PI0006492 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTAATGGCGGCTTCAACTTAGAACCCTAATTCTTCTCCTTCTGCTTATTATTATTATTCTTCCTTCTCTCTCTTTCTAAGTTTCTTCCATGGATAATTTCTCTGAGGATAAAAAGCGAGTTCGCGACGAGTTCGACGATGACTCGTTGGCCGATTCAGCCGAGTCCAAGCTTAGACGTCTCAACTCATCGGATTTGAGATTTGTGAAGCCATGCACCAAGGAGAATTTCAATGTTGTTCCAGATTCATCTGCTGTTGCTGGTGATTTGAATATTGATGATTTGGTAGAATCTGAGGAGATTCAGGATGGGTTGTTACTCAATATTCTTGAAGATTCAGACGGTGCAGCAGAGCGAGATGGGAGTATTGAAGGTCTTGAACTTGATTCGTTTATTAAAAGCTTTGAGGAAGAAATTCAAGCCGTGCCCTCGTCGGTGGATCAGAATGAAACTCCTCAAGCGGAACTCGGATATTTATTCGAGGCGTCGGATGATGAGTTAGGGTTACCGCCGAGTGGAGGTTTGAGTACGGAAGGGAAGATGGAGGCGATTGATTTTACGCCTCCTGCTTCTTGTTGTTCTCCTGATGTGTTCGAGTTGGAAGGGAAGTTAGGGTTTTTTGGTGATGAGATTCCGTGTTACGACTCGTTCGAGTTGGGAATGGGGATTGGTTCCGGTGCGGTGCCGGAGGAGAATGGGTTGGGCGGTGGAGAGTTTGTTGCATTGGGTGGTTTGTTTGATTATTCCGACGTGCCGTTTCGGCCGGAGTCGTTATCGGCTTTGTAGAAACGGTTTTCGAATGGGTAGATGTGGTTTTTGGGTTTTTCTTTTAGGGTTGGTTTTTCTCACGTGTTGCTGCGTGGGAACCGACGTCGTTTTATGTTTTTAGGTTGTAAATTTGGAAAAATTAAAAAAAAAGAAAAGAAAAAGAAAGCACACAAATTTCAGAATAGAAAATGCAGAATTTAAAAAAACAATGTTTTTAGAATTTTTATTTTCTGTGGGGTTTATTATTGGTTGATATGGAAGGACTTTTGGAAATTTGACAAGATCATTTAAATATTTTATATTATAAGTTAAGATATGTGTCCGTTGAAATTTCAAATTCTTTATCTTTTAGCACATTGTTGAAATGAATTTAATTAGTGAAAGATTTTATTTAATGTCTATTTTAGCATTAATATAAGTATATAACCATTGAGATTGGGAGTGTGTGATCTAGAGTAAGGATAGTTTGAAATTAGCTTGGCTTTTAAAATAATTGGTGAAAGAAGTAAATTAGTGTTT CTCTCTAATGGCGGCTTCAACTTAGAACCCTAATTCTTCTCCTTCTGCTTATTATTATTATTCTTCCTTCTCTCTCTTTCTAAGTTTCTTCCATGGATAATTTCTCTGAGGATAAAAAGCGAGTTCGCGACGAGTTCGACGATGACTCGTTGGCCGATTCAGCCGAGTCCAAGCTTAGACGTCTCAACTCATCGGATTTGAGATTTGTGAAGCCATGCACCAAGGAGAATTTCAATGTTGTTCCAGATTCATCTGCTGTTGCTGGTGATTTGAATATTGATGATTTGGTAGAATCTGAGGAGATTCAGGATGGGTTGTTACTCAATATTCTTGAAGATTCAGACGGTGCAGCAGAGCGAGATGGGAGTATTGAAGGTCTTGAACTTGATTCGTTTATTAAAAGCTTTGAGGAAGAAATTCAAGCCGTGCCCTCGTCGGTGGATCAGAATGAAACTCCTCAAGCGGAACTCGGATATTTATTCGAGGCGTCGGATGATGAGTTAGGGTTACCGCCGAGTGGAGGTTTGAGTACGGAAGGGAAGATGGAGGCGATTGATTTTACGCCTCCTGCTTCTTGTTGTTCTCCTGATGTGTTCGAGTTGGAAGGGAAGTTAGGGTTTTTTGGTGATGAGATTCCGTGTTACGACTCGTTCGAGTTGGGAATGGGGATTGGTTCCGGTGCGGTGCCGGAGGAGAATGGGTTGGGCGGTGGAGAGTTTGTTGCATTGGGTGGTTTGTTTGATTATTCCGACGTGCCGTTTCGGCCGGAGTCGTTATCGGCTTTGTAGAAACGGTTTTCGAATGGGTAGATGTGGTTTTTGGGTTTTTCTTTTAGGGTTGGTTTTTCTCACGTGTTGCTGCGTGGGAACCGACGTCGTTTTATGTTTTTAGGTTGTAAATTTGGAAAAATTAAAAAAAAAGAAAAGAAAAAGAAAGCACACAAATTTCAGAATAGAAAATGCAGAATTTAAAAAAACAATGTTTTTAGAATTTTTATTTTCTGTGGGGTTTATTATTGGTTGATATGGAAGGACTTTTGGAAATTTGACAAGATCATTTAAATATTTTATATTATAAGTTAAGATATGTGTCCGTTGAAATTTCAAATTCTTTATCTTTTAGCACATTGTTGAAATGAATTTAATTAGTGAAAGATTTTATTTAATGTCTATTTTAGCATTAATATAAGTATATAACCATTGAGATTGGGAGTGTGTGATCTAGAGTAAGGATAGTTTGAAATTAGCTTGGCTTTTAAAATAATTGGTGAAAGAAGTAAATTAGTGTTT ATGGATAATTTCTCTGAGGATAAAAAGCGAGTTCGCGACGAGTTCGACGATGACTCGTTGGCCGATTCAGCCGAGTCCAAGCTTAGACGTCTCAACTCATCGGATTTGAGATTTGTGAAGCCATGCACCAAGGAGAATTTCAATGTTGTTCCAGATTCATCTGCTGTTGCTGGTGATTTGAATATTGATGATTTGGTAGAATCTGAGGAGATTCAGGATGGGTTGTTACTCAATATTCTTGAAGATTCAGACGGTGCAGCAGAGCGAGATGGGAGTATTGAAGGTCTTGAACTTGATTCGTTTATTAAAAGCTTTGAGGAAGAAATTCAAGCCGTGCCCTCGTCGGTGGATCAGAATGAAACTCCTCAAGCGGAACTCGGATATTTATTCGAGGCGTCGGATGATGAGTTAGGGTTACCGCCGAGTGGAGGTTTGAGTACGGAAGGGAAGATGGAGGCGATTGATTTTACGCCTCCTGCTTCTTGTTGTTCTCCTGATGTGTTCGAGTTGGAAGGGAAGTTAGGGTTTTTTGGTGATGAGATTCCGTGTTACGACTCGTTCGAGTTGGGAATGGGGATTGGTTCCGGTGCGGTGCCGGAGGAGAATGGGTTGGGCGGTGGAGAGTTTGTTGCATTGGGTGGTTTGTTTGATTATTCCGACGTGCCGTTTCGGCCGGAGTCGTTATCGGCTTTGTAG MDNFSEDKKRVRDEFDDDSLADSAESKLRRLNSSDLRFVKPCTKENFNVVPDSSAVAGDLNIDDLVESEEIQDGLLLNILEDSDGAAERDGSIEGLELDSFIKSFEEEIQAVPSSVDQNETPQAELGYLFEASDDELGLPPSGGLSTEGKMEAIDFTPPASCCSPDVFELEGKLGFFGDEIPCYDSFELGMGIGSGAVPEENGLGGGEFVALGGLFDYSDVPFRPESLSAL Homology
BLAST of PI0006492 vs. ExPASy TrEMBL
Match: A0A0A0LQD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042270 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 4.2e-98 Identity = 206/240 (85.83%), Postives = 211/240 (87.92%), Query Frame = 0
BLAST of PI0006492 vs. ExPASy TrEMBL
Match: A0A6J1GR95 (uncharacterized protein LOC111456805 OS=Cucurbita moschata OX=3662 GN=LOC111456805 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 1.1e-71 Identity = 164/234 (70.09%), Postives = 187/234 (79.91%), Query Frame = 0
BLAST of PI0006492 vs. ExPASy TrEMBL
Match: A0A6J1E811 (uncharacterized protein LOC111431577 OS=Cucurbita moschata OX=3662 GN=LOC111431577 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 2.8e-70 Identity = 166/235 (70.64%), Postives = 185/235 (78.72%), Query Frame = 0
BLAST of PI0006492 vs. ExPASy TrEMBL
Match: A0A6J1K097 (uncharacterized protein LOC111489916 OS=Cucurbita maxima OX=3661 GN=LOC111489916 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 3.5e-68 Identity = 158/234 (67.52%), Postives = 183/234 (78.21%), Query Frame = 0
BLAST of PI0006492 vs. ExPASy TrEMBL
Match: A0A6J5XCW8 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34317 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32 Identity = 119/255 (46.67%), Postives = 145/255 (56.86%), Query Frame = 0
BLAST of PI0006492 vs. NCBI nr
Match: XP_011660345.1 (uncharacterized protein LOC105436376 [Cucumis sativus] >KGN64115.1 hypothetical protein Csa_013822 [Cucumis sativus]) HSP 1 Score: 367.5 bits (942), Expect = 8.6e-98 Identity = 206/240 (85.83%), Postives = 211/240 (87.92%), Query Frame = 0
BLAST of PI0006492 vs. NCBI nr
Match: XP_038894861.1 (uncharacterized protein LOC120083261 [Benincasa hispida]) HSP 1 Score: 328.6 bits (841), Expect = 4.5e-86 Identity = 191/232 (82.33%), Postives = 197/232 (84.91%), Query Frame = 0
BLAST of PI0006492 vs. NCBI nr
Match: XP_022954576.1 (uncharacterized protein LOC111456805 [Cucurbita moschata]) HSP 1 Score: 279.6 bits (714), Expect = 2.4e-71 Identity = 164/234 (70.09%), Postives = 187/234 (79.91%), Query Frame = 0
BLAST of PI0006492 vs. NCBI nr
Match: KAG6584364.1 (hypothetical protein SDJN03_20296, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 278.5 bits (711), Expect = 5.3e-71 Identity = 168/235 (71.49%), Postives = 186/235 (79.15%), Query Frame = 0
BLAST of PI0006492 vs. NCBI nr
Match: KAG7019949.1 (hypothetical protein SDJN02_18916, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 276.9 bits (707), Expect = 1.5e-70 Identity = 167/235 (71.06%), Postives = 186/235 (79.15%), Query Frame = 0
BLAST of PI0006492 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 74.3 bits (181), Expect = 1.4e-13 Identity = 63/185 (34.05%), Postives = 89/185 (48.11%), Query Frame = 0
BLAST of PI0006492 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-11 Identity = 55/166 (33.13%), Postives = 80/166 (48.19%), Query Frame = 0
BLAST of PI0006492 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-10 Identity = 54/162 (33.33%), Postives = 78/162 (48.15%), Query Frame = 0
BLAST of PI0006492 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 6.8e-08 Identity = 63/179 (35.20%), Postives = 81/179 (45.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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