PI0006291 (gene) Melon (PI 482460) v1

Overview


Name	PI0006291
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr09: 8043136 .. 8043590 (+)
RNA-Seq Expression	PI0006291
Synteny	PI0006291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCATAGTTCGTGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCCATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACTACGGTAACCCGATCTAAGGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGACCAATCTTGTCTGTCCTTCTGGCGGAGTAACTCAAATGAGGCCTCCTGCCTCTCCTTTATCAAATATGGAGTCATCAACTCCTCCCATAACATATTCTCAGGCCGTCGCTCTAGAAAAATGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTAAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCTAGAATATCAAAGTCTCACTCTCGATGAGACAGTTTCAAAAATCTTCCCTGA

mRNA sequence

ATGAGCATAGTTCGTGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCCATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACTACGGTAACCCGATCTAAGGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGACCAATCTTGTCTGTCCTTCTGGCGGAGTAACTCAAATGAGGCCTCCTGCCTCTCCTTTATCAAATATGGAGTCATCAACTCCTCCCATAACATATTCTCAGGCCGTCGCTCTAGAAAAATGTTTCAAAAATCTTCCCTGA

Coding sequence (CDS)

ATGAGCATAGTTCGTGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCCATGAGTGCAGATCAATATGCAATGGATTTAGGGTTTACTACGGTAACCCGATCTAAGGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGACCAATCTTGTCTGTCCTTCTGGCGGAGTAACTCAAATGAGGCCTCCTGCCTCTCCTTTATCAAATATGGAGTCATCAACTCCTCCCATAACATATTCTCAGGCCGTCGCTCTAGAAAAATGTTTCAAAAATCTTCCCTGA

Protein sequence

MSIVRGRGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEKCFKNLP

Homology

[Close]

BLAST of PI0006291 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.5e-32
Identity = 82/109 (75.23%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 7   RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTP 66
           RGR +STSSKG+R SSS N  PSPMSADQYAMDLGFTTVTRS++RSS IRI SPTESSTP
Sbjct: 9   RGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIGSPTESSTP 68

Query: 67  PRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEKCFKNL 116
           P+PSTNL+ PSGGV QMR P SP SN +SSTPP TYSQAV  +K  K L
Sbjct: 69  PKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRSKLL 117

[Close]

BLAST of PI0006291 vs. ExPASy TrEMBL
Match: A0A5D3CKX1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00620 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.4e-32
Identity = 82/110 (74.55%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 7   RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTP 66
           RGR +STSSKG+R SSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTP
Sbjct: 9   RGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTESPTESSTP 68

Query: 67  PRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEKCFKNLP 117
           PRP  NL+ PSG V QMRPPASP SN ESSTPP TYSQAV  +K F   P
Sbjct: 69  PRPLANLIRPSGRVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRP 118

[Close]

BLAST of PI0006291 vs. ExPASy TrEMBL
Match: A0A5A7TP36 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00680 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.9e-32
Identity = 81/110 (73.64%), Postives = 89/110 (80.91%), Query Frame = 0


Query: 7   RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTP 66
           RGR +STSSKG+  SSS N A SP++ADQYAMDLGFTTVTRS++RSSGIRI S TESSTP
Sbjct: 9   RGRTNSTSSKGNHPSSSSNYALSPLNADQYAMDLGFTTVTRSRSRSSGIRIGSLTESSTP 68

Query: 67  PRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEKCFKNLP 117
           PRPSTNL+CPSGGV QMRP ASP SN E STPP TYSQ V  +K F   P
Sbjct: 69  PRPSTNLICPSGGVVQMRPSASPSSNKEYSTPPTTYSQVVTPDKWFVPRP 118

[Close]

BLAST of PI0006291 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31
Identity = 82/110 (74.55%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 7   RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTP 66
           RGR +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTP
Sbjct: 9   RGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIGSPTESSTP 68

Query: 67  PRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEKCFKNLP 117
           PRPSTNL+ PS GV QMRPPASP SN ESSTPP TYSQAV  +K F   P
Sbjct: 69  PRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRP 118

[Close]

BLAST of PI0006291 vs. ExPASy TrEMBL
Match: A0A5A7UCU9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00040 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31
Identity = 82/112 (73.21%), Postives = 91/112 (81.25%), Query Frame = 0


Query: 6   GRGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESST 65
           GRGR +STSSKG+  SSS N APSPMSA+ YAMDLGFTT+ RS++R  GIRI SPTESST
Sbjct: 8   GRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESST 67

Query: 66  PPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEK--CFKNL 116
           PPR STNL+ PSGG+ QMRPPASP SN ESST P TYSQAV L+K   FKNL
Sbjct: 68  PPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKRDSFKNL 119

[Close]

BLAST of PI0006291 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 3.2e-32
Identity = 82/109 (75.23%), Postives = 90/109 (82.57%), Query Frame = 0


Query: 7   RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTP 66
           RGR +STSSKG+R SSS N  PSPMSADQYAMDLGFTTVTRS++RSS IRI SPTESSTP
Sbjct: 9   RGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIGSPTESSTP 68

Query: 67  PRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEKCFKNL 116
           P+PSTNL+ PSGGV QMR P SP SN +SSTPP TYSQAV  +K  K L
Sbjct: 69  PKPSTNLIRPSGGVVQMRSPVSPSSNRKSSTPPTTYSQAVTPDKRSKLL 117

[Close]

BLAST of PI0006291 vs. NCBI nr
Match: TYK11076.1 (hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 7.1e-32
Identity = 82/110 (74.55%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 7   RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTP 66
           RGR +STSSKG+R SSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTP
Sbjct: 9   RGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTESPTESSTP 68

Query: 67  PRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEKCFKNLP 117
           PRP  NL+ PSG V QMRPPASP SN ESSTPP TYSQAV  +K F   P
Sbjct: 69  PRPLANLIRPSGRVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRP 118

[Close]

BLAST of PI0006291 vs. NCBI nr
Match: KAA0045303.1 (hypothetical protein E6C27_scaffold316G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 146.0 bits (367), Expect = 2.1e-31
Identity = 81/110 (73.64%), Postives = 89/110 (80.91%), Query Frame = 0


Query: 7   RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTP 66
           RGR +STSSKG+  SSS N A SP++ADQYAMDLGFTTVTRS++RSSGIRI S TESSTP
Sbjct: 9   RGRTNSTSSKGNHPSSSSNYALSPLNADQYAMDLGFTTVTRSRSRSSGIRIGSLTESSTP 68

Query: 67  PRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEKCFKNLP 117
           PRPSTNL+CPSGGV QMRP ASP SN E STPP TYSQ V  +K F   P
Sbjct: 69  PRPSTNLICPSGGVVQMRPSASPSSNKEYSTPPTTYSQVVTPDKWFVPRP 118

[Close]

BLAST of PI0006291 vs. NCBI nr
Match: KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-31
Identity = 82/110 (74.55%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 7   RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTP 66
           RGR +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTP
Sbjct: 9   RGRTNSTSSKGNRPPSSSNSAPSPLSADQYAMDLGFTTVTRFISRSFGIWIGSPTESSTP 68

Query: 67  PRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEKCFKNLP 117
           PRPSTNL+ PS GV QMRPPASP SN ESSTPP TYSQAV  +K F   P
Sbjct: 69  PRPSTNLIRPSSGVVQMRPPASPSSNRESSTPPTTYSQAVTPDKRFVPRP 118

[Close]

BLAST of PI0006291 vs. NCBI nr
Match: KAA0051485.1 (hypothetical protein E6C27_scaffold174G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-31
Identity = 82/112 (73.21%), Postives = 91/112 (81.25%), Query Frame = 0


Query: 6   GRGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESST 65
           GRGR +STSSKG+  SSS N APSPMSA+ YAMDLGFTT+ RS++R  GIRI SPTESST
Sbjct: 8   GRGRTNSTSSKGNHPSSSSNSAPSPMSANIYAMDLGFTTIIRSRSRLYGIRIGSPTESST 67

Query: 66  PPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEK--CFKNL 116
           PPR STNL+ PSGG+ QMRPPASP SN ESST P TYSQAV L+K   FKNL
Sbjct: 68  PPRSSTNLIRPSGGIIQMRPPASPSSNRESSTSPTTYSQAVTLDKRDSFKNL 119

The following BLAST results are available for this feature:

BLAST of PI0006291 vs.


Match Name	E-value	Identity	Description

BLAST of PI0006291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U8A0	1.5e-32	75.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CKX1	3.4e-32	74.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TP36	9.9e-32	73.64	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TM80	1.3e-31	74.55	Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7UCU9	1.3e-31	73.21	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0006291 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0049709.1	3.2e-32	75.23	hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]	[more]
TYK11076.1	7.1e-32	74.55	hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]	[more]
KAA0045303.1	2.1e-31	73.64	hypothetical protein E6C27_scaffold316G00680 [Cucumis melo var. makuwa]	[more]
KAA0043136.1	2.7e-31	74.55	putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative...	[more]
KAA0051485.1	2.7e-31	73.21	hypothetical protein E6C27_scaffold174G00040 [Cucumis melo var. makuwa]	[more]

BLAST of PI0006291 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006291.1	PI0006291.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding