Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAACGTCGCTCCTATGGTTAATTTCAGCAATCCATCTCTGAATCAGTTGTTAAATCAACTCAACATTGTCAAGTTAGAGCGAGGAAATTATTTGCTATGGAAGATCCTCGCCATGCCCATTGATAAGATGTTGAACAACAAAACAGAACATGAAGTAGAAAATGAGGCTCAACAAGCTCACACCAATTCAAGTAAAGAGGAAAATGAAGCACATGCTGAACATTCGTGGAAGAACTTTCCAAATCAAACCAATCAAGAGACAATCATTATGCCTCAAGGTCCAATGACAAGAGCTAAAACTAAAAGACTTTAAGATGGATTAAATGCTAAATTTTTAGCCTTTAATGACAAGTTGCAACAATTGGAATTTCAAGAATCATTTGGACATCCAAAAGTCATAATGAATCTAGAAATTCAGATTCATTCACATCTTTAATGCATTATGTACTTATTTAATATTATGTATTTTCCTTTATTATAGTAGTTGAAAGGGCATAAAATTAAATGTTGTGTCTTTTCATATAACCCTTTTAATTAGTACAAATAGGATTGTTGTTTCCACATTTGAAGAACAACTTGAATTTTAAATGAAATTTCTCATAGAGTTTTATCTTTAAGCTTTATGCTTTTCTTTGTATTCTTGTGTTAGAATGCATGTTTAGGACTTTCAATCTAGTTTGATCAATTAGATTGTGGAGAGTTCGAAATCTTGAGGTTAGGAACAAATTCTTCTTTCTTCTTGATCTTTGATCAACTTTTCCAAGTTAAAATTTGTTTAGCTTTCTTGGGGTTGTTCATCTAATTGTTAAATCGGGGTTATTCTTATTACTGTTATGGGGGTTCACCTAAAATAAGGATAGTTCTCAAATGTGATTGAGGTAGTTCCCTTTATCATCCATTCTCAAAGGTTATAAATTGGAAGAACACCTCACCGGAGAGAGTTCGTGCCCTGAAAAATTTCTTTCTGTCCCTGGCACTGGAGAGTCAAATGTCTCTGATACTGAAGCTGCGGCTGATAGAGCATCATGTTCACGAGTAGAGATACTGCAAGTGGTAAACCCTGAGTTTGAGAAATGGGTTACCACTGATTTACTTCTGCTGGGATGGTTATATAATTTCATGACCCCAGAAGTGACTGTTCAGTTAATGGGCTTCAACAATGCTAAAGATCTGTGGGAAGCAACACAAAATCTATTTGGGGCTTAA
mRNA sequence
ATGGCCAACGTCGCTCCTATGGTTAATTTCAGCAATCCATCTCTGAATCAGTTGTTAAATCAACTCAACATTGTCAAGTTAGAGCGAGGAAATTATTTGCTATGGAAGATCCTCGCCATGCCCATTGATAAGATGTTGAACAACAAAACAGAACATGAAGTAGAAAATGAGGCTCAACAAGCTCACACCAATTCAAGTTATAAATTGGAAGAACACCTCACCGGAGAGAGTTCGTGCCCTGAAAAATTTCTTTCTGTCCCTGGCACTGGAGAGTCAAATGTCTCTGATACTGAAGCTGCGGCTGATAGAGCATCATGTTCACGAGTAGAGATACTGCAAGTGGTAAACCCTGAGTTTGAGAAATGGGTTACCACTGATTTACTTCTGCTGGGATGGTTATATAATTTCATGACCCCAGAAGTGACTGTTCAGTTAATGGGCTTCAACAATGCTAAAGATCTGTGGGAAGCAACACAAAATCTATTTGGGGCTTAA
Coding sequence (CDS)
ATGGCCAACGTCGCTCCTATGGTTAATTTCAGCAATCCATCTCTGAATCAGTTGTTAAATCAACTCAACATTGTCAAGTTAGAGCGAGGAAATTATTTGCTATGGAAGATCCTCGCCATGCCCATTGATAAGATGTTGAACAACAAAACAGAACATGAAGTAGAAAATGAGGCTCAACAAGCTCACACCAATTCAAGTTATAAATTGGAAGAACACCTCACCGGAGAGAGTTCGTGCCCTGAAAAATTTCTTTCTGTCCCTGGCACTGGAGAGTCAAATGTCTCTGATACTGAAGCTGCGGCTGATAGAGCATCATGTTCACGAGTAGAGATACTGCAAGTGGTAAACCCTGAGTTTGAGAAATGGGTTACCACTGATTTACTTCTGCTGGGATGGTTATATAATTTCATGACCCCAGAAGTGACTGTTCAGTTAATGGGCTTCAACAATGCTAAAGATCTGTGGGAAGCAACACAAAATCTATTTGGGGCTTAA
Protein sequence
MANVAPMVNFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEHEVENEAQQAHTNSSYKLEEHLTGESSCPEKFLSVPGTGESNVSDTEAAADRASCSRVEILQVVNPEFEKWVTTDLLLLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFGA
Homology
BLAST of PI0006616 vs. ExPASy TrEMBL
Match:
A0A5D3BVJ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00450 PE=4 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 4.0e-34
Identity = 89/169 (52.66%), Postives = 106/169 (62.72%), Query Frame = 0
Query: 1 MANVAPMV-----NFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEHEVE 60
MAN +V NFSNP LNQLLNQL+ VKL+RGNYLLWK LA+PI K
Sbjct: 1 MANAVSLVEFLTTNFSNPPLNQLLNQLSSVKLDRGNYLLWKTLALPIMK----------- 60
Query: 61 NEAQQAHTNSSYKLEEHLTGESSCPEKFLSVP-GTGESNVSDTEAAADRASCSRVEILQV 120
SYK E HLTGE+ CP KF++ G +S + T A D AS SR +
Sbjct: 61 ----------SYKFEGHLTGENPCPPKFITNQIGESQSEIDGTAEATDGAS-SRSTATKT 120
Query: 121 VNPEFEKWVTTDLLLLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFG 164
VNP+F++W+T+ LLLLGW+YN MT EV QL GFN AKDLWEA Q+LFG
Sbjct: 121 VNPKFDQWLTSYLLLLGWIYNSMTAEVAFQLKGFNTAKDLWEAIQDLFG 147
BLAST of PI0006616 vs. ExPASy TrEMBL
Match:
A0A5A7VPY0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G001000 PE=4 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 4.0e-34
Identity = 79/158 (50.00%), Postives = 99/158 (62.66%), Query Frame = 0
Query: 6 PMVNFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEHEVENEAQQAHTNS 65
P +F+NP LNQ+LNQL +KL+RGNYLLWK LA+PI K
Sbjct: 13 PTTSFTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILK--------------------- 72
Query: 66 SYKLEEHLTGESSCPEKFLSVPGTGESNVSDTEAAADRASCSRVEILQVVNPEFEKWVTT 125
SYKL HL GES C K + + ++ + + + S + VNP++E+W+TT
Sbjct: 73 SYKLNSHLFGESPCLPKIIMLTTQPNESIVENAGEPSQETSSSSTAVVTVNPKYERWITT 132
Query: 126 DLLLLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFG 164
DLLLLGWLYN MTPEVT+QLMGF NAKDLWEATQ+LFG
Sbjct: 133 DLLLLGWLYNSMTPEVTIQLMGFTNAKDLWEATQDLFG 149
BLAST of PI0006616 vs. ExPASy TrEMBL
Match:
A0A1S4DY80 (uncharacterized protein LOC107991116 OS=Cucumis melo OX=3656 GN=LOC107991116 PE=4 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 4.0e-34
Identity = 79/158 (50.00%), Postives = 99/158 (62.66%), Query Frame = 0
Query: 6 PMVNFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEHEVENEAQQAHTNS 65
P +F+NP LNQ+LNQL +KL+RGNYLLWK LA+PI K
Sbjct: 88 PTTSFTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILK--------------------- 147
Query: 66 SYKLEEHLTGESSCPEKFLSVPGTGESNVSDTEAAADRASCSRVEILQVVNPEFEKWVTT 125
SYKL HL GES C K + + ++ + + + S + VNP++E+W+TT
Sbjct: 148 SYKLNSHLFGESPCLPKIIMLTTQPNESIVENAGEPSQETSSSSTAVVTVNPKYERWITT 207
Query: 126 DLLLLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFG 164
DLLLLGWLYN MTPEVT+QLMGF NAKDLWEATQ+LFG
Sbjct: 208 DLLLLGWLYNSMTPEVTIQLMGFTNAKDLWEATQDLFG 224
BLAST of PI0006616 vs. ExPASy TrEMBL
Match:
A0A1S4E1U9 (uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 4.8e-32
Identity = 86/172 (50.00%), Postives = 100/172 (58.14%), Query Frame = 0
Query: 1 MANVAP--------MVNFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEH 60
MAN P FSNP LNQ+LNQL VKL+R NYLLWK LA+PI K
Sbjct: 1 MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILK-------- 60
Query: 61 EVENEAQQAHTNSSYKLEEHLTGESSCPEKFLSVPGTGESNVSDTEAAADRASCSRVEIL 120
YKLE HLT E+ CP F V SN + TE AD + I
Sbjct: 61 -------------DYKLEGHLTAETPCPSHF--VLSASSSNTTVTEEGADATIGASSSIT 120
Query: 121 -QVVNPEFEKWVTTDLLLLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFG 164
++VNP FE+WVTTDLLLLGWLYN MTP+V +QLMGF N +DLW+ATQ+ FG
Sbjct: 121 PRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFG 149
BLAST of PI0006616 vs. ExPASy TrEMBL
Match:
A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 4.8e-32
Identity = 86/172 (50.00%), Postives = 100/172 (58.14%), Query Frame = 0
Query: 1 MANVAP--------MVNFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEH 60
MAN P FSNP LNQ+LNQL VKL+R NYLLWK LA+PI K
Sbjct: 1 MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILK-------- 60
Query: 61 EVENEAQQAHTNSSYKLEEHLTGESSCPEKFLSVPGTGESNVSDTEAAADRASCSRVEIL 120
YKLE HLT E+ CP F V SN + TE AD + I
Sbjct: 61 -------------DYKLEGHLTAETPCPSHF--VLSASSSNTTVTEEGADATIGASSSIT 120
Query: 121 -QVVNPEFEKWVTTDLLLLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFG 164
++VNP FE+WVTTDLLLLGWLYN MTP+V +QLMGF N +DLW+ATQ+ FG
Sbjct: 121 PRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFG 149
BLAST of PI0006616 vs. NCBI nr
Match:
KAA0067279.1 (uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa])
HSP 1 Score: 154.5 bits (389), Expect = 8.2e-34
Identity = 79/158 (50.00%), Postives = 99/158 (62.66%), Query Frame = 0
Query: 6 PMVNFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEHEVENEAQQAHTNS 65
P +F+NP LNQ+LNQL +KL+RGNYLLWK LA+PI K
Sbjct: 13 PTTSFTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILK--------------------- 72
Query: 66 SYKLEEHLTGESSCPEKFLSVPGTGESNVSDTEAAADRASCSRVEILQVVNPEFEKWVTT 125
SYKL HL GES C K + + ++ + + + S + VNP++E+W+TT
Sbjct: 73 SYKLNSHLFGESPCLPKIIMLTTQPNESIVENAGEPSQETSSSSTAVVTVNPKYERWITT 132
Query: 126 DLLLLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFG 164
DLLLLGWLYN MTPEVT+QLMGF NAKDLWEATQ+LFG
Sbjct: 133 DLLLLGWLYNSMTPEVTIQLMGFTNAKDLWEATQDLFG 149
BLAST of PI0006616 vs. NCBI nr
Match:
TYK02246.1 (uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa])
HSP 1 Score: 154.5 bits (389), Expect = 8.2e-34
Identity = 89/169 (52.66%), Postives = 106/169 (62.72%), Query Frame = 0
Query: 1 MANVAPMV-----NFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEHEVE 60
MAN +V NFSNP LNQLLNQL+ VKL+RGNYLLWK LA+PI K
Sbjct: 1 MANAVSLVEFLTTNFSNPPLNQLLNQLSSVKLDRGNYLLWKTLALPIMK----------- 60
Query: 61 NEAQQAHTNSSYKLEEHLTGESSCPEKFLSVP-GTGESNVSDTEAAADRASCSRVEILQV 120
SYK E HLTGE+ CP KF++ G +S + T A D AS SR +
Sbjct: 61 ----------SYKFEGHLTGENPCPPKFITNQIGESQSEIDGTAEATDGAS-SRSTATKT 120
Query: 121 VNPEFEKWVTTDLLLLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFG 164
VNP+F++W+T+ LLLLGW+YN MT EV QL GFN AKDLWEA Q+LFG
Sbjct: 121 VNPKFDQWLTSYLLLLGWIYNSMTAEVAFQLKGFNTAKDLWEAIQDLFG 147
BLAST of PI0006616 vs. NCBI nr
Match:
XP_016900937.1 (PREDICTED: uncharacterized protein LOC107991116 [Cucumis melo])
HSP 1 Score: 154.5 bits (389), Expect = 8.2e-34
Identity = 79/158 (50.00%), Postives = 99/158 (62.66%), Query Frame = 0
Query: 6 PMVNFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEHEVENEAQQAHTNS 65
P +F+NP LNQ+LNQL +KL+RGNYLLWK LA+PI K
Sbjct: 88 PTTSFTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILK--------------------- 147
Query: 66 SYKLEEHLTGESSCPEKFLSVPGTGESNVSDTEAAADRASCSRVEILQVVNPEFEKWVTT 125
SYKL HL GES C K + + ++ + + + S + VNP++E+W+TT
Sbjct: 148 SYKLNSHLFGESPCLPKIIMLTTQPNESIVENAGEPSQETSSSSTAVVTVNPKYERWITT 207
Query: 126 DLLLLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFG 164
DLLLLGWLYN MTPEVT+QLMGF NAKDLWEATQ+LFG
Sbjct: 208 DLLLLGWLYNSMTPEVTIQLMGFTNAKDLWEATQDLFG 224
BLAST of PI0006616 vs. NCBI nr
Match:
XP_031745012.1 (uncharacterized protein LOC116405217 [Cucumis sativus])
HSP 1 Score: 149.1 bits (375), Expect = 3.4e-32
Identity = 82/155 (52.90%), Postives = 97/155 (62.58%), Query Frame = 0
Query: 9 NFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEHEVENEAQQAHTNSSYK 68
NFSNP LNQ+LNQL VKL+RGNYLLW+ LA+PI K SYK
Sbjct: 14 NFSNPPLNQILNQLASVKLDRGNYLLWQTLALPILK---------------------SYK 73
Query: 69 LEEHLTGESSCPEKFLSVPGTGESNVSDTEAAADRASCSRVEILQVVNPEFEKWVTTDLL 128
L+ HLT E+ CP KF+ P G S+ S T + VNP+F++WVT DLL
Sbjct: 74 LQGHLTEENQCPPKFIINPTCGASSRSTT--------------TKTVNPKFDQWVTFDLL 133
Query: 129 LLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFG 164
LLGW+YN MTPEV +QLMGFN AKDLWEA Q+LFG
Sbjct: 134 LLGWMYNSMTPEVALQLMGFNTAKDLWEAIQDLFG 133
BLAST of PI0006616 vs. NCBI nr
Match:
XP_016902203.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo])
HSP 1 Score: 147.5 bits (371), Expect = 1.0e-31
Identity = 86/172 (50.00%), Postives = 100/172 (58.14%), Query Frame = 0
Query: 1 MANVAP--------MVNFSNPSLNQLLNQLNIVKLERGNYLLWKILAMPIDKMLNNKTEH 60
MAN P FSNP LNQ+LNQL VKL+R NYLLWK LA+PI K
Sbjct: 1 MANAQPTAAPPSLSSAGFSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILK-------- 60
Query: 61 EVENEAQQAHTNSSYKLEEHLTGESSCPEKFLSVPGTGESNVSDTEAAADRASCSRVEIL 120
YKLE HLT E+ CP F V SN + TE AD + I
Sbjct: 61 -------------DYKLEGHLTAETPCPSHF--VLSASSSNTTVTEEGADATIGASSSIT 120
Query: 121 -QVVNPEFEKWVTTDLLLLGWLYNFMTPEVTVQLMGFNNAKDLWEATQNLFG 164
++VNP FE+WVTTDLLLLGWLYN MTP+V +QLMGF N +DLW+ATQ+ FG
Sbjct: 121 PRIVNPLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFG 149
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BVJ1 | 4.0e-34 | 52.66 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7VPY0 | 4.0e-34 | 50.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S4DY80 | 4.0e-34 | 50.00 | uncharacterized protein LOC107991116 OS=Cucumis melo OX=3656 GN=LOC107991116 PE=... | [more] |
A0A1S4E1U9 | 4.8e-32 | 50.00 | uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S4E1U6 | 4.8e-32 | 50.00 | uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
Match Name | E-value | Identity | Description | |
KAA0067279.1 | 8.2e-34 | 50.00 | uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa] | [more] |
TYK02246.1 | 8.2e-34 | 52.66 | uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa] | [more] |
XP_016900937.1 | 8.2e-34 | 50.00 | PREDICTED: uncharacterized protein LOC107991116 [Cucumis melo] | [more] |
XP_031745012.1 | 3.4e-32 | 52.90 | uncharacterized protein LOC116405217 [Cucumis sativus] | [more] |
XP_016902203.1 | 1.0e-31 | 50.00 | PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |