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PI0006202 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATATTAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTCTGCTTTTTCGTTGGGACTGGTTCTTCTTTCTATATCCTTATTCTATATTCTAGCAAAGGCCCAGTTTGTAGCTGCTGCGCAACTCCTTATTTACGTGGGAGCTATAAATCTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTCTTTCTTTTTTCCGTTGGGAATGGAGTGACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAATCAGATTCTAGAGCAAGATTTCATAAATAATAGTCAACAAATTGGAATTTCTTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTGCCGTGGCTCGCCAGTAA ATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATATTAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTCTGCTTTTTCGTTGGGACTGGTTCTTCTTTCTATATCCTTATTCTATATTCTAGCAAAGGCCCAGTTTGTAGCTGCTGCGCAACTCCTTATTTACGTGGGAGCTATAAATCTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTCTTTCTTTTTTCCGTTGGGAATGGAGTGACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAATCAGATTCTAGAGCAAGATTTCATAAATAATAGTCAACAAATTGGAATTTCTTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTGCCGTGGCTCGCCAGTAA ATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATATTAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTCTGCTTTTTCGTTGGGACTGGTTCTTCTTTCTATATCCTTATTCTATATTCTAGCAAAGGCCCAGTTTGTAGCTGCTGCGCAACTCCTTATTTACGTGGGAGCTATAAATCTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTCTTTCTTTTTTCCGTTGGGAATGGAGTGACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAATCAGATTCTAGAGCAAGATTTCATAAATAATAGTCAACAAATTGGAATTTCTTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTGCCGTGGCTCGCCAGTAA MDLPGPIHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLLSISLFYILAKAQFVAAAQLLIYVGAINLLIIFAVMFMKGSEYSKDFFLFSVGNGVTFLVCTSIFVSLMTTIVDTSWYGIIWTTRSNQILEQDFINNSQQIGISLSTYFFLPFELISIILLAALIGAIAVARQ Homology
BLAST of PI0006202 vs. ExPASy Swiss-Prot
Match: Q2QD38 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhG PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 9.9e-81 Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. ExPASy Swiss-Prot
Match: Q49KU5 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhG PE=3 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 1.9e-68 Identity = 143/176 (81.25%), Postives = 158/176 (89.77%), Query Frame = 0
BLAST of PI0006202 vs. ExPASy Swiss-Prot
Match: Q2L958 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Gossypium hirsutum OX=3635 GN=ndhG PE=3 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 5.7e-68 Identity = 141/176 (80.11%), Postives = 158/176 (89.77%), Query Frame = 0
BLAST of PI0006202 vs. ExPASy Swiss-Prot
Match: Q68RV3 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Panax ginseng OX=4054 GN=ndhG PE=3 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 9.6e-68 Identity = 141/176 (80.11%), Postives = 158/176 (89.77%), Query Frame = 0
BLAST of PI0006202 vs. ExPASy Swiss-Prot
Match: Q0ZIW5 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhG PE=3 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 1.6e-67 Identity = 142/176 (80.68%), Postives = 157/176 (89.20%), Query Frame = 0
BLAST of PI0006202 vs. ExPASy TrEMBL
Match: A0A218KG81 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=ndhG PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.7e-78 Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. ExPASy TrEMBL
Match: A0A1X9Q1H7 (NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhG PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.7e-78 Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. ExPASy TrEMBL
Match: A0A1P8LEC8 (NADH dehydrogenase subunit 6 OS=Citrullus mucosospermus OX=519315 GN=ndhG PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.7e-78 Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. ExPASy TrEMBL
Match: W8E7U1 (NADH-plastoquinone oxidoreductase subunit 6 OS=Cucumis hystrix OX=396994 GN=ndhG PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.7e-78 Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. ExPASy TrEMBL
Match: A0A1P8LFK1 (NADH dehydrogenase subunit 6 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ndhG PE=3 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.7e-78 Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. NCBI nr
Match: YP_009004094.1 (NADH-plastoquinone oxidoreductase subunit 6 [Cucumis hystrix] >YP_009326043.1 NADH dehydrogenase subunit 6 [Citrullus lanatus] >YP_009346530.1 NADH-plastoquinone oxidoreductase subunit 6 [Cucumis x hytivus] >YP_009348085.1 NADH dehydrogenase subunit 6 [Citrullus mucosospermus] >YP_009420848.1 NADH dehydrogenase subunit 6 [Citrullus colocynthis] >YP_009431610.1 NADH dehydrogenase subunit 6 [Citrullus amarus] >YP_009431696.1 NADH dehydrogenase subunit 6 [Citrullus rehmii] >Q2QD38.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit 6; AltName: Full=NADH-plastoquinone oxidoreductase subunit 6 [Cucumis sativus] >ALF03354.1 NADH dehydrogenase subunit 6 [Cucumis sativus var. hardwickii] >APW82516.1 NADH dehydrogenase subunit 6 [Citrullus lanatus subsp. vulgaris] >ASY96396.1 NADH dehydrogenase subunit 6 [Cucumis melo subsp. agrestis] >AVE15385.1 NdhG [Cucumis sativus var. sativus] >QZL38648.1 NADH dehydrogenase subunit G [Citrullus naudinianus] >QZL38736.1 NADH dehydrogenase subunit G [Citrullus ecirrhosus]) HSP 1 Score: 300.8 bits (769), Expect = 7.6e-78 Identity = 167/176 (94.89%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. NCBI nr
Match: YP_009456200.1 (NADH dehydrogenase subunit 6 [Lagenaria siceraria] >AUJ21965.1 NADH dehydrogenase subunit 6 [Lagenaria siceraria] >QNM38585.1 NADH-plastoquinone oxidoreductase subunit 6 [Lagenaria siceraria var. microcarpa]) HSP 1 Score: 300.4 bits (768), Expect = 9.9e-78 Identity = 166/176 (94.32%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. NCBI nr
Match: QHB76018.1 (NADH dehydrogenase subunit 6 [Cucumis melo subsp. melo]) HSP 1 Score: 300.1 bits (767), Expect = 1.3e-77 Identity = 166/176 (94.32%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. NCBI nr
Match: YP_010131145.1 (NADH-plastoquinone oxidoreductase subunit 6 [Benincasa hispida] >QPZ75793.1 NADH-plastoquinone oxidoreductase subunit 6 [Benincasa hispida] >QSQ72364.1 NADH dehydrogenase subunit G [Benincasa hispida]) HSP 1 Score: 300.1 bits (767), Expect = 1.3e-77 Identity = 166/176 (94.32%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. NCBI nr
Match: YP_009317439.1 (NADH dehydrogenase subunit 6 [Coccinia grandis] >AOX48754.1 NADH dehydrogenase subunit 6 [Coccinia grandis] >AOX48839.1 NADH dehydrogenase subunit 6 [Coccinia grandis]) HSP 1 Score: 299.7 bits (766), Expect = 1.7e-77 Identity = 166/176 (94.32%), Postives = 172/176 (97.73%), Query Frame = 0
BLAST of PI0006202 vs. TAIR 10
Match: ATCG01080.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 ) HSP 1 Score: 242.3 bits (617), Expect = 3.0e-64 Identity = 132/176 (75.00%), Postives = 153/176 (86.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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