PI0006165 (gene) Melon (PI 482460) v1

Overview
NamePI0006165
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 21363828 .. 21364214 (+)
RNA-Seq ExpressionPI0006165
SyntenyPI0006165
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGAAAACGAGCAATTCATAACTCTCTGAATTTGCCAGTTCCATTTGGCTGCAACAAGCCCAAGCCCAAGCCCAAAAGTTACTTGAGCAATCAACGTAGAGTAGAGAAGACTATAACCACTGTTTACAAAGATGAGGTTGTTGGAGGATCAAGTGTAGAGTTTTCGAAGAGGCAAAAGGTGAAGGAATTTGTGGACAAAAACACTGGACGTTTGAGTTCTAAAGAAGAGATTACTTATAAGTGTAGTATGAAGGTTGATGATGGTGTTCATGAATTTGTTAATGAGGTTCAAACTCAAGTGAAGTTTAAGAAAGTTCCAACCTCTACTAAGAATAATAGTTCCATGAAAGCTACTAATAAGCATATTATGTTTGATTTCTAA

mRNA sequence

ATGGGAGGAAAACGAGCAATTCATAACTCTCTGAATTTGCCAGTTCCATTTGGCTGCAACAAGCCCAAGCCCAAGCCCAAAAGTTACTTGAGCAATCAACGTAGAGTAGAGAAGACTATAACCACTGTTTACAAAGATGAGGTTGTTGGAGGATCAAGTGTAGAGTTTTCGAAGAGGCAAAAGGTGAAGGAATTTGTGGACAAAAACACTGGACGTTTGAGTTCTAAAGAAGAGATTACTTATAAGTGTAGTATGAAGGTTGATGATGGTGTTCATGAATTTGTTAATGAGGTTCAAACTCAAGTGAAGTTTAAGAAAGTTCCAACCTCTACTAAGAATAATAGTTCCATGAAAGCTACTAATAAGCATATTATGTTTGATTTCTAA

Coding sequence (CDS)

ATGGGAGGAAAACGAGCAATTCATAACTCTCTGAATTTGCCAGTTCCATTTGGCTGCAACAAGCCCAAGCCCAAGCCCAAAAGTTACTTGAGCAATCAACGTAGAGTAGAGAAGACTATAACCACTGTTTACAAAGATGAGGTTGTTGGAGGATCAAGTGTAGAGTTTTCGAAGAGGCAAAAGGTGAAGGAATTTGTGGACAAAAACACTGGACGTTTGAGTTCTAAAGAAGAGATTACTTATAAGTGTAGTATGAAGGTTGATGATGGTGTTCATGAATTTGTTAATGAGGTTCAAACTCAAGTGAAGTTTAAGAAAGTTCCAACCTCTACTAAGAATAATAGTTCCATGAAAGCTACTAATAAGCATATTATGTTTGATTTCTAA

Protein sequence

MGGKRAIHNSLNLPVPFGCNKPKPKPKSYLSNQRRVEKTITTVYKDEVVGGSSVEFSKRQKVKEFVDKNTGRLSSKEEITYKCSMKVDDGVHEFVNEVQTQVKFKKVPTSTKNNSSMKATNKHIMFDF
Homology
BLAST of PI0006165 vs. ExPASy TrEMBL
Match: A0A5A7UT05 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006480 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 4.4e-49
Identity = 107/129 (82.95%), Postives = 113/129 (87.60%), Query Frame = 0

Query: 1   MGGKRAIHNSLNLPVPFGCNKPKPKPKSYLSNQRRVEKTITTVYKDEVVGGSSVEFSKRQ 60
           MGGKRAIH SL LPVP GC+    KPK + +NQR +EKTITTV K EVVGGSSVEFSKRQ
Sbjct: 1   MGGKRAIHTSLKLPVPLGCS----KPKKHSTNQRGMEKTITTVNKYEVVGGSSVEFSKRQ 60

Query: 61  KVKEFVDKNTGRLSSKEEITYKCSMKVDDGVHEFVNEVQTQVKFKKV-PTSTKNNSSMKA 120
           KVKEFVDKNTGRLSSKEE+TYKCSMKVDDG H FV+EVQTQVKFKKV PTS KNNSSMKA
Sbjct: 61  KVKEFVDKNTGRLSSKEEVTYKCSMKVDDGAHGFVDEVQTQVKFKKVIPTSAKNNSSMKA 120

Query: 121 TNKHIMFDF 129
           TNKHIMFDF
Sbjct: 121 TNKHIMFDF 125

BLAST of PI0006165 vs. ExPASy TrEMBL
Match: A0A5D3CE69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00950 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.2e-48
Identity = 106/129 (82.17%), Postives = 112/129 (86.82%), Query Frame = 0

Query: 1   MGGKRAIHNSLNLPVPFGCNKPKPKPKSYLSNQRRVEKTITTVYKDEVVGGSSVEFSKRQ 60
           MGGKRAIH SL LPVP GC+    KPK + +NQR +EKTITTV K EVVGGSSVEFSKRQ
Sbjct: 1   MGGKRAIHTSLKLPVPLGCS----KPKKHSTNQRGMEKTITTVNKYEVVGGSSVEFSKRQ 60

Query: 61  KVKEFVDKNTGRLSSKEEITYKCSMKVDDGVHEFVNEVQTQVKFKKV-PTSTKNNSSMKA 120
           KVKEFVDKNTGRLSSKEE+TYKCSMKVDDG H FV+EVQTQVKFKKV PTS KNNSSMKA
Sbjct: 61  KVKEFVDKNTGRLSSKEEVTYKCSMKVDDGAHGFVDEVQTQVKFKKVIPTSAKNNSSMKA 120

Query: 121 TNKHIMFDF 129
           TNKHIM DF
Sbjct: 121 TNKHIMLDF 125

BLAST of PI0006165 vs. ExPASy TrEMBL
Match: A0A7N2KV08 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.2e-08
Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 0

Query: 27  KSYLSNQRRVEKTITTVYKDEVVGGSSVEFSKRQKVKEFVDKNTGRLSSKEEITYKCSMK 86
           K  ++    +EK+  T+YKD+     S +F+K  K +EFVDK++GRL  KE++TYK + K
Sbjct: 23  KRKMNESSELEKSSRTIYKDK-HSAYSEQFTKHHKAEEFVDKDSGRLGFKEQVTYKSTHK 82

Query: 87  VDDGVHEFVNEVQTQVKFKKVPTSTKNNSSMKATN 122
           V+D V     E +TQVKFKK     K+ S     N
Sbjct: 83  VNDKVQGSTTEYETQVKFKKTVYPKKSASKCNYNN 116

BLAST of PI0006165 vs. ExPASy TrEMBL
Match: A0A2N9HEB2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37893 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 0

Query: 15  VPFGCNKPKPKPKSYLSNQRRVEKTITTVYKDEVVGGSSVEFSKRQKVKEFVDKNTGRLS 74
           VP        K +  ++    VE++  T+YKD+   G S  FS + K +EFVDK++GRL 
Sbjct: 8   VPASIAGSSSKSRKMVNESNEVERSSRTMYKDK-YSGCSNHFSTQHKAEEFVDKHSGRLG 67

Query: 75  SKEEITYKCSMKVDDGVHEFVNEVQTQVKFKKVPTSTKN 114
            K+E+ Y  + KV D V ++  E +TQVKFKK     +N
Sbjct: 68  LKDEVKYTSTHKVVDKVVDYTTEYKTQVKFKKTVYPQQN 105

BLAST of PI0006165 vs. ExPASy TrEMBL
Match: A0A2N9HEM9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37896 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 0

Query: 15  VPFGCNKPKPKPKSYLSNQRRVEKTITTVYKDEVVGGSSVEFSKRQKVKEFVDKNTGRLS 74
           VP        K +  ++    VE++  T+YKD+   G S  FS + K +EFVDK++GRL 
Sbjct: 8   VPASIAGSSSKSRKMVNESNEVERSSRTMYKDK-YSGCSNHFSTQHKAEEFVDKHSGRLG 67

Query: 75  SKEEITYKCSMKVDDGVHEFVNEVQTQVKFKKVPTSTKN 114
            K+E+ Y  + KV D V ++  E +TQVKFKK     +N
Sbjct: 68  LKDEVKYTSTHKVVDKVVDYTTEYKTQVKFKKTVYPQQN 105

BLAST of PI0006165 vs. NCBI nr
Match: KAA0058314.1 (hypothetical protein E6C27_scaffold274G006480 [Cucumis melo var. makuwa])

HSP 1 Score: 203.8 bits (517), Expect = 9.2e-49
Identity = 107/129 (82.95%), Postives = 113/129 (87.60%), Query Frame = 0

Query: 1   MGGKRAIHNSLNLPVPFGCNKPKPKPKSYLSNQRRVEKTITTVYKDEVVGGSSVEFSKRQ 60
           MGGKRAIH SL LPVP GC+    KPK + +NQR +EKTITTV K EVVGGSSVEFSKRQ
Sbjct: 1   MGGKRAIHTSLKLPVPLGCS----KPKKHSTNQRGMEKTITTVNKYEVVGGSSVEFSKRQ 60

Query: 61  KVKEFVDKNTGRLSSKEEITYKCSMKVDDGVHEFVNEVQTQVKFKKV-PTSTKNNSSMKA 120
           KVKEFVDKNTGRLSSKEE+TYKCSMKVDDG H FV+EVQTQVKFKKV PTS KNNSSMKA
Sbjct: 61  KVKEFVDKNTGRLSSKEEVTYKCSMKVDDGAHGFVDEVQTQVKFKKVIPTSAKNNSSMKA 120

Query: 121 TNKHIMFDF 129
           TNKHIMFDF
Sbjct: 121 TNKHIMFDF 125

BLAST of PI0006165 vs. NCBI nr
Match: TYK09494.1 (hypothetical protein E5676_scaffold499G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 201.4 bits (511), Expect = 4.5e-48
Identity = 106/129 (82.17%), Postives = 112/129 (86.82%), Query Frame = 0

Query: 1   MGGKRAIHNSLNLPVPFGCNKPKPKPKSYLSNQRRVEKTITTVYKDEVVGGSSVEFSKRQ 60
           MGGKRAIH SL LPVP GC+    KPK + +NQR +EKTITTV K EVVGGSSVEFSKRQ
Sbjct: 1   MGGKRAIHTSLKLPVPLGCS----KPKKHSTNQRGMEKTITTVNKYEVVGGSSVEFSKRQ 60

Query: 61  KVKEFVDKNTGRLSSKEEITYKCSMKVDDGVHEFVNEVQTQVKFKKV-PTSTKNNSSMKA 120
           KVKEFVDKNTGRLSSKEE+TYKCSMKVDDG H FV+EVQTQVKFKKV PTS KNNSSMKA
Sbjct: 61  KVKEFVDKNTGRLSSKEEVTYKCSMKVDDGAHGFVDEVQTQVKFKKVIPTSAKNNSSMKA 120

Query: 121 TNKHIMFDF 129
           TNKHIM DF
Sbjct: 121 TNKHIMLDF 125

BLAST of PI0006165 vs. NCBI nr
Match: KAG6587772.1 (hypothetical protein SDJN03_16337, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.0 bits (380), Expect = 7.0e-33
Identity = 83/133 (62.41%), Postives = 96/133 (72.18%), Query Frame = 0

Query: 1   MGGKRAIH--NSLNLPVPFGCNKP---KPKPKSYLSNQRRVEKTITTVYKDEVVGGSSVE 60
           MGGKRA+H      L VP  CNKP   KP  K   +N+R  EKT TTVYK+E+ GG +V+
Sbjct: 113 MGGKRAVHYYEMTELEVPLSCNKPKLAKPGAKRASTNRRGAEKTTTTVYKNELPGGLTVQ 172

Query: 61  FSKRQKVKEFVDKNTGRLSSKEEITYKCSMKVDDGVHEFVNEVQTQVKFKKVPTSTKNNS 120
            SKR KVKEFVD N+GRLSSKEE+TYK S KVD+ V    NEVQTQVKFKK P+S  +N+
Sbjct: 173 VSKRHKVKEFVDNNSGRLSSKEEVTYKSSFKVDNAVQGIFNEVQTQVKFKKAPSS--SNN 232

Query: 121 SMKATNKHIMFDF 129
           S K TNKHIMFDF
Sbjct: 233 STKPTNKHIMFDF 243

BLAST of PI0006165 vs. NCBI nr
Match: KAF3944350.1 (hypothetical protein CMV_029177 [Castanea mollissima])

HSP 1 Score: 70.9 bits (172), Expect = 9.3e-09
Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 0

Query: 31  SNQRRV------EKTITTVYKDEVVGGSSVEFSKRQKVKEFVDKNTGRLSSKEEITYKCS 90
           SN+R+V      EK+   +YKD+  G  S +F+K  K +EFVDK++GRL  KE++TYK +
Sbjct: 21  SNKRKVNESSDLEKSSRIIYKDK-HGAYSEQFTKHHKAEEFVDKHSGRLGFKEQVTYKST 80

Query: 91  MKVDDGVHEFVNEVQTQVKFKKVPTSTKNNSSMKAT-NKHIMFD 128
            KV+D V     E +TQVKFKK     K+ S  K   N  I +D
Sbjct: 81  HKVNDKVQGSTTEYETQVKFKKTVYPNKSASKSKCNYNNAIYYD 123

BLAST of PI0006165 vs. NCBI nr
Match: XP_030956139.1 (uncharacterized protein LOC115978256 [Quercus lobata] >XP_030956140.1 uncharacterized protein LOC115978256 [Quercus lobata])

HSP 1 Score: 68.6 bits (166), Expect = 4.6e-08
Identity = 39/95 (41.05%), Postives = 56/95 (58.95%), Query Frame = 0

Query: 27  KSYLSNQRRVEKTITTVYKDEVVGGSSVEFSKRQKVKEFVDKNTGRLSSKEEITYKCSMK 86
           K  ++    +EK+  T+YKD+     S +F+K  K +EFVDK++GRL  KE++TYK + K
Sbjct: 23  KRKMNESSELEKSSRTIYKDK-HSAYSEQFTKHHKAEEFVDKDSGRLGFKEQVTYKSTHK 82

Query: 87  VDDGVHEFVNEVQTQVKFKKVPTSTKNNSSMKATN 122
           V+D V     E +TQVKFKK     K+ S     N
Sbjct: 83  VNDKVQGSTTEYETQVKFKKTVYPKKSASKCNYNN 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UT054.4e-4982.95Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CE692.2e-4882.17Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A7N2KV082.2e-0841.05Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A2N9HEB21.4e-0738.38Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37893 PE=4 SV=1[more]
A0A2N9HEM91.4e-0738.38Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37896 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0058314.19.2e-4982.95hypothetical protein E6C27_scaffold274G006480 [Cucumis melo var. makuwa][more]
TYK09494.14.5e-4882.17hypothetical protein E5676_scaffold499G00950 [Cucumis melo var. makuwa][more]
KAG6587772.17.0e-3362.41hypothetical protein SDJN03_16337, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF3944350.19.3e-0943.27hypothetical protein CMV_029177 [Castanea mollissima][more]
XP_030956139.14.6e-0841.05uncharacterized protein LOC115978256 [Quercus lobata] >XP_030956140.1 uncharacte... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0006165.1PI0006165.1mRNA