PI0006219 (gene) Melon (PI 482460) v1

Overview
NamePI0006219
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 28053129 .. 28054065 (-)
RNA-Seq ExpressionPI0006219
SyntenyPI0006219
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCATCGGTTTGCTCTCACAGGTTGGTCATCTTACGAGTTTAAGCAACAAATCTACTCTCTCTACCCTTGTCTATCTTAGTTCTTTTGTACATATGAAATATATTAGTACATTGATTTTGCCGAGATGCTTCTATTCATGATTTCATGTTATATAGTCAATCATCCAACTGATCTTCTTCTTGAAAACTTTGGGGCTATAGGTTAAAGTTATGTAGCATGCCTATATAGTACTATAGCTCCTATAATTCTCATTAAGGGTGAGTTTGGCCATCCATTTGATAGGAATTGCTACTAGGAAACAATTAATTAGAGTATTAAGGGCATATTAGCAATTAGTTAGAGAAATTGTTAGAGTAGCTTGTTATAAATAGGAGTGCGGAAGGGGAGAGACAAACAGTATATTTATGAGTAATTTAGGCTGTGAGAAATCTCAAGATTGGGAAGGTCCAAATATCCCGAAAACTTGGGGTCGTGCACTTTGTTAAAAGATGTATTATTCCACCAAATAAATTTTCTATACTTAAAAAGAAAAAACTGTTCTTCAAGTAAAAAACCAAGGCAAAAACCAATTTAGCCCTATTATTTTCATCTCTTGAAAGAAAAAAAGAAAAAAGGAACTGTTTCTTTCAGTTCTTTGACTTTAGCCAAAACTTGAACAAAGCAAAAGGAGAAGTTGTATTTAAACAAATTAAACTTATGAAAATAAAAAGTGAAAAATGACAATTTTGGTGTGTTCAAGAACTTTGATTTTGGATGATGTAATTTTGATTCCTCAATTGTTATTTGCAGAGCAAGAAGTCAAAGTAAAGATGCTTCAATCACCAAGAAGTCAGAATGATGTTCTTCAAAGATTCTCCACTAAACCATCCAAAAGTCTATCATCCTCAAAGATGGTAGATAGAAATTGCTTGTTCCGATTCAATTGTTCGTAG

mRNA sequence

ATGAGGCATCGGTTTGCTCTCACAGAGCAAGAAGTCAAAGTAAAGATGCTTCAATCACCAAGAAGTCAGAATGATGTTCTTCAAAGATTCTCCACTAAACCATCCAAAAGTCTATCATCCTCAAAGATGGTAGATAGAAATTGCTTGTTCCGATTCAATTGTTCGTAG

Coding sequence (CDS)

ATGAGGCATCGGTTTGCTCTCACAGAGCAAGAAGTCAAAGTAAAGATGCTTCAATCACCAAGAAGTCAGAATGATGTTCTTCAAAGATTCTCCACTAAACCATCCAAAAGTCTATCATCCTCAAAGATGGTAGATAGAAATTGCTTGTTCCGATTCAATTGTTCGTAG

Protein sequence

MRHRFALTEQEVKVKMLQSPRSQNDVLQRFSTKPSKSLSSSKMVDRNCLFRFNCS
Homology
[Close]
BLAST of PI0006219 vs. ExPASy TrEMBL
Match: A0A0A0LLC8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G252080 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.1e-10
Identity = 42/50 (84.00%), Postives = 42/50 (84.00%), Query Frame = 0 

Query: 1  MRHRFALTEQEVKVKMLQSPRSQNDVLQRFSTKPSKSLSSSKMVDRNCLF 51
          MRHRFALTE EV VKMLQ PRSQN VLQRFSTKP K LSS KMVDRN LF
Sbjct: 1  MRHRFALTEPEVNVKMLQPPRSQN-VLQRFSTKPFKILSSLKMVDRNGLF 49

[Close]
BLAST of PI0006219 vs. NCBI nr
Match: KGN61859.1 (hypothetical protein Csa_006525 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 1.0e-09
Identity = 42/50 (84.00%), Postives = 42/50 (84.00%), Query Frame = 0 

Query: 1  MRHRFALTEQEVKVKMLQSPRSQNDVLQRFSTKPSKSLSSSKMVDRNCLF 51
          MRHRFALTE EV VKMLQ PRSQN VLQRFSTKP K LSS KMVDRN LF
Sbjct: 1  MRHRFALTEPEVNVKMLQPPRSQN-VLQRFSTKPFKILSSLKMVDRNGLF 49

The following BLAST results are available for this feature:
BLAST of PI0006219 vs.
Match NameE-valueIdentityDescription
BLAST of PI0006219 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLC85.1e-1084.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G252080 PE=4 SV=1[more]
BLAST of PI0006219 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61859.11.0e-0984.00hypothetical protein Csa_006525 [Cucumis sativus][more]
BLAST of PI0006219 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0006219.1PI0006219.1mRNA