PI0006624 (gene) Melon (PI 482460) v1

Overview
NamePI0006624
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 5993653 .. 5994016 (+)
RNA-Seq ExpressionPI0006624
SyntenyPI0006624
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTACCGTCACATTATTTCTTATCCCAAAATTTACTGTCACATGCCTCAGTGAATACCATCACAATACACGAAGAAATAGGACTAAATAGCAAGCAGAACGGGAGGAAAGCACGAACAACATATTTCTCCGTTTCTGTTGAGCAGGAGAAATCCCTGCTCCACAAATTTGTTACGTTGACAAGAATGAGTTTTGTCAAATCATCCAAGTTGATGAACAAAATTCCAGAAACTACAACAGTCTGGGCTTTAGCATATCCAATCAGAACTCAAGATCAAAACCAATGGTACAAGAACCTCAACAGTGCATCTCGTTACAGGCCGAAGTCATTTAGGGCATGTGACCTTGGGAGTAGGAGTTGA

mRNA sequence

ATGTTTACCGTCACATTATTTCTTATCCCAAAATTTACTGTCACATGCCTCAGTGAATACCATCACAATACACGAAGAAATAGGACTAAATATTTTGTCAAATCATCCAAGTTGATGAACAAAATTCCAGAAACTACAACAGTCTGGGCTTTAGCATATCCAATCAGAACTCAAGATCAAAACCAATGGTACAAGAACCTCAACAGTGCATCTCGTTACAGGCCGAAGTCATTTAGGGCATGTGACCTTGGGAGTAGGAGTTGA

Coding sequence (CDS)

ATGTTTACCGTCACATTATTTCTTATCCCAAAATTTACTGTCACATGCCTCAGTGAATACCATCACAATACACGAAGAAATAGGACTAAATATTTTGTCAAATCATCCAAGTTGATGAACAAAATTCCAGAAACTACAACAGTCTGGGCTTTAGCATATCCAATCAGAACTCAAGATCAAAACCAATGGTACAAGAACCTCAACAGTGCATCTCGTTACAGGCCGAAGTCATTTAGGGCATGTGACCTTGGGAGTAGGAGTTGA

Protein sequence

MFTVTLFLIPKFTVTCLSEYHHNTRRNRTKYFVKSSKLMNKIPETTTVWALAYPIRTQDQNQWYKNLNSASRYRPKSFRACDLGSRS
Homology
[Close]
BLAST of PI0006624 vs. ExPASy TrEMBL
Match: A0A0A0KFV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290290 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.2e-27
Identity = 71/111 (63.96%), Postives = 73/111 (65.77%), Query Frame = 0 

Query: 1   MFTVTLFLIPKFTVTCLSEYHHNTRRNRTKY----------------------------- 60
           MFTVTLFLIPKFTVT LSEYHHNTRRN+TKY                             
Sbjct: 1   MFTVTLFLIPKFTVTYLSEYHHNTRRNKTKYQAEREESTKNIFLRFVSVEQEKSLLHKFV 60

Query: 61  ------FVKSSKLMNKIPETTTVWALAYPIRTQDQNQWYKNLNSASRYRPK 77
                 FVKSSKL NKIPETTTVWALAYPIRTQDQNQWYKNLNSAS +RPK
Sbjct: 61  TFARMSFVKSSKLTNKIPETTTVWALAYPIRTQDQNQWYKNLNSASNHRPK 111

[Close]
BLAST of PI0006624 vs. NCBI nr
Match: KAE8647051.1 (hypothetical protein Csa_022965 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 8.8e-27
Identity = 71/111 (63.96%), Postives = 73/111 (65.77%), Query Frame = 0 

Query: 1   MFTVTLFLIPKFTVTCLSEYHHNTRRNRTKY----------------------------- 60
           MFTVTLFLIPKFTVT LSEYHHNTRRN+TKY                             
Sbjct: 12  MFTVTLFLIPKFTVTYLSEYHHNTRRNKTKYQAEREESTKNIFLRFVSVEQEKSLLHKFV 71

Query: 61  ------FVKSSKLMNKIPETTTVWALAYPIRTQDQNQWYKNLNSASRYRPK 77
                 FVKSSKL NKIPETTTVWALAYPIRTQDQNQWYKNLNSAS +RPK
Sbjct: 72  TFARMSFVKSSKLTNKIPETTTVWALAYPIRTQDQNQWYKNLNSASNHRPK 122

The following BLAST results are available for this feature:
BLAST of PI0006624 vs.
Match NameE-valueIdentityDescription
BLAST of PI0006624 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFV84.2e-2763.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290290 PE=4 SV=1[more]
BLAST of PI0006624 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647051.18.8e-2763.96hypothetical protein Csa_022965 [Cucumis sativus][more]
BLAST of PI0006624 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0006624.1PI0006624.1mRNA