PI0006470 (gene) Melon (PI 482460) v1

Overview
NamePI0006470
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR13
Locationchr05: 22036172 .. 22036913 (-)
RNA-Seq ExpressionPI0006470
SyntenyPI0006470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTGTTTCTCTCTCTCTAGGGTTTTGTGGGTTTTTGAACTTCAATCCTTCTCTTTAATGGCTATCTTCCTAAATTCTCTGAAACCCTTTTCTTTTTAGAACAAATCCTTTCTAAAGCTTAAATCTTTCGCATAAACCCCTCTGTTTTCCTTCTTACTTAAATTCCTCTGTTTTCCTTCAAAAATGGCGCCTTCAGGAGCAAGAATGGCTACAAGAACAAGAAGAACTTTACCCAACTTGAAGCTAACCAAGAAAATCAAGAAAACGACGAAGAAACAACCGCCGCAGAAGACGGAGATTCCAGCCGCCGTCACACAAAACGACGTCGTTGAATTTGGCGACGAGTGTTCCGACGGCGGTTGCAGTACTCCAAAAGCAGAGAGACATAGAATCCCAGAGATTCTGACGTGTCCACCGGCGCCGAAGAAACCAAGAGCCGTTTCCGATTGCTCATTCCGACGATCACCTATTGCCTTTTTTGCCCCTCCAGAATTAGAACTCTTCTTCTTTGTTGCCTTGCCGGTGCCGGACATTTCAGTCTGAAGATTAAAAAAAAAAAAAATCGTGTGTTTATACAAATTTTTACAGACATATGAATGAATCAATCATCAAGTTGTTAATTTTTCTCATCTTTTTTTTGTTAGATATTAGTTTGAATAAGTTTGTGTTTTCTTTTGGTGTGAGATTTTGCAATTAGGTTTGCTGTGTAATATTAATATTATAATATAATTTTGATTTTGGG

mRNA sequence

CTCTGTTTCTCTCTCTCTAGGGTTTTGTGGGTTTTTGAACTTCAATCCTTCTCTTTAATGGCTATCTTCCTAAATTCTCTGAAACCCTTTTCTTTTTAGAACAAATCCTTTCTAAAGCTTAAATCTTTCGCATAAACCCCTCTGTTTTCCTTCTTACTTAAATTCCTCTGTTTTCCTTCAAAAATGGCGCCTTCAGGAGCAAGAATGGCTACAAGAACAAGAAGAACTTTACCCAACTTGAAGCTAACCAAGAAAATCAAGAAAACGACGAAGAAACAACCGCCGCAGAAGACGGAGATTCCAGCCGCCGTCACACAAAACGACGTCGTTGAATTTGGCGACGAGTGTTCCGACGGCGGTTGCAGTACTCCAAAAGCAGAGAGACATAGAATCCCAGAGATTCTGACGTGTCCACCGGCGCCGAAGAAACCAAGAGCCGTTTCCGATTGCTCATTCCGACGATCACCTATTGCCTTTTTTGCCCCTCCAGAATTAGAACTCTTCTTCTTTGTTGCCTTGCCGGTGCCGGACATTTCAGTCTGAAGATTAAAAAAAAAAAAAATCGTGTGTTTATACAAATTTTTACAGACATATGAATGAATCAATCATCAAGTTGTTAATTTTTCTCATCTTTTTTTTGTTAGATATTAGTTTGAATAAGTTTGTGTTTTCTTTTGGTGTGAGATTTTGCAATTAGGTTTGCTGTGTAATATTAATATTATAATATAATTTTGATTTTGGG

Coding sequence (CDS)

ATGGCGCCTTCAGGAGCAAGAATGGCTACAAGAACAAGAAGAACTTTACCCAACTTGAAGCTAACCAAGAAAATCAAGAAAACGACGAAGAAACAACCGCCGCAGAAGACGGAGATTCCAGCCGCCGTCACACAAAACGACGTCGTTGAATTTGGCGACGAGTGTTCCGACGGCGGTTGCAGTACTCCAAAAGCAGAGAGACATAGAATCCCAGAGATTCTGACGTGTCCACCGGCGCCGAAGAAACCAAGAGCCGTTTCCGATTGCTCATTCCGACGATCACCTATTGCCTTTTTTGCCCCTCCAGAATTAGAACTCTTCTTCTTTGTTGCCTTGCCGGTGCCGGACATTTCAGTCTGA

Protein sequence

MAPSGARMATRTRRTLPNLKLTKKIKKTTKKQPPQKTEIPAAVTQNDVVEFGDECSDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV
Homology
[Close]
BLAST of PI0006470 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.4e-14
Identity = 52/113 (46.02%), Postives = 60/113 (53.10%), Query Frame = 0 

Query: 8   MATRTRRTLPNLKLTKKIKKTTKKQPPQKTEI------------PAAVTQNDVVEFGDEC 67
           MA++  R  PN    K  +   KKQ PQ   I            PAAV            
Sbjct: 1   MASKKARK-PNRAEKKLTRSCFKKQVPQHNNINTNTIYSVPSPSPAAVL----------T 60

Query: 68  SDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFF 109
           S GGC TPKA++ RIPE+LTCPPAPKK R   +C  RR  I FFAPPE+ELFF
Sbjct: 61  SPGGCCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]
BLAST of PI0006470 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.3e-11
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 0 

Query: 8   MATRTRRTLPNLKLTKKIKKTTKKQPPQKTEIPAAVTQNDVVEFGDE--------CSDGG 67
           MA++ ++ L     T++ K++  K P     I + VT                   ++ G
Sbjct: 1   MASKGKKPL-RRTTTRRRKRSHFKNPSPPCSINSDVTSTSSTSTSPTSTATPSPVSAESG 60

Query: 68  CSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVAL 113
           C TP  E+ RIPE+LTCPPAPKK +   +C+ RR  IAFFAPP++ELFF  AL
Sbjct: 61  CCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]
BLAST of PI0006470 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.9e-04
Identity = 22/48 (45.83%), Postives = 30/48 (62.50%), Query Frame = 0 

Query: 61  STPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFF 109
           +TP A+  RIP ++ CPPAPKK +     S+   P  FF+PP+LE  F
Sbjct: 56  TTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREFFSPPDLETVF 101

[Close]
BLAST of PI0006470 vs. ExPASy TrEMBL
Match: A0A0A0L0Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291940 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.8e-53
Identity = 113/121 (93.39%), Postives = 114/121 (94.21%), Query Frame = 0 

Query: 1   MAPSGARMATR-TRRTLPNLKLTKKIKKTT-KKQPPQKTEIPAAVTQNDVVEFGDECSDG 60
           MAPSGARMATR TRR LPNLKLTKKIKKTT KKQPPQK EIP  VTQND+VEFGDECSDG
Sbjct: 1   MAPSGARMATRTTRRALPNLKLTKKIKKTTNKKQPPQKIEIPVPVTQNDIVEFGDECSDG 60

Query: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDIS 120
           GCSTPKAERHRIPEILTCPPAPKKPRAVSDCS RRSPIAFFAPPELELFFFVALPVPDIS
Sbjct: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSLRRSPIAFFAPPELELFFFVALPVPDIS 120

[Close]
BLAST of PI0006470 vs. ExPASy TrEMBL
Match: A0A6J1JET4 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=LOC111484378 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.6e-38
Identity = 92/123 (74.80%), Postives = 98/123 (79.67%), Query Frame = 0 

Query: 1   MAPSGARMATRTRRTLPNLKLTKKIKKTTKKQPPQKTEIP--AAVTQNDVVEFGDECS-- 60
           MAPSG +MATRTR  LPNLKL KKIKKT K+Q  Q+ ++    AV  ND V F D+CS  
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPAVIPNDAVHFTDDCSDI 60

Query: 61  DGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPD 120
           DGGCSTPKAER RIPEILTCPPAPKKPR  SDCS RRSPIAFFAPPELEL FF ALPVPD
Sbjct: 61  DGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELEL-FFCALPVPD 120

[Close]
BLAST of PI0006470 vs. ExPASy TrEMBL
Match: A0A6J1FTJ6 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN=LOC111448665 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.1e-36
Identity = 91/124 (73.39%), Postives = 99/124 (79.84%), Query Frame = 0 

Query: 1   MAPSGARMATRTRRTLPNLKLTKKIKKTTKKQPPQK---TEIPAAVTQNDVVEFGDECS- 60
           MAPSG +MATRTR  LPNLKL KKIKKT K+Q  Q+    +IPAA+  ND V F D+ + 
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPAAI-PNDAVHFTDDSTD 60

Query: 61  -DGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVP 120
            DGGCSTPKAER RIP+ILTCPPAPKKPR  SDCS RRSPIAFFAPPELEL FF ALPVP
Sbjct: 61  IDGGCSTPKAERFRIPDILTCPPAPKKPRPSSDCSLRRSPIAFFAPPELEL-FFCALPVP 120

[Close]
BLAST of PI0006470 vs. ExPASy TrEMBL
Match: A0A6J1H2X7 (cyclin-dependent protein kinase inhibitor SMR13-like OS=Cucurbita moschata OX=3662 GN=LOC111459621 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32
Identity = 82/119 (68.91%), Postives = 91/119 (76.47%), Query Frame = 0 

Query: 1   MAPSGARMATRTRRTLPNLKLTKKIKKTTKKQPPQKTEIPAAVTQNDVVEFGDECSDGGC 60
           MAPSGA+MATR RR +   K+ KKIKKTT K+P  +   P    QNDVV+F D+   GG 
Sbjct: 1   MAPSGAKMATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPP----QNDVVQFPDDDGGGGY 60

Query: 61  STPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV 120
           STPKAER RIPEILTCPP PKK R +SDCSFRRSPIAFFAPPELELFFF+A   PDISV
Sbjct: 61  STPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIAR--PDISV 113

[Close]
BLAST of PI0006470 vs. ExPASy TrEMBL
Match: A0A6J1D3Z6 (cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3673 GN=LOC111017372 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.5e-32
Identity = 82/113 (72.57%), Postives = 91/113 (80.53%), Query Frame = 0 

Query: 1   MAPSGARMATRTRRTLPNLKLTKKIKKTTKKQPPQKTEIPAAVTQNDVVEFGDECSDGGC 60
           MAPSG RMA RTR    +LKL KK+KK TKKQ  QK  +PA  T+NDVV+  ++  DGGC
Sbjct: 1   MAPSGGRMAARTRGNSQSLKL-KKMKK-TKKQQQQK--LPAPATENDVVQCSNDDIDGGC 60

Query: 61  STPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALP 114
           STP+AER RIPEI+TCPPAPKK R VSDCSFRRSPIAFFAPPELELFFF ALP
Sbjct: 61  STPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALP 109

[Close]
BLAST of PI0006470 vs. NCBI nr
Match: XP_011653594.1 (cyclin-dependent protein kinase inhibitor SMR13 [Cucumis sativus] >KGN54182.1 hypothetical protein Csa_018192 [Cucumis sativus])

HSP 1 Score: 217.6 bits (553), Expect = 5.7e-53
Identity = 113/121 (93.39%), Postives = 114/121 (94.21%), Query Frame = 0 

Query: 1   MAPSGARMATR-TRRTLPNLKLTKKIKKTT-KKQPPQKTEIPAAVTQNDVVEFGDECSDG 60
           MAPSGARMATR TRR LPNLKLTKKIKKTT KKQPPQK EIP  VTQND+VEFGDECSDG
Sbjct: 1   MAPSGARMATRTTRRALPNLKLTKKIKKTTNKKQPPQKIEIPVPVTQNDIVEFGDECSDG 60

Query: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDIS 120
           GCSTPKAERHRIPEILTCPPAPKKPRAVSDCS RRSPIAFFAPPELELFFFVALPVPDIS
Sbjct: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSLRRSPIAFFAPPELELFFFVALPVPDIS 120

[Close]
BLAST of PI0006470 vs. NCBI nr
Match: XP_038902266.1 (cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida])

HSP 1 Score: 184.9 bits (468), Expect = 4.1e-43
Identity = 98/114 (85.96%), Postives = 104/114 (91.23%), Query Frame = 0 

Query: 8   MATRTRRTLPNLKLTKKIKKTTKKQPPQKTEIPAAVTQNDVVEFGDECS--DGGCSTPKA 67
           MATRTRR LPNLKLTKKIKKT K+Q  Q+ +IPA V QND+V+F DECS  DGGCSTPKA
Sbjct: 1   MATRTRRNLPNLKLTKKIKKTKKQQ--QQNQIPATV-QNDIVQFTDECSDTDGGCSTPKA 60

Query: 68  ERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDISV 120
           ERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFV+LPVPDISV
Sbjct: 61  ERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVSLPVPDISV 111

[Close]
BLAST of PI0006470 vs. NCBI nr
Match: XP_022986710.1 (cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima])

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-37
Identity = 92/123 (74.80%), Postives = 98/123 (79.67%), Query Frame = 0 

Query: 1   MAPSGARMATRTRRTLPNLKLTKKIKKTTKKQPPQKTEIP--AAVTQNDVVEFGDECS-- 60
           MAPSG +MATRTR  LPNLKL KKIKKT K+Q  Q+ ++    AV  ND V F D+CS  
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPAVIPNDAVHFTDDCSDI 60

Query: 61  DGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPD 120
           DGGCSTPKAER RIPEILTCPPAPKKPR  SDCS RRSPIAFFAPPELEL FF ALPVPD
Sbjct: 61  DGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELEL-FFCALPVPD 120

[Close]
BLAST of PI0006470 vs. NCBI nr
Match: KAG7010272.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 165.6 bits (418), Expect = 2.6e-37
Identity = 91/121 (75.21%), Postives = 98/121 (80.99%), Query Frame = 0 

Query: 1   MAPSGARMATRTRRTLPNLKLTKKIKKTTKKQPPQKTEIPAAVTQNDVVEFGDECS--DG 60
           MAPSG +MATRTR  LPNLKL KKIKKT K+Q  +  +IPAA+  ND V F D+ +  DG
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQKLKQIPAAI-PNDAVHFTDDSTDIDG 60

Query: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDIS 120
           GCSTPKAER RIPEILTCPPAPKKPR  SDCS RRSPIAFFAPPELEL FF ALPVPDIS
Sbjct: 61  GCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELEL-FFCALPVPDIS 119

[Close]
BLAST of PI0006470 vs. NCBI nr
Match: XP_023522908.1 (cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.2 bits (417), Expect = 3.4e-37
Identity = 91/121 (75.21%), Postives = 96/121 (79.34%), Query Frame = 0 

Query: 1   MAPSGARMATRTRRTLPNLKLTKKIKKTTKKQPPQKTEIPAAVTQNDVVEFGDECS--DG 60
           MAPSG +MATRTR  LPNLKL KKIKKT K+Q  QK +   AV  ND V F D+ +  DG
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQKLKQIPAVILNDAVHFTDDSTDIDG 60

Query: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVALPVPDIS 120
           GCSTPKAER RIPEILTCPPAPKKPR  SDCS RRSPIAFFAPPELEL FF ALPVPDIS
Sbjct: 61  GCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELEL-FFCALPVPDIS 120

[Close]
BLAST of PI0006470 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 3.9e-15
Identity = 52/113 (46.02%), Postives = 60/113 (53.10%), Query Frame = 0 

Query: 8   MATRTRRTLPNLKLTKKIKKTTKKQPPQKTEI------------PAAVTQNDVVEFGDEC 67
           MA++  R  PN    K  +   KKQ PQ   I            PAAV            
Sbjct: 1   MASKKARK-PNRAEKKLTRSCFKKQVPQHNNINTNTIYSVPSPSPAAVL----------T 60

Query: 68  SDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFF 109
           S GGC TPKA++ RIPE+LTCPPAPKK R   +C  RR  I FFAPPE+ELFF
Sbjct: 61  SPGGCCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]
BLAST of PI0006470 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 0 

Query: 8   MATRTRRTLPNLKLTKKIKKTTKKQPPQKTEIPAAVTQNDVVEFGDE--------CSDGG 67
           MA++ ++ L     T++ K++  K P     I + VT                   ++ G
Sbjct: 1   MASKGKKPL-RRTTTRRRKRSHFKNPSPPCSINSDVTSTSSTSTSPTSTATPSPVSAESG 60

Query: 68  CSTPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVAL 113
           C TP  E+ RIPE+LTCPPAPKK +   +C+ RR  IAFFAPP++ELFF  AL
Sbjct: 61  CCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]
BLAST of PI0006470 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05
Identity = 22/48 (45.83%), Postives = 30/48 (62.50%), Query Frame = 0 

Query: 61  STPKAERHRIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFF 109
           +TP A+  RIP ++ CPPAPKK +     S+   P  FF+PP+LE  F
Sbjct: 56  TTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREFFSPPDLETVF 101

[Close]
BLAST of PI0006470 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 1.4e-04
Identity = 35/95 (36.84%), Postives = 51/95 (53.68%), Query Frame = 0 

Query: 18  NLKLTKKIKKTTKKQPPQ-KTEIPAAVTQNDVVEFGDECSDGGCSTPKAERHRIPEILTC 77
           +++ + K  KT  + PP+  TE+     + D     +ECS    +TP A+  +IPE+L C
Sbjct: 26  SIRASLKPVKTKLRAPPEIVTEV-----EEDCYNEEEECS----TTPTAKETKIPELLEC 85

Query: 78  PPAPKKPRAVSDCSFRRSPIA--FFAPP-ELELFF 109
           PPAP+K R    C   RS +   FF PP +LE  F
Sbjct: 86  PPAPRKRRPALKC---RSNVVREFFTPPSDLETVF 108

[Close]
BLAST of PI0006470 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 4.0e-04
Identity = 26/78 (33.33%), Postives = 39/78 (50.00%), Query Frame = 0 

Query: 31  KQPPQKTEIPAAVTQNDVVEFGDECSDGGCSTPKAERHRIPEILTCPPAPKKPRAVSDCS 90
           + P ++  +   VT  +  E  D+C     +TP A   RIP +  CP APKK +    CS
Sbjct: 32  RSPLKQINLSPGVTVTETEE-QDQCP----TTPTAVSVRIPRVPPCPAAPKKRKPSLKCS 91

Query: 91  FRRSPIAFFAPPELELFF 109
           +      +F+PP+LE  F
Sbjct: 92  YVTVTRDYFSPPDLETVF 104

The following BLAST results are available for this feature:
BLAST of PI0006470 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4IWB35.4e-1446.02Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ... [more]
Q3ECS54.3e-1138.94Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G... [more]
Q1G3Y43.9e-0445.83Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of PI0006470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0Q12.8e-5393.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291940 PE=4 SV=1[more]
A0A6J1JET45.6e-3874.80cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FTJ63.1e-3673.39cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1H2X71.2e-3268.91cyclin-dependent protein kinase inhibitor SMR13-like OS=Cucurbita moschata OX=36... [more]
A0A6J1D3Z63.5e-3272.57cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3... [more]
BLAST of PI0006470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653594.15.7e-5393.39cyclin-dependent protein kinase inhibitor SMR13 [Cucumis sativus] >KGN54182.1 hy... [more]
XP_038902266.14.1e-4385.96cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida][more]
XP_022986710.11.2e-3774.80cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima][more]
KAG7010272.12.6e-3775.21Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma... [more]
XP_023522908.13.4e-3775.21cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo... [more]
BLAST of PI0006470 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G20898.13.9e-1546.02unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G51355.13.1e-1238.94unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G60783.12.8e-0545.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G40460.11.4e-0436.84unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G10690.14.0e-0433.33unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33142:SF8CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13coord: 18..112
IPR040389Cyclin-dependent protein kinase inhibitor SMRPANTHERPTHR33142CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13coord: 18..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0006470.1PI0006470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045839 negative regulation of mitotic nuclear division
biological_process GO:0032875 regulation of DNA endoreduplication
cellular_component GO:0005634 nucleus