PI0006481 (gene) Melon (PI 482460) v1

Overview


Name	PI0006481
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Gag-pro-like protein
Location	chr10: 8750086 .. 8752933 (+)
RNA-Seq Expression	PI0006481
Synteny	PI0006481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAACAAACTAATGATCGGGTTCAAGCAGTTCGTTAGGATGTTGAAGGATTGAAAGATCAATAGGCAAAGGTCCTATGGCTGCTCACTACTGGAAATAAAAATATTGTTGCGGGGACTTTATCATAAGGAGCAGTTGATTTGAACCAGATGCTAGAGGACTTGCCTACATACCTTTCAGGATTTACTCCTCAAAGGTCGTCTAGGCCATGCAAGGCGGATAGGGCATCCTACATCCTTTCCTGTGCAAAATCCTAACCTGATCTCGCAACAGACAGCCCACGTGAGTGATTCAATATCTACCCCAGTTATAGAAAGTGGTAAGAAAGTTTTAGAAGATTAGGGTAGTAGAAAAATACTGGAATTTCTGGAAGAAAGATTGTGCGCGATTGAAGGTGCATGTATGAGGGGTATTGACGCAATGCAGTTATGTTTGATATCAGATGTGGTGATCCCTCCCGAATTCAAGACTCCAAATTTTGAGAAATACAATGGAACCACATGTCCAATGTTGGGTTTTATGTCCTAAAACTCGTAGATAGTAAATGTAATCCATTGACTTTTATTAATAAAAGTGTTATTATTATAATTTCAATAAAGCGTTATTGATTATATTATTAGTTGTCTTAATAACCTAAATTCAATAAACTAACATCCTAAGTTGTTTGATGTGTCTTGAACTGTAGGTGGAGCCATACAAGGATCAATGTTCGAAATACAACTTAAAAGGTCTATAGTATAGGGATAAGGCTGGGTACCTTATCCTGGTAACACTATGGATATGACTCACTTTGTATTTGATACAAACGTAATGATCCAATGCGTTCGTGTAGGTGACATGTGAGTGAAGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGTAACCACCAGATGTAACTCCGTTAACTAGTTAGGTTTCTATTTCATTAGGATGACCTAGGTAACTTAGTCTTAATCCTGAGTGTATTATGAACTTTTGTTCGCAAGGGACTGTCCTTTGATTTGTACGGATGAGAGTGGCCAGATTGTCGACTCAATATGCTTATCATTTTGGGGACAAGATCGAGTAAGAAGTTGGAAACATAATCACACAAGATGGAATTCACTCATTCCCAACTTTAGGGTAAGTAGATGAGTGCTCCCTTAAATGGTATCTCCGAAACTTGAACAAAGGGCCCTATCCTCTCTATGGCACGAGAAGGGTTTTTCTGTTTATTGGTTGGACCATAAACAAGTTGTTCATTAGAGGAGCACTGATATTTAAGGACTAGAAGTAACCTAGGGGTAAAACGATAATTTGACCCAGTTAGTGCTACAGACACTCGTGAAGGACTATCTTATTGTCATTGGTCTATATCCATGGACATAGAAATATATCTACAGTGAGAAGAGTTCAACTGTGAGTCTTTAGTGGAGTGTACACACAGTTAACGAATATTCAATAATGTGGTTAATGAGTTTAGCCAATTAATTTCATATCATTGTAGCTTCTGATCTGTAGGTCCATTAGGTCCCCTTCCTAGCTCGTAAAGGGTATTGAGATTAATATATATTGGTTGTAATTTGAAATGTTTAAATTTACTTTGGGAATTAATATAATGTATGGTGATACATTATAATATAAAGTTTATATTTTTTTAATTAAACTTTATTATATAAATTTAATTTTGGATATGATTCAAAATTAATTTATGATAGACTAAAATATTTGAATGAGTTCAAATATTAATTTAATATGAATTAGATTTATATTAAAACTATAAGTTAAAATTTAATGTGTATATGATGCAGATTAAAACTATAGGTTATGAGAGAAATTTATATTTGAATATGATTCAAAATTTTGAATTAAATTAAATATAAGATATTTAATTTAGCAATTAATTAATTGGAGAATTAATTAATAGTTTAGTTTTATTTTATTTAATTAAATTTGATTTAATTAAATTAATTAAATTAAAACTATAGGTTATGTGAGAGATATTCATTTAAATATGATTTAAATGAAATATTAATTAAATATGGTTTAGTTAATTATTAATTAATATGATTTAATTAATTATTTAATTATTTTAATTAATTAATTATTTTTAATATTAATTTAAATTAACTTAAATTAATAACTCCCTTAGTTAAGGGAGTTATTTAGGGAACGTTGGTGGTCTTCCCACGTATCCCTAAAATCTCTCAAATTCCCCTTCTTCAGAATGAAGAAAGGGGAAGCAAACGCAAAAGTGTTGGTTCGTCACTTTTGGTACTCTGCGTTCTGTGACTTCTTTCTTAGAAAGAAAAAAAAAACACCTCTCTCTGCAAAAACATTCCCTACCAATTATTGGTTCCCACAAACCAGTTCTCAGCCTAGAGAATAGGGAAGTTTCCAAGTGATGGTGTCAGTGGTAGATACCGAAGTGTCCAATACAGAGTCGACAACGTACGTGAGTTTTAGTTTCCTTCTCTGTATTTATTTTTTTAAAAAAAGCATGCTTAACCTAGAAATTAGTTTCTGTCTGTGATTTTTCCAATGTATGGGTATTTTTCCAATTTCCAATTAAATTTGAAAATAGTCTCCGTAAATTATTTTCTGATGCGTGAGGGCTCTCATCCCTTCACCCAAAAAGTCATCTATCTATGTACTGTCGAAAAATGTCAGCTTACGCTCATGATGATAAATTGTTGATTCATTGTTTCCAAGACAACTTAGTTGGCCCGACTTCTCCCTGGTACATGCAATTGGAGGGTTCACAAGTGCATAAGTGGAAAGATCTTGCCGATTCATTCTTGAAACAATATAAGTACAATATTGATATGGCACCCGATCATCTGGATCTTTAG

mRNA sequence

ATGGATGAACAAACTAATGATCGGGTTCAAGCAGCAAAGGTCCTATGGCTGCTCACTACTGGAAATAAAAATATTGATTTACTCCTCAAAGGTCGTCTAGGCCATGCAAGGCGGATAGGGCATCCTACATCCTTTCCTGTGCAAAATCCTAACCTGATCTCGCAACAGACAGCCCACGTGAGTGATTCAATATCTACCCCAGGTAGTAGAAAAATACTGGAATTTCTGGAAGAAAGATTGTGCGCGATTGAAGGTGCATGTATGAGGGGTATTGACGCAATGCAGTTATGTTTGATATCAGATGTGGTGATCCCTCCCGAATTCAAGACTCCAAATTTTGAGAAATACAATGGAACCACATGTCCAATTCATCTATCTATGTACTGTCGAAAAATGTCAGCTTACGCTCATGATGATAAATTGTTGATTCATTGTTTCCAAGACAACTTAGTTGGCCCGACTTCTCCCTGGTACATGCAATTGGAGGGTTCACAAGTGCATAAGTGGAAAGATCTTGCCGATTCATTCTTGAAACAATATAAGTACAATATTGATATGGCACCCGATCATCTGGATCTTTAG

Coding sequence (CDS)

ATGGATGAACAAACTAATGATCGGGTTCAAGCAGCAAAGGTCCTATGGCTGCTCACTACTGGAAATAAAAATATTGATTTACTCCTCAAAGGTCGTCTAGGCCATGCAAGGCGGATAGGGCATCCTACATCCTTTCCTGTGCAAAATCCTAACCTGATCTCGCAACAGACAGCCCACGTGAGTGATTCAATATCTACCCCAGGTAGTAGAAAAATACTGGAATTTCTGGAAGAAAGATTGTGCGCGATTGAAGGTGCATGTATGAGGGGTATTGACGCAATGCAGTTATGTTTGATATCAGATGTGGTGATCCCTCCCGAATTCAAGACTCCAAATTTTGAGAAATACAATGGAACCACATGTCCAATTCATCTATCTATGTACTGTCGAAAAATGTCAGCTTACGCTCATGATGATAAATTGTTGATTCATTGTTTCCAAGACAACTTAGTTGGCCCGACTTCTCCCTGGTACATGCAATTGGAGGGTTCACAAGTGCATAAGTGGAAAGATCTTGCCGATTCATTCTTGAAACAATATAAGTACAATATTGATATGGCACCCGATCATCTGGATCTTTAG

Protein sequence

MDEQTNDRVQAAKVLWLLTTGNKNIDLLLKGRLGHARRIGHPTSFPVQNPNLISQQTAHVSDSISTPGSRKILEFLEERLCAIEGACMRGIDAMQLCLISDVVIPPEFKTPNFEKYNGTTCPIHLSMYCRKMSAYAHDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPDHLDL

Homology

[Close]

BLAST of PI0006481 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65
Identity = 146/244 (59.84%), Postives = 164/244 (67.21%), Query Frame = 0


Query: 1   MDEQTNDRVQA------------AKVLWLLTTG--------NKNIDLLLKGRL------- 60
           MDEQTND+VQA            AK+L LLTTG        +  +++ L   L       
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  -------GHARRIG---HPTSFPVQNPNLISQQTAHVSDSIST------------PGSRK 120
                    + R+G   +PTSFP  NPN  +QQ AH ++ IST             GSR+
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ILEFLEERLCAIEGACMRG-IDAMQLCLISDVVIPPEFKTPNFEKYNGTTCP-IHLSMYC 180
            LEFLEERL  IEGA M G IDA QLCLISDVVIPP+FKTP+FEKYNGT+CP  HL MYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPD 194
           RKMSAYAHDDKLLIHCFQDNLVGP S WYMQL+GSQVH+WKDLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

[Close]

BLAST of PI0006481 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.9e-65
Identity = 145/244 (59.43%), Postives = 164/244 (67.21%), Query Frame = 0


Query: 1   MDEQTNDRVQA------------AKVLWLLTTG--------NKNIDLLLKGRL------- 60
           MDEQTND+VQA            AK+L LLTTG        +  +++ L   L       
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  -------GHARRIG---HPTSFPVQNPNLISQQTAHVSDSIST------------PGSRK 120
                    + R+G   +PTSFP  NPN  +QQ AH ++ IST             GSR+
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ILEFLEERLCAIEGACMRG-IDAMQLCLISDVVIPPEFKTPNFEKYNGTTCP-IHLSMYC 180
            LEFLEERL  IEGA M G IDA QLCLISDVVIPP+FKTP+FEKYNGT+CP  HL MYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPD 194
           RKMSAYAHDDKLLIHCFQD+LVGP S WYMQL+GSQVH+WKDLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

[Close]

BLAST of PI0006481 vs. ExPASy TrEMBL
Match: A0A5A7T401 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00270 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.9e-65
Identity = 143/237 (60.34%), Postives = 163/237 (68.78%), Query Frame = 0


Query: 1   MDEQTNDRVQA------------AKVLWLLTTGNK------------NIDLLLKGRLGH- 60
           MDEQTND+VQA            AK+L L TTG +            +++ +L+    + 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  ----ARRIGHP-TSFPVQNPNLISQQTAHVSDSISTP------------GSRKILEFLEE 120
                +R   P  ++P QNPN I+QQT HVSD +STP             SRK LEFLEE
Sbjct: 61  IGFTPQRSSSPRMTYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEFLEE 120

Query: 121 RLCAIEGACMRG-IDAMQLCLISDVVIPPEFKTPNFEKYNGTTCP-IHLSMYCRKMSAYA 180
           RL  IEGA M G IDA QLCLISDVVIPP+FKTP+FEKYNGTTCP  HL MYC+KMSAYA
Sbjct: 121 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMSAYA 180

Query: 181 HDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPDHLDL 194
           HDDKLLIHCFQD+LVGPTS WYMQL+GSQVH+WKDLADSFLKQY YNIDM PD LDL
Sbjct: 181 HDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPDRLDL 237

[Close]

BLAST of PI0006481 vs. ExPASy TrEMBL
Match: A0A1S4E534 (uncharacterized protein LOC103502838 OS=Cucumis melo OX=3656 GN=LOC103502838 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.9e-65
Identity = 143/237 (60.34%), Postives = 163/237 (68.78%), Query Frame = 0


Query: 1   MDEQTNDRVQA------------AKVLWLLTTGNK------------NIDLLLKGRLGH- 60
           MDEQTND+VQA            AK+L L TTG +            +++ +L+    + 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  ----ARRIGHP-TSFPVQNPNLISQQTAHVSDSISTP------------GSRKILEFLEE 120
                +R   P  ++P QNPN I+QQT HVSD +STP             SRK LEFLEE
Sbjct: 61  IGFTPQRSSSPRMTYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEFLEE 120

Query: 121 RLCAIEGACMRG-IDAMQLCLISDVVIPPEFKTPNFEKYNGTTCP-IHLSMYCRKMSAYA 180
           RL  IEGA M G IDA QLCLISDVVIPP+FKTP+FEKYNGTTCP  HL MYC+KMSAYA
Sbjct: 121 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMSAYA 180

Query: 181 HDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPDHLDL 194
           HDDKLLIHCFQD+LVGPTS WYMQL+GSQVH+WKDLADSFLKQY YNIDM PD LDL
Sbjct: 181 HDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPDRLDL 237

[Close]

BLAST of PI0006481 vs. ExPASy TrEMBL
Match: A0A5A7V1Y8 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00010 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.5e-64
Identity = 143/244 (58.61%), Postives = 158/244 (64.75%), Query Frame = 0


Query: 1   MDEQTNDRVQA------------AKVLWLLTTG------------NKNIDLLLKGRLGHA 60
           MDEQTND+VQA            AK+L LLTTG              +++ +L+  L + 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  RRI-------------GHPTSFPVQNPNLISQQTAHVSDSISTP------------GSRK 120
                            +PTSFP  NPN  +QQ AHVSD ISTP            GSRK
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120

Query: 121 ILEFLEERLCAIEGACM-RGIDAMQLCLISDVVIPPEFKTPNFEKYNGTTCP-IHLSMYC 180
            LEFLEERLC IEG  M   IDA QLCLISDVVIP +FK P+FEKYNGTTCP  HL MYC
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPD 194
           RKMS YAHDDKLLIH FQD+LVGP S WYMQ +GSQVH+W DLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240

[Close]

BLAST of PI0006481 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 2.1e-65
Identity = 146/244 (59.84%), Postives = 164/244 (67.21%), Query Frame = 0


Query: 1   MDEQTNDRVQA------------AKVLWLLTTG--------NKNIDLLLKGRL------- 60
           MDEQTND+VQA            AK+L LLTTG        +  +++ L   L       
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDMPAYP 60

Query: 61  -------GHARRIG---HPTSFPVQNPNLISQQTAHVSDSIST------------PGSRK 120
                    + R+G   +PTSFP  NPN  +QQ AH ++ IST             GSR+
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPTPNPNTTTQQVAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ILEFLEERLCAIEGACMRG-IDAMQLCLISDVVIPPEFKTPNFEKYNGTTCP-IHLSMYC 180
            LEFLEERL  IEGA M G IDA QLCLISDVVIPP+FKTP+FEKYNGT+CP  HL MYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPD 194
           RKMSAYAHDDKLLIHCFQDNLVGP S WYMQL+GSQVH+WKDLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDNLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

[Close]

BLAST of PI0006481 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 257.7 bits (657), Expect = 8.1e-65
Identity = 145/244 (59.43%), Postives = 164/244 (67.21%), Query Frame = 0


Query: 1   MDEQTNDRVQA------------AKVLWLLTTG--------NKNIDLLLKGRL------- 60
           MDEQTND+VQA            AK+L LLTTG        +  +++ L   L       
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVVGTSSQVEVDLNQVLEDMPTYP 60

Query: 61  -------GHARRIG---HPTSFPVQNPNLISQQTAHVSDSIST------------PGSRK 120
                    + R+G   +PTSFP  NPN  +QQ AH ++ IST             GSR+
Sbjct: 61  PGFTPQRSSSPRMGDRTYPTSFPAPNPNTTTQQAAHANNPISTLIMEGGKKISEEQGSRR 120

Query: 121 ILEFLEERLCAIEGACMRG-IDAMQLCLISDVVIPPEFKTPNFEKYNGTTCP-IHLSMYC 180
            LEFLEERL  IEGA M G IDA QLCLISDVVIPP+FKTP+FEKYNGT+CP  HL MYC
Sbjct: 121 RLEFLEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTSCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPD 194
           RKMSAYAHDDKLLIHCFQD+LVGP S WYMQL+GSQVH+WKDLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSAYAHDDKLLIHCFQDSLVGPASRWYMQLDGSQVHRWKDLADSFLKQYKYNIDMAPD 240

[Close]

BLAST of PI0006481 vs. NCBI nr
Match: XP_016903339.1 (PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo])

HSP 1 Score: 257.7 bits (657), Expect = 8.1e-65
Identity = 143/237 (60.34%), Postives = 163/237 (68.78%), Query Frame = 0


Query: 1   MDEQTNDRVQA------------AKVLWLLTTGNK------------NIDLLLKGRLGH- 60
           MDEQTND+VQA            AK+L L TTG +            +++ +L+    + 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  ----ARRIGHP-TSFPVQNPNLISQQTAHVSDSISTP------------GSRKILEFLEE 120
                +R   P  ++P QNPN I+QQT HVSD +STP             SRK LEFLEE
Sbjct: 61  IGFTPQRSSSPRMTYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEFLEE 120

Query: 121 RLCAIEGACMRG-IDAMQLCLISDVVIPPEFKTPNFEKYNGTTCP-IHLSMYCRKMSAYA 180
           RL  IEGA M G IDA QLCLISDVVIPP+FKTP+FEKYNGTTCP  HL MYC+KMSAYA
Sbjct: 121 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMSAYA 180

Query: 181 HDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPDHLDL 194
           HDDKLLIHCFQD+LVGPTS WYMQL+GSQVH+WKDLADSFLKQY YNIDM PD LDL
Sbjct: 181 HDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPDRLDL 237

[Close]

BLAST of PI0006481 vs. NCBI nr
Match: KAA0037703.1 (uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 257.7 bits (657), Expect = 8.1e-65
Identity = 143/237 (60.34%), Postives = 163/237 (68.78%), Query Frame = 0


Query: 1   MDEQTNDRVQA------------AKVLWLLTTGNK------------NIDLLLKGRLGH- 60
           MDEQTND+VQA            AK+L L TTG +            +++ +L+    + 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  ----ARRIGHP-TSFPVQNPNLISQQTAHVSDSISTP------------GSRKILEFLEE 120
                +R   P  ++P QNPN I+QQT HVSD +STP             SRK LEFLEE
Sbjct: 61  IGFTPQRSSSPRMTYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEFLEE 120

Query: 121 RLCAIEGACMRG-IDAMQLCLISDVVIPPEFKTPNFEKYNGTTCP-IHLSMYCRKMSAYA 180
           RL  IEGA M G IDA QLCLISDVVIPP+FKTP+FEKYNGTTCP  HL MYC+KMSAYA
Sbjct: 121 RLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMSAYA 180

Query: 181 HDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPDHLDL 194
           HDDKLLIHCFQD+LVGPTS WYMQL+GSQVH+WKDLADSFLKQY YNIDM PD LDL
Sbjct: 181 HDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQYNYNIDMTPDRLDL 237

[Close]

BLAST of PI0006481 vs. NCBI nr
Match: XP_008452348.1 (PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo] >KAA0060506.1 Gag-pro-like protein [Cucumis melo var. makuwa] >TYK00746.1 Gag-pro-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 255.0 bits (650), Expect = 5.2e-64
Identity = 143/244 (58.61%), Postives = 158/244 (64.75%), Query Frame = 0


Query: 1   MDEQTNDRVQA------------AKVLWLLTTG------------NKNIDLLLKGRLGHA 60
           MDEQTND+VQA            AK+L LLTTG              +++ +L+  L + 
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  RRI-------------GHPTSFPVQNPNLISQQTAHVSDSISTP------------GSRK 120
                            +PTSFP  NPN  +QQ AHVSD ISTP            GSRK
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120

Query: 121 ILEFLEERLCAIEGACM-RGIDAMQLCLISDVVIPPEFKTPNFEKYNGTTCP-IHLSMYC 180
            LEFLEERLC IEG  M   IDA QLCLISDVVIP +FK P+FEKYNGTTCP  HL MYC
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLIHCFQDNLVGPTSPWYMQLEGSQVHKWKDLADSFLKQYKYNIDMAPD 194
           RKMS YAHDDKLLIH FQD+LVGP S WYMQ +GSQVH+W DLADSFLKQYKYNIDMAPD
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQYKYNIDMAPD 240

The following BLAST results are available for this feature:

BLAST of PI0006481 vs.


Match Name	E-value	Identity	Description

BLAST of PI0006481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V681	1.0e-65	59.84	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7VAU5	3.9e-65	59.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7T401	3.9e-65	60.34	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S4E534	3.9e-65	60.34	uncharacterized protein LOC103502838 OS=Cucumis melo OX=3656 GN=LOC103502838 PE=...	[more]
A0A5A7V1Y8	2.5e-64	58.61	Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420...	[more]

BLAST of PI0006481 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061241.1	2.1e-65	59.84	uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]	[more]
KAA0065293.1	8.1e-65	59.43	uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]	[more]
XP_016903339.1	8.1e-65	60.34	PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]	[more]
KAA0037703.1	8.1e-65	60.34	uncharacterized protein E6C27_scaffold1593G00270 [Cucumis melo var. makuwa]	[more]
XP_008452348.1	5.2e-64	58.61	PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo] >KAA0060506.1 Gag...	[more]

BLAST of PI0006481 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006481.1	PI0006481.1	mRNA