PI0006352 (gene) Melon (PI 482460) v1

Overview


Name	PI0006352
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Stress response protein NST1-like
Location	chr06: 15803220 .. 15803711 (+)
RNA-Seq Expression	PI0006352
Synteny	PI0006352

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCACTTGAACAAGGGCCACCGCCTAGAAAGAAAATGGAGGTCGCCGGACCATCCAAAGGGAAAAAGAAGATTGGGAGCTCTGGACCTGAAGAGCACCCATCAGGCAACAAAGCCAAAACGAAAACACCCTCAATCAACTCTCTCATAAAGGTTGAGAAAGGGTTGTTTCCATTTAATGGCCCACTCCCAGACTTCCTCTACGGGCCTATCCAGGCGTTTGGCTGGAAGAAATTCTTCAAAGGGCACACCAAGTTGCGAATGGGTGTTGTGGAAAAATTTTATGCTCCTAAACTCAATGCTGAGGAGTTTAGCGTTGAAATCAGTGGAAAGACACTACAAGAAAAAACATGTACGATAGCTAAAGAAAAAGGCCATAATAGACTTTTGATAGCGTTTTTGGAAGTCCTGACAGCCTATGTTATTAAAAGTCTAAGATTTTTTATAGCGTTCTTCGGAAGCTATAACGAGTGCTATTATAGAGTATGA

mRNA sequence

ATGAGTCCACTTGAACAAGGGCCACCGCCTAGAAAGAAAATGGAGGTCGCCGGACCATCCAAAGGGAAAAAGAAGATTGGGAGCTCTGGACCTGAAGAGCACCCATCAGGCAACAAAGCCAAAACGAAAACACCCTCAATCAACTCTCTCATAAAGGTTGAGAAAGGGTTGTTTCCATTTAATGGCCCACTCCCAGACTTCCTCTACGGGCCTATCCAGGCGTTTGGCTGGAAGAAATTCTTCAAAGGGCACACCAAGTTGCGAATGGGTGTTGTGGAAAAATTTTATGCTCCTAAACTCAATGCTGAGGAGTTTAGCGTTGAAATCAGTGGAAAGACACTACAAGAAAAAACATGTACGATAGCTAAAGAAAAAGGCCATAATAGACTTTTGATAGCGTTTTTGGAAGTCCTGACAGCCTATGTTATTAAAAGTCTAAGATTTTTTATAGCGTTCTTCGGAAGCTATAACGAGTGCTATTATAGAGTATGA

Coding sequence (CDS)

ATGAGTCCACTTGAACAAGGGCCACCGCCTAGAAAGAAAATGGAGGTCGCCGGACCATCCAAAGGGAAAAAGAAGATTGGGAGCTCTGGACCTGAAGAGCACCCATCAGGCAACAAAGCCAAAACGAAAACACCCTCAATCAACTCTCTCATAAAGGTTGAGAAAGGGTTGTTTCCATTTAATGGCCCACTCCCAGACTTCCTCTACGGGCCTATCCAGGCGTTTGGCTGGAAGAAATTCTTCAAAGGGCACACCAAGTTGCGAATGGGTGTTGTGGAAAAATTTTATGCTCCTAAACTCAATGCTGAGGAGTTTAGCGTTGAAATCAGTGGAAAGACACTACAAGAAAAAACATGTACGATAGCTAAAGAAAAAGGCCATAATAGACTTTTGATAGCGTTTTTGGAAGTCCTGACAGCCTATGTTATTAAAAGTCTAAGATTTTTTATAGCGTTCTTCGGAAGCTATAACGAGTGCTATTATAGAGTATGA

Protein sequence

MSPLEQGPPPRKKMEVAGPSKGKKKIGSSGPEEHPSGNKAKTKTPSINSLIKVEKGLFPFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAEEFSVEISGKTLQEKTCTIAKEKGHNRLLIAFLEVLTAYVIKSLRFFIAFFGSYNECYYRV

Homology

[Close]

BLAST of PI0006352 vs. ExPASy TrEMBL
Match: A0A5D3CEC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00090 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.7e-11
Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 44  TPSINSLIKVEKGLFPFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAE 103
           T  ++ LIK+EKGL PFN  LPDFLYGPI+A  W+KFF G  K+R+ +++ FYA K + +
Sbjct: 3   TQYMDKLIKIEKGLLPFNSHLPDFLYGPIKALKWEKFFTGEMKVRLDIIDMFYATKYHLD 62

Query: 104 E 105
           E
Sbjct: 63  E 63

[Close]

BLAST of PI0006352 vs. ExPASy TrEMBL
Match: A0A5A7TBU7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold279G00120 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.6e-11
Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 1   MSPLEQGPPPRKK----MEVAGPSKGKKKIGSSGPEEHPSGNKAKTKTPSINSLIKVEKG 60
           MSPL   P P +K    +E    SK K+K G+S P++   GNK   +   ++ LIK+EKG
Sbjct: 209 MSPLGPRPRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGNKMSAQ--KLDKLIKIEKG 268

Query: 61  LFPFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAEEFSVEISGK 113
           L PFN PL +FLYG I+    +KFF   TK+++ +V+ FY  K +  E  + + G+
Sbjct: 269 LLPFNDPLLNFLYGLIKTMKLEKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGE 322

[Close]

BLAST of PI0006352 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.6e-11
Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 1   MSPLEQGPPPRKK----MEVAGPSKGKKKIGSSGPEEHPSGNKAKTKTPSINSLIKVEKG 60
           MSPL   P P +K    +E    SK K+K G+S P++   GNK   +   ++ LIK+EKG
Sbjct: 178 MSPLGPRPRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGNKMSAQ--KLDKLIKIEKG 237

Query: 61  LFPFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAEEFSVEISGK 113
           L PFN PL +FLYG I+    +KFF   TK+++ +V+ FY  K +  E  + + G+
Sbjct: 238 LLPFNDPLLNFLYGLIKTMKLEKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGE 291

[Close]

BLAST of PI0006352 vs. ExPASy TrEMBL
Match: A0A0A0LT82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169970 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 8.8e-10
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 47  INSLIKVEKGLFPFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAEE 105
           ++ LIK+EKGL  FNG LPDFLY PI+A  W+KFF   TK++  VV+ FYA K + +E
Sbjct: 6   LDRLIKIEKGLLSFNGSLPDFLYAPIKALKWEKFFTDETKVKFDVVDLFYATKFHPKE 63

[Close]

BLAST of PI0006352 vs. ExPASy TrEMBL
Match: A0A5A7VMD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00650 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.2e-09
Identity = 44/116 (37.93%), Postives = 65/116 (56.03%), Query Frame = 0


Query: 1   MSPLEQGPPPRKK--MEVAGPSKGKKKIGSSGPEEHPSGNKAKTKTPSINSLIKVEKGLF 60
           MS LE    P ++  ++   P K K K+ +S  E+  +      +   ++ L+K+EKGLF
Sbjct: 1   MSHLESRLRPEEQGLVDTTRPKKDKNKVRTSRSEDVQTSEPLNDQ--KLDKLLKIEKGLF 60

Query: 61  PFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAEEFSVEISGKTL 115
            F+G L DFLY PI+AF W+KFF+G  K+R+ VV  FY  K    E    + GK +
Sbjct: 61  LFSGHLLDFLYEPIKAFKWEKFFRGDAKVRLDVVNMFYTVKYYQVESYATVEGKKI 114

[Close]

BLAST of PI0006352 vs. NCBI nr
Match: KAA0065467.1 (hypothetical protein E6C27_scaffold17G001620 [Cucumis melo var. makuwa] >TYK08709.1 hypothetical protein E5676_scaffold76G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 5.7e-11
Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 0


Query: 44  TPSINSLIKVEKGLFPFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAE 103
           T  ++ LIK+EKGL PFN  LPDFLYGPI+A  W+KFF G  K+R+ +++ FYA K + +
Sbjct: 3   TQYMDKLIKIEKGLLPFNSHLPDFLYGPIKALKWEKFFTGEMKVRLDIIDMFYATKYHLD 62

Query: 104 E 105
           E
Sbjct: 63  E 63

[Close]

BLAST of PI0006352 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 7.4e-11
Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 1   MSPLEQGPPPRKK----MEVAGPSKGKKKIGSSGPEEHPSGNKAKTKTPSINSLIKVEKG 60
           MSPL   P P +K    +E    SK K+K G+S P++   GNK   +   ++ LIK+EKG
Sbjct: 178 MSPLGPRPRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGNKMSAQ--KLDKLIKIEKG 237

Query: 61  LFPFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAEEFSVEISGK 113
           L PFN PL +FLYG I+    +KFF   TK+++ +V+ FY  K +  E  + + G+
Sbjct: 238 LLPFNDPLLNFLYGLIKTMKLEKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGE 291

[Close]

BLAST of PI0006352 vs. NCBI nr
Match: KAA0038829.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 7.4e-11
Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 1   MSPLEQGPPPRKK----MEVAGPSKGKKKIGSSGPEEHPSGNKAKTKTPSINSLIKVEKG 60
           MSPL   P P +K    +E    SK K+K G+S P++   GNK   +   ++ LIK+EKG
Sbjct: 209 MSPLGPRPRPEEKGLTNIEFPKKSKSKRKAGTSRPKDIQRGNKMSAQ--KLDKLIKIEKG 268

Query: 61  LFPFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAEEFSVEISGK 113
           L PFN PL +FLYG I+    +KFF   TK+++ +V+ FY  K +  E  + + G+
Sbjct: 269 LLPFNDPLLNFLYGLIKTMKLEKFFIEETKVKLDIVDMFYVAKFHLNESYMIVEGE 322

[Close]

BLAST of PI0006352 vs. NCBI nr
Match: KAE8645907.1 (hypothetical protein Csa_023734, partial [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 4.8e-10
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 51  IKVEKGLFPFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAEEFSVEIS 110
           IK+EKGL PF  PL DFLY PI+AF WKKFF   T++R+ +V+ FYA K + +E  V + 
Sbjct: 5   IKIEKGLLPFKDPLLDFLYDPIKAFKWKKFFVSETQIRLDLVDMFYAAKFHPQESYVVVK 64

Query: 111 GK 113
           G+
Sbjct: 65  GE 66

[Close]

BLAST of PI0006352 vs. NCBI nr
Match: KGN64973.1 (hypothetical protein Csa_022771 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-09
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 47  INSLIKVEKGLFPFNGPLPDFLYGPIQAFGWKKFFKGHTKLRMGVVEKFYAPKLNAEE 105
           ++ LIK+EKGL  FNG LPDFLY PI+A  W+KFF   TK++  VV+ FYA K + +E
Sbjct: 6   LDRLIKIEKGLLSFNGSLPDFLYAPIKALKWEKFFTDETKVKFDVVDLFYATKFHPKE 63

The following BLAST results are available for this feature:

BLAST of PI0006352 vs.


Match Name	E-value	Identity	Description

BLAST of PI0006352 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CEC7	2.7e-11	54.10	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TBU7	3.6e-11	39.66	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3DQE7	3.6e-11	39.66	Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LT82	8.8e-10	55.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G169970 PE=4 SV=1	[more]
A0A5A7VMD3	1.2e-09	37.93	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0006352 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065467.1	5.7e-11	54.10	hypothetical protein E6C27_scaffold17G001620 [Cucumis melo var. makuwa] >TYK0870...	[more]
TYK25768.1	7.4e-11	39.66	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAA0038829.1	7.4e-11	39.66	stress response protein NST1-like [Cucumis melo var. makuwa]	[more]
KAE8645907.1	4.8e-10	53.23	hypothetical protein Csa_023734, partial [Cucumis sativus]	[more]
KGN64973.1	1.8e-09	55.17	hypothetical protein Csa_022771 [Cucumis sativus]	[more]

BLAST of PI0006352 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006352.1	PI0006352.1	mRNA