
PI0006304 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCGTTGTCGAGGAGCGACGGTAAGTTTTTCTAAATTCTTTTTAGGTTTAAACTTTCCTTTTTAGCTTCTTGATTCTATATTCAATTTCTAAAAAAAAATCTTTAAAACCAAAAAGAGAAAGTTATTTGATATTCTTTTTCTCTCCCCTACCTTGCATGTCCCGTTCTTCCAATCCTCAATTACATTTCTTCGAAGACCTCAATAGGGAAGTGCGTAGGATTAGGAGAGAAAGGAGAGGAGAAAATAACCAAAATATTCCTTAAGAACCTTTAGACAACCAAGAGCCTATCTTAGAGAACCAAAACCTTGATAGAGAAACCATGGGCCAAGTTAGAGAGAAAACCTTAAGAGAGCTTTCTGAGCCTAACGAAGACCAAAGGCCCCTCTGTGTAGTTATTCCCCCAACAACTCAACCCTTCGAACTAAAACCTGGACTAATCCACCTCTTACCTATATACAAGGGTAGTTCAGGAGAGGACCCCCATAAACACCTCAAAGACTTTCATATGGTTTGTGACTCAATGAGACCCCACAGAGTTTCAAAGGAACAGCTTAACTTGAGAGCCTTCCCTTTTTCTTTAACCGACACAGCCAAAAGATGGCTTTACTACCTAGAGCCAGGGTCCATAACCACTTAGGGAGGCCTTAAAAAGAAATTCCTAGAAAAATTATTTTCTGCTTCTAGAGCTAATAATATTAGTAAGGAAATCTACGGAATTAGGCAAGCTTTTGGGGAGTCATTGTCAGAATACTGGGAGCGATTTAAGGAACTCTGTGCTAGCTTCCCCCATCATCATATTTCTGATCCTTCACTTATACAGTATTTTTATTCTAGACTACTAACCACGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCTTTAGTTGATAAGACCCCTACTGAAGCCAGAGAGCTCATTTCAAGGATGGCTGAGAATTCACAGAATTTTGGCAACAAAGCATCCGAGCTCGACAATTGATTGACAAAGGAGGTAAGTGAACTCAAATCACAAATGCTTAATATGACTACCTTACTTACTTCTTTTGTGCAAGGTGGATCTGTAAAAGTTGCAAAATGTGGGGTGTGCGGTCTAGTTGGGCATCCTAATGACAAGTGTCCTGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCCCATAGTAACACTTACAACGCCGGTTGGAGAGACAACCTTAATCTTAGATGGGGAAACGACAGCCAAAGACCCGCGCAAGCAACTTCATCTTCAAATAATCAAGGTACTAATTTGGAAGACTTAGTTAAAGCTCTTGCTACTAATACAATCTCTTTTCAGAACGAAATGAAACAACAAATATCTCAACTAACAAATGCCATAAGCAAGCTAGAAGGCAAAGGCAAGCTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGTCATTTCGCTTAGAAGCGGTAAGACTCTGGAAACCCCTTCAAGCGAAGAAAAGGTAACTTCTATCCCTGACCTTCTAGAAGATAAAAATGAGAAAAAGGAAGAAAAATTAGAAACAAGTACTCAACCATCTTCTTCAAAAGGTAAAAATCACATTCTTGATTATTCTCCATATGTCCCTAATGCTCCTTTTCCTTCCAGGTTAGCCCCTAAAAAGAAAGAATCACCGAAGGAAGAAGAACTTTTGGAGATGTTCAGAAAGGTGCAGATAAACTTGCCTCTACTTGATGCGATTCAACAAGTCCCGAGGTATGCGAAGTTCTTAAAAGAATTATACACCAACAAGAGAAAAATCAAAGAAAAGCCGATGGTAAGTCACAACGTTTTTGCACTTCTTAAGACTTCTGTACCTGCAAAACAAAACGATCCAGGTATGTTTTCTTTTCCTTGTATTATAGGAAATAGACCAATTTCTAATGCAATGCTTGACTTAGGAGCCTCTATCAATCTCATGCCATATTCTGTTTTTAAAGATCTAGAATTAAATAACTTGCAAAAAACAAATGTATGCATTCAACTTGCTGATAGATCTTTCATATCACCGCTTGGAATAGTCGAAGATGTACTTGTTAAAGTAGATAAGCTAATACTTCCTGCGGACTTTTATATTCTAGAAATGAATAATGCATGCTCTAAACCCTCCCATTCAATTCTACTAGGAAGACCTTTCCTCAAGACTGCTAAAGCTATCATCGATGTAGCTAAAGGTTGTCTTAGTGTAGAATTCGATGGAGACGTCGTGACATTTAATATTTTTGAATCCATGAAATATCCTGAAGAATGCCTTTCCTTATGCTCCTTAGAGTTGCATGATGAATTTGATCAATTGCCTATGAATAATGAATTTGCTAAACAAGAGTTAG ATGGCGCCGTTGTCGAGGAGCGACGGTGGATCTGTAAAAGTTGCAAAATGTGGGGTGTGCGGTCTAGTTGGGCATCCTAATGACAAGTGTCCTGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCCCATAGTAACACTTACAACGCCGGTTGGAGAGACAACCTTAATCTTAGATGGGGAAACGACAGCCAAAGACCCGCGCAAGCAACTTCATCTTCAAATAATCAAGGTACTAATTTGGAAGACTTAGTTAAAGCTCTTGCTACTAATACAATCTCTTTTCAGAACGAAATGAAACAACAAATATCTCAACTAACAAATGCCATAAGCAAGCTAGAAGGCAAAGGCAAGCTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGTCATTTCGCTTAGAAGCGGTAAGACTCTGGAAACCCCTTCAAGCGAAGAAAAGAGTTAG ATGGCGCCGTTGTCGAGGAGCGACGGTGGATCTGTAAAAGTTGCAAAATGTGGGGTGTGCGGTCTAGTTGGGCATCCTAATGACAAGTGTCCTGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCCCATAGTAACACTTACAACGCCGGTTGGAGAGACAACCTTAATCTTAGATGGGGAAACGACAGCCAAAGACCCGCGCAAGCAACTTCATCTTCAAATAATCAAGGTACTAATTTGGAAGACTTAGTTAAAGCTCTTGCTACTAATACAATCTCTTTTCAGAACGAAATGAAACAACAAATATCTCAACTAACAAATGCCATAAGCAAGCTAGAAGGCAAAGGCAAGCTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGTCATTTCGCTTAGAAGCGGTAAGACTCTGGAAACCCCTTCAAGCGAAGAAAAGAGTTAG MAPLSRSDGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNLNLRWGNDSQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQISQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKTLETPSSEEKS Homology
BLAST of PI0006304 vs. ExPASy TrEMBL
Match: A0A5D3CB46 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00170 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56 Identity = 105/141 (74.47%), Postives = 128/141 (90.78%), Query Frame = 0
BLAST of PI0006304 vs. ExPASy TrEMBL
Match: A0A5D3CFE7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00840 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.4e-54 Identity = 102/141 (72.34%), Postives = 122/141 (86.52%), Query Frame = 0
BLAST of PI0006304 vs. ExPASy TrEMBL
Match: A0A5A7VQ60 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00030 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54 Identity = 102/141 (72.34%), Postives = 127/141 (90.07%), Query Frame = 0
BLAST of PI0006304 vs. ExPASy TrEMBL
Match: A0A5A7V0Q7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00020 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.1e-54 Identity = 102/141 (72.34%), Postives = 125/141 (88.65%), Query Frame = 0
BLAST of PI0006304 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.1e-54 Identity = 101/141 (71.63%), Postives = 126/141 (89.36%), Query Frame = 0
BLAST of PI0006304 vs. NCBI nr
Match: TYK07549.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 229.2 bits (583), Expect = 2.4e-56 Identity = 105/141 (74.47%), Postives = 128/141 (90.78%), Query Frame = 0
BLAST of PI0006304 vs. NCBI nr
Match: TYK10613.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 222.2 bits (565), Expect = 2.9e-54 Identity = 102/141 (72.34%), Postives = 122/141 (86.52%), Query Frame = 0
BLAST of PI0006304 vs. NCBI nr
Match: KAA0067359.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 221.5 bits (563), Expect = 5.0e-54 Identity = 102/141 (72.34%), Postives = 127/141 (90.07%), Query Frame = 0
BLAST of PI0006304 vs. NCBI nr
Match: KAA0061138.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 220.7 bits (561), Expect = 8.5e-54 Identity = 102/141 (72.34%), Postives = 125/141 (88.65%), Query Frame = 0
BLAST of PI0006304 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo]) HSP 1 Score: 220.7 bits (561), Expect = 8.5e-54 Identity = 101/141 (71.63%), Postives = 126/141 (89.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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