PI0006085 (gene) Melon (PI 482460) v1

Overview
NamePI0006085
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Description23 kDa jasmonate-induced protein-like
Locationchr05: 6051532 .. 6053259 (-)
RNA-Seq ExpressionPI0006085
SyntenyPI0006085
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGAAATGTGTATAGCAAAGCAGTGACAGAATCAACCGTAAGGAGGTAACGAGGACTTTACATCACGGGCAAGGTGATCACTCGCAACAACATGGCATCAATGGCAATAGCGTTGAAGAACACGCAAGGGAAGGAGGAAGAAGAAGAGAAAGAAGCGTTAAGTACACGCAAAGGCTACAGGCTCGATACGAGCGAGAGTTAGGTGGGTTCATGCAGGGGTGGATCTACAATGCCACGGACAGCGCCATAACGCTTGTCGATTGCCGCGATTGGGGAGGAGACTTGGTTTCAAACCCTTACTCTCGTAAAATTGACAATGGGCAATGGGGAATGTTCATCCATAAACATATATTTGGATCCTGCTGGTTCTTGTGGTGGGGTTTTGTATAAAAGTTTGAATAATGATGGGATTATTTGCTACTGGTGTATTGCTTGGACCAATAGTAACTCCCCACCTGGACAAATCCAAACAACGGTAAGTTTTTCTCCTCAACTTTTAAATTTGTATATAATAGATTTATATGATTTTTTTTCCATTTTTGTGTCCTTAGTAATTCCTTGAGCTATTTAATTTTTAAAAAGAAATTATAGATTTTACTGGATGATAATAAAAAAAGTTTAATTAGGGTTTTGTTATATCAATTAATTGAATATATGCACGTGTAATAGGAGACTAAGATACTAGTATAATGTATGTACTCTTGACTAAAAGGTTTGAGGGTTTAAATCCTTTGCACTTATGTTGAATTTTTTATAAATACAACTTGAAAATTTGGACTAGACTTATAATTCAACCGATTATTCTATCTTTGCGGTTAATTTTGGAATTATCTTATGAATGATTGTGAAATTAATTAATATATACATTTAGTCTCTTGGGATTAAAATACTCAGTCAAGAGTAGACCTAGATGTTATTTTATATTGGAGGGGCATAACAAATAATTATACTATAAGAATATAGTAAAAGAAATTGTCAAATTTTGGGGATGCAATTAGTAAAGTCTCACAACAGTTGGAAAAGAGATAGTATTATAAATGATAAAATGACCATGCTCATTATTGTGAGATATTATTTGGATGAACCAAAAAGTAGATCCATGAATCCAAAGTGATCAACAATAGTAATATTTCTCTGTTAGTAAGAACTAGCTAGTCACTCACTACTAAAATTTTGGATCATAAATGAGTAGGATGGTTTTAAAAAATATTTAAAATTTTGGATCATAAATGAGTAGTAATATTTCAATTGACATACATCATTTGTTGTACTAAAAAGGAAACAATAGTATTAATATTACCCATTATGCAGGTACACCTAAAGCTAATAGGTGAGGTTGATTGGGAGGATAGTTGTTGGGAAAGAGTTTGTAATGCAATTCAAGAGAATAATATCCTACATAAGGCTGACAATGAAGGAATGTATTCAATCATCACAGCCTCCAGTGGCCCTTATGCTTCCTTTGAAGCATTTCTCACTCTTCAATAACATTCTTCAACGTCTCTTCACTCACGTTGCATATTCATTTTTCTCATTTCCCACATTTATCCATTCCATCTACTTTCATTTGCAATTTATGCTTTAAACAAAATTAAGCCTTGAATTCCATATTATTGTATTATTATATTAATATTCTCGTGTTGTTAATAAATAAAATTTCAATCTATCAATATGAATGTAATCCAACTAATATAAACTTGTACTATCAATTCTCGAAGTTAAAGTTCG

mRNA sequence

CCGAAATGTGTATAGCAAAGCAGTGACAGAATCAACCGTAAGGAGGTAACGAGGACTTTACATCACGGGCAAGGTGATCACTCGCAACAACATGGCATCAATGGCAATAGCGTTGAAGAACACGCAAGGGAAGGAGGAAGAAGAAGAGAAAGAAGCGTTAAGTACACGCAAAGGCTACAGGCTCGATACGAGCGAGAGTTAGGTGGGTTCATGCAGGGGTGGATCTACAATGCCACGGACAGCGCCATAACGCTTGTCGATTGCCGCGATTGGGGAGGAGACTTGGTTTCAAACCCTTACTCTCGTAAAATTGACAATGGGCAATGGGGAATGTTCATCCATAAACATATATTTGGATCCTGCTGGTTCTTGTGGTGGGGTTTTGTATAAAAGTTTGAATAATGATGGGATTATTTGCTACTGGTGTATTGCTTGGACCAATAGTAACTCCCCACCTGGACAAATCCAAACAACGGTACACCTAAAGCTAATAGGTGAGGTTGATTGGGAGGATAGTTGTTGGGAAAGAGTTTGTAATGCAATTCAAGAGAATAATATCCTACATAAGGCTGACAATGAAGGAATGTATTCAATCATCACAGCCTCCAGTGGCCCTTATGCTTCCTTTGAAGCATTTCTCACTCTTCAATAACATTCTTCAACGTCTCTTCACTCACGTTGCATATTCATTTTTCTCATTTCCCACATTTATCCATTCCATCTACTTTCATTTGCAATTTATGCTTTAAACAAAATTAAGCCTTGAATTCCATATTATTGTATTATTATATTAATATTCTCGTGTTGTTAATAAATAAAATTTCAATCTATCAATATGAATGTAATCCAACTAATATAAACTTGTACTATCAATTCTCGAAGTTAAAGTTCG

Coding sequence (CDS)

ATGGGCAATGGGGAATGTTCATCCATAAACATATATTTGGATCCTGCTGGTTCTTGTGGTGGGGTTTTGTATAAAAGTTTGAATAATGATGGGATTATTTGCTACTGGTGTATTGCTTGGACCAATAGTAACTCCCCACCTGGACAAATCCAAACAACGGTACACCTAAAGCTAATAGGTGAGGTTGATTGGGAGGATAGTTGTTGGGAAAGAGTTTGTAATGCAATTCAAGAGAATAATATCCTACATAAGGCTGACAATGAAGGAATGTATTCAATCATCACAGCCTCCAGTGGCCCTTATGCTTCCTTTGAAGCATTTCTCACTCTTCAATAA

Protein sequence

MGNGECSSINIYLDPAGSCGGVLYKSLNNDGIICYWCIAWTNSNSPPGQIQTTVHLKLIGEVDWEDSCWERVCNAIQENNILHKADNEGMYSIITASSGPYASFEAFLTLQ
Homology
[Close]
BLAST of PI0006085 vs. ExPASy TrEMBL
Match: A0A6P4B4M0 (23 kDa jasmonate-induced protein-like OS=Ziziphus jujuba OX=326968 GN=LOC107427512 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 8.4e-04
Identity = 26/96 (27.08%), Postives = 44/96 (45.83%), Query Frame = 0 

Query: 16  AGSCGGVLYKSLNNDGIICYWCIAWTNSNSPPGQIQTTVHLKLIGEVDWEDSCWERVCNA 75
           +GS GGV+Y+  N D   C W +AW N       +        + E++  +  W  +   
Sbjct: 130 SGSVGGVVYRGKNGDDADCDWLVAWNNPTDKNKWVNRA--YTEVREINHFNGIWNAIHGR 189

Query: 76  IQENNILHKADNEGMYSIITASSGPYASFEAFLTLQ 112
           +  + +  K+++ G  S  +  S  +A F A LTLQ
Sbjct: 190 MDASGVHSKSESHGCLSYASIGSDRFAIFRAILTLQ 223

[Close]
BLAST of PI0006085 vs. NCBI nr
Match: XP_038889583.1 (23 kDa jasmonate-induced protein-like [Benincasa hispida])

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-08
Identity = 34/95 (35.79%), Postives = 53/95 (55.79%), Query Frame = 0 

Query: 18  SCGGVLYKSLNN-DGIICYWCIAWTNSNSPPGQIQTTVHLKLIGEVDWEDSCWERVCNAI 77
           S G V+Y+  +  +    YWC+AW N +         VH+K+  +VDW ++ W  V  A+
Sbjct: 123 SSGAVVYEGFDYLNSTTSYWCVAWKNISR---LSSAQVHVKIGRDVDWCENEWNNVYKAL 182

Query: 78  QENNILHKADNEGMYSIITASSGPYASFEAFLTLQ 112
           +    LH+   EG  S+I+AS GP+  FEA LT++
Sbjct: 183 ERCGSLHRTKEEGWRSVISASPGPHVVFEALLTMK 214

[Close]
BLAST of PI0006085 vs. NCBI nr
Match: XP_038891763.1 (23 kDa jasmonate-induced protein-like [Benincasa hispida])

HSP 1 Score: 54.3 bits (129), Expect = 7.8e-04
Identity = 30/95 (31.58%), Postives = 42/95 (44.21%), Query Frame = 0 

Query: 17  GSCGGVLYKSLNNDGIICYWCIAWTNS-NSPPGQIQTTVHLKLIGEVDWEDSCWERVCNA 76
           GS    +Y+ LNN+G+IC W  AW+N  N           ++  G    ED  W  + N 
Sbjct: 117 GSSAACVYRGLNNNGMICDWMAAWSNPWNRSASDNTAYTEIREEGHYTKEDH-WNYISNL 176

Query: 77  IQENNILHKADNEGMYSIITASSGPYASFEAFLTL 111
           +  + + H  D  G  S +T  S     FEA  TL
Sbjct: 177 LYNSGLSHSDDWNGCISNVTTGSDTSPIFEAIYTL 210

The following BLAST results are available for this feature:
BLAST of PI0006085 vs.
Match NameE-valueIdentityDescription
BLAST of PI0006085 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6P4B4M08.4e-0427.0823 kDa jasmonate-induced protein-like OS=Ziziphus jujuba OX=326968 GN=LOC1074275... [more]
BLAST of PI0006085 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038889583.11.4e-0835.7923 kDa jasmonate-induced protein-like [Benincasa hispida][more]
XP_038891763.17.8e-0431.5823 kDa jasmonate-induced protein-like [Benincasa hispida][more]
BLAST of PI0006085 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0006085.1PI0006085.1mRNA