-4791.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035390 PE=4 SV=1[more]
A0A5D3BCS32.2e-4690.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6A4KLK91.7e-0940.78SHSP domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=26292... [more]
A0A7J7H3I96.3e-0943.43Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_017039 PE=4 SV=1[more]
A0A061F3B04.1e-0843.30Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026865 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN61039.19.3e-4791.51hypothetical protein Csa_021124 [Cucumis sativus][more]
KAA0056096.14.6e-4690.00hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa] >TYJ9642... [more]
KAG6599155.11.9e-2873.33Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia][more]
KAE9446725.13.4e-0940.78hypothetical protein C3L33_21367, partial [Rhododendron williamsianum][more]
KAF5946811.11.3e-0843.43hypothetical protein HYC85_017039 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35123:SF3OS07G0633900 PROTEINcoord: 10..105
NoneNo IPR availablePANTHERPTHR35123OS07G0633900 PROTEIN-RELATEDcoord: 10..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0006706.1PI0006706.1mRNA