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PI0006594 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGCAACCATGGGCAACTCCTCTTCTCCACCTGCCTTATCTACTCTCATTTTCACAATAGCCTTCTTCGTCTTTTCGTCCTCTTTAGCGATCATGGCCATGAGCAGTGACCGAAGTCTCAATTGGCTCTCAACAGAAGCACGATGTCATGGACGTTCAATAAGCGAATGCATGATGAATATTGAGTTTGAAATGGATTCTGAGATCAATCGTCGCATCTTAGCCACTTCGAGTTACATAAGTTACAAGTCATTGAGAGCAAACAACATTCCATGCTCTCGGAGAGGTTCGTCCTACTACAATTGCCAACCCGGAGCCGAAGCTAACCCGTATCAGCGGGGTTGTACCGCCATTACTCGTTGCAGAAGCTAAGAAAAACTCTATCTTCTTGTTTGATTTTTCCCGTTATTGTCTTTGTAACATAGAATAAATTTGAAAAAGGCTGTTGCCATGTTTGGGTTTGGAGTGTTATCAAGTATTTAGATTTTAACATTATTGTAAACTTATCTTTATGTCTTTGTAACATTAATCTTTACAAATATAAAATAACAAATTCTTGGGAGAAAATA AGGCAACCATGGGCAACTCCTCTTCTCCACCTGCCTTATCTACTCTCATTTTCACAATAGCCTTCTTCGTCTTTTCGTCCTCTTTAGCGATCATGGCCATGAGCAGTGACCGAAGTCTCAATTGGCTCTCAACAGAAGCACGATGTCATGGACGTTCAATAAGCGAATGCATGATGAATATTGAGTTTGAAATGGATTCTGAGATCAATCGTCGCATCTTAGCCACTTCGAGTTACATAAGTTACAAGTCATTGAGAGCAAACAACATTCCATGCTCTCGGAGAGGTTCGTCCTACTACAATTGCCAACCCGGAGCCGAAGCTAACCCGTATCAGCGGGGTTGTACCGCCATTACTCGTTGCAGAAGCTAAGAAAAACTCTATCTTCTTGTTTGATTTTTCCCGTTATTGTCTTTGTAACATAGAATAAATTTGAAAAAGGCTGTTGCCATGTTTGGGTTTGGAGTGTTATCAAGTATTTAGATTTTAACATTATTGTAAACTTATCTTTATGTCTTTGTAACATTAATCTTTACAAATATAAAATAACAAATTCTTGGGAGAAAATA ATGGGCAACTCCTCTTCTCCACCTGCCTTATCTACTCTCATTTTCACAATAGCCTTCTTCGTCTTTTCGTCCTCTTTAGCGATCATGGCCATGAGCAGTGACCGAAGTCTCAATTGGCTCTCAACAGAAGCACGATGTCATGGACGTTCAATAAGCGAATGCATGATGAATATTGAGTTTGAAATGGATTCTGAGATCAATCGTCGCATCTTAGCCACTTCGAGTTACATAAGTTACAAGTCATTGAGAGCAAACAACATTCCATGCTCTCGGAGAGGTTCGTCCTACTACAATTGCCAACCCGGAGCCGAAGCTAACCCGTATCAGCGGGGTTGTACCGCCATTACTCGTTGCAGAAGCTAA MGNSSSPPALSTLIFTIAFFVFSSSLAIMAMSSDRSLNWLSTEARCHGRSISECMMNIEFEMDSEINRRILATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS Homology
BLAST of PI0006594 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.6e-26 Identity = 64/121 (52.89%), Postives = 86/121 (71.07%), Query Frame = 0
BLAST of PI0006594 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.5e-24 Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 0
BLAST of PI0006594 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 6.4e-23 Identity = 60/118 (50.85%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of PI0006594 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 8.4e-23 Identity = 63/136 (46.32%), Postives = 85/136 (62.50%), Query Frame = 0
BLAST of PI0006594 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.9e-20 Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of PI0006594 vs. ExPASy TrEMBL
Match: A0A5A7TQI0 (Protein RALF-like 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00930 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.8e-53 Identity = 109/120 (90.83%), Postives = 113/120 (94.17%), Query Frame = 0
BLAST of PI0006594 vs. ExPASy TrEMBL
Match: A0A0A0KWI2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 2.8e-53 Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of PI0006594 vs. ExPASy TrEMBL
Match: A0A6J1J798 (protein RALF-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111482012 PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.1e-52 Identity = 108/121 (89.26%), Postives = 113/121 (93.39%), Query Frame = 0
BLAST of PI0006594 vs. ExPASy TrEMBL
Match: A0A6J1F244 (protein RALF-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111441696 PE=3 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 6.9e-52 Identity = 107/121 (88.43%), Postives = 114/121 (94.21%), Query Frame = 0
BLAST of PI0006594 vs. ExPASy TrEMBL
Match: A0A6J5XM33 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34632 PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 8.2e-29 Identity = 71/124 (57.26%), Postives = 90/124 (72.58%), Query Frame = 0
BLAST of PI0006594 vs. NCBI nr
Match: KGN52797.1 (hypothetical protein Csa_014956 [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 5.7e-53 Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of PI0006594 vs. NCBI nr
Match: KAA0044366.1 (protein RALF-like 33 [Cucumis melo var. makuwa]) HSP 1 Score: 217.6 bits (553), Expect = 5.7e-53 Identity = 109/120 (90.83%), Postives = 113/120 (94.17%), Query Frame = 0
BLAST of PI0006594 vs. NCBI nr
Match: XP_023529110.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216.5 bits (550), Expect = 1.3e-52 Identity = 108/121 (89.26%), Postives = 114/121 (94.21%), Query Frame = 0
BLAST of PI0006594 vs. NCBI nr
Match: XP_022983404.1 (protein RALF-like 1 [Cucurbita maxima]) HSP 1 Score: 214.2 bits (544), Expect = 6.4e-52 Identity = 108/121 (89.26%), Postives = 113/121 (93.39%), Query Frame = 0
BLAST of PI0006594 vs. NCBI nr
Match: XP_022934551.1 (protein RALF-like 1 [Cucurbita moschata]) HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51 Identity = 107/121 (88.43%), Postives = 114/121 (94.21%), Query Frame = 0
BLAST of PI0006594 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 ) HSP 1 Score: 119.0 bits (297), Expect = 2.6e-27 Identity = 64/121 (52.89%), Postives = 86/121 (71.07%), Query Frame = 0
BLAST of PI0006594 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 ) HSP 1 Score: 112.1 bits (279), Expect = 3.2e-25 Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 0
BLAST of PI0006594 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 ) HSP 1 Score: 107.8 bits (268), Expect = 6.0e-24 Identity = 63/136 (46.32%), Postives = 85/136 (62.50%), Query Frame = 0
BLAST of PI0006594 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 ) HSP 1 Score: 99.0 bits (245), Expect = 2.8e-21 Identity = 48/75 (64.00%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of PI0006594 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 ) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16 Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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